RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 GCGP01275 180 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 TYMSP04818 313 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 PKD1P98161 4303 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 RNF212Q495C1 297 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 PRNTQ86SH4 94 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 Q86TA4 180 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 FAM213BQ8TBF2 198 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 VSIG2Q96IQ7 327 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 NDFIP1Q9BT67 221 aa7.65□□□□□ -1.18
SHKBP1-206ENST00000595523 hCG_2014768A0A024R1R8 64 aa7.64□□□□□ -1.19
SHKBP1-206ENST00000595523 TRGV11A0A075B6L2 103 aa7.64□□□□□ -1.19
SHKBP1-206ENST00000595523 IFNA7P01567 189 aa7.64□□□□□ -1.19
SHKBP1-206ENST00000595523 C1QBP02746 253 aa7.64□□□□□ -1.19
SHKBP1-206ENST00000595523 PFN1P07737 140 aaKnown RBP7.64□□□□□ -1.19
SHKBP1-206ENST00000595523 TPT1P13693 172 aaKnown RBP7.64□□□□□ -1.19
SHKBP1-206ENST00000595523 UBE2DNLQ8IWF7 75 aa7.64□□□□□ -1.19
SHKBP1-206ENST00000595523 SFT2D1Q8WV19 159 aa7.64□□□□□ -1.19
SHKBP1-206ENST00000595523 NKX6-2Q9C056 277 aaPredicted RBP7.64□□□□□ -1.19
SHKBP1-206ENST00000595523 ARL2-SNX15V9GYD0 113 aa7.64□□□□□ -1.19
SHKBP1-206ENST00000595523 IGLV2-18A0A075B6J9 118 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 A0A1B0GV50 99 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 FBLL1A6NHQ2 334 aaKnown RBP7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 H3BNG1 76 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 PAGE4O60829 102 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 IGHV3-53P01767 116 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 EIF5AP63241 154 aaKnown RBP7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 SMUG1Q53HV7 270 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 DPPA3Q6W0C5 159 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 Q6ZR54 194 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 RASL10AQ92737 203 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 HIST1H2BAQ96A08 127 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 SPXQ9BT56 116 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 SDF2L1Q9HCN8 221 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 LINC00588Q9Y4M8 146 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 PKHD1P08F94 4074 aa7.63□□□□□ -1.19
SHKBP1-206ENST00000595523 M0R2N4 97 aa7.62□□□□□ -1.19
SHKBP1-206ENST00000595523 SFTA3P0C7M3 94 aa7.62□□□□□ -1.19
SHKBP1-206ENST00000595523 FHL2Q14192 279 aa7.62□□□□□ -1.19
SHKBP1-206ENST00000595523 ZFP69Q49AA0 526 aa7.62□□□□□ -1.19
SHKBP1-206ENST00000595523 SAPCD1Q5SSQ6 148 aa7.62□□□□□ -1.19
SHKBP1-206ENST00000595523 CST9LP1Q5W188 147 aa7.62□□□□□ -1.19
SHKBP1-206ENST00000595523 AKAP14Q86UN6 197 aa7.62□□□□□ -1.19
SHKBP1-206ENST00000595523 ZNRF2Q8NHG8 242 aa7.62□□□□□ -1.19
SHKBP1-206ENST00000595523 KCNS1Q96KK3 526 aa7.62□□□□□ -1.19
SHKBP1-206ENST00000595523 A0A096LPF7 62 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 A0A1B0GVG6 124 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 M0R2P5 195 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 H2AFB1P0C5Y9 115 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 CRIP1P50238 77 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 PPT1P50897 306 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 FAM3BP58499 235 aaPredicted RBP7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 CCL20P78556 96 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 COX8CQ7Z4L0 72 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 C9orf62Q8N4C0 152 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 ZC2HC1AQ96GY0 325 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 ZNF479Q96JC4 524 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 C9orf85Q96MD7 179 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 TCEAL7Q9BRU2 100 aa7.61□□□□□ -1.19
SHKBP1-206ENST00000595523 IGKV3D-20A0A0C4DH25 116 aa7.6□□□□□ -1.19
SHKBP1-206ENST00000595523 TRBV6-1A0A0K0K1D8 114 aa7.6□□□□□ -1.19
SHKBP1-206ENST00000595523 RTL8CO15255 209 aa7.6□□□□□ -1.19
SHKBP1-206ENST00000595523 RNASE3P12724 160 aaKnown RBP7.6□□□□□ -1.19
SHKBP1-206ENST00000595523 CRYBA4P53673 196 aa7.6□□□□□ -1.19
SHKBP1-206ENST00000595523 ESRGQ1W209 222 aa7.6□□□□□ -1.19
SHKBP1-206ENST00000595523 ZNF575Q86XF7 245 aa7.6□□□□□ -1.19
SHKBP1-206ENST00000595523 FMC1Q96HJ9 113 aa7.6□□□□□ -1.19
SHKBP1-206ENST00000595523 DNAH11Q96DT5 4516 aa7.59□□□□□ -1.19
SHKBP1-206ENST00000595523 TRAV1-1A0A0B4J248 108 aa7.59□□□□□ -1.19
SHKBP1-206ENST00000595523 SCO2A0A1W2PP80 73 aa7.59□□□□□ -1.19
SHKBP1-206ENST00000595523 PAX4O43316 350 aa7.59□□□□□ -1.19
SHKBP1-206ENST00000595523 LTAP01374 205 aa7.59□□□□□ -1.19
SHKBP1-206ENST00000595523 AKR1C3P42330 323 aa7.59□□□□□ -1.19
SHKBP1-206ENST00000595523 SULT1A2P50226 295 aa7.59□□□□□ -1.19
SHKBP1-206ENST00000595523 CCL18P55774 89 aa7.59□□□□□ -1.19
SHKBP1-206ENST00000595523 SLC51BQ86UW2 128 aa7.59□□□□□ -1.19
SHKBP1-206ENST00000595523 PRO0255Q9UI72 69 aa7.59□□□□□ -1.19
SHKBP1-206ENST00000595523 HHLA3Q9XRX5 114 aa7.59□□□□□ -1.19
SHKBP1-206ENST00000595523 ZFP30Q9Y2G7 519 aa7.59□□□□□ -1.19
SHKBP1-206ENST00000595523 TRAV4A0A0B4J268 109 aa7.58□□□□□ -1.2
SHKBP1-206ENST00000595523 PGPEP1LA6NFU8 196 aa7.58□□□□□ -1.2
SHKBP1-206ENST00000595523 FABP5P3A8MUU1 101 aa7.58□□□□□ -1.2
SHKBP1-206ENST00000595523 RAB5CP51148 216 aa7.58□□□□□ -1.2
SHKBP1-206ENST00000595523 UBE2G1P62253 170 aa7.58□□□□□ -1.2
SHKBP1-206ENST00000595523 NHLRC2Q8NBF2 726 aa7.58□□□□□ -1.2
SHKBP1-206ENST00000595523 TRGV4A0A0C4DH28 118 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 NBDYA0A0U1RRE5 68 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 C9JCJ5 164 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 SH2D1AO60880 128 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 SLAQ13239 276 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 ZNF674Q2M3X9 581 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 ZNF876PQ49A33 203 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 ZNF506Q5JVG8 444 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 EIF5AL1Q6IS14 154 aaKnown RBP7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 OR4C5Q8NGB2 326 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 UPK3BQ9BT76 320 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 KRTAP1-5Q9BYS1 174 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 GNG13Q9P2W3 67 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 MRPS16Q9Y3D3 137 aaKnown RBP7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 ICOSQ9Y6W8 199 aa7.57□□□□□ -1.2
SHKBP1-206ENST00000595523 B4DEV8 164 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms