RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SAA4P35542 130 aa10.07□□□□□ -0.8
VRK3-209ENST00000594948 RPL32P62910 135 aaKnown RBP10.07□□□□□ -0.8
VRK3-209ENST00000594948 PRR9Q5T870 116 aa10.07□□□□□ -0.8
VRK3-209ENST00000594948 APRG1Q8IVJ8 170 aa10.07□□□□□ -0.8
VRK3-209ENST00000594948 ZFAND2AQ8N6M9 145 aa10.07□□□□□ -0.8
VRK3-209ENST00000594948 POM121L12Q8N7R1 296 aa10.07□□□□□ -0.8
VRK3-209ENST00000594948 RASL10AQ92737 203 aa10.07□□□□□ -0.8
VRK3-209ENST00000594948 ANKHD1Q8IWZ3 2542 aaKnown RBP10.07□□□□□ -0.8
VRK3-209ENST00000594948 BRI3O95415 125 aa10.07□□□□□ -0.8
VRK3-209ENST00000594948 ASIPP42127 132 aa10.07□□□□□ -0.8
VRK3-209ENST00000594948 CD300EQ496F6 205 aaPredicted RBP10.07□□□□□ -0.8
VRK3-209ENST00000594948 SAMD13Q5VXD3 122 aa10.07□□□□□ -0.8
VRK3-209ENST00000594948 OR10J6PQ8NGY7 276 aa10.07□□□□□ -0.8
VRK3-209ENST00000594948 FAM19A4Q96LR4 140 aa10.07□□□□□ -0.8
VRK3-209ENST00000594948 BOD1L1Q8NFC6 3051 aa10.07□□□□□ -0.8
VRK3-209ENST00000594948 MAP1BP46821 2468 aaKnown RBP10.06□□□□□ -0.8
VRK3-209ENST00000594948 TPRP12270 2363 aaKnown RBP10.06□□□□□ -0.8
VRK3-209ENST00000594948 CFAP47Q6ZTR5 3102 aa10.06□□□□□ -0.8
VRK3-209ENST00000594948 AKAP13Q12802 2813 aa10.06□□□□□ -0.8
VRK3-209ENST00000594948 SMG1Q96Q15 3661 aaKnown RBP10.06□□□□□ -0.8
VRK3-209ENST00000594948 IGHV3OR16-13A0A075B7E8 117 aa10.06□□□□□ -0.8
VRK3-209ENST00000594948 IGHV3-74A0A0B4J1X5 117 aa10.06□□□□□ -0.8
VRK3-209ENST00000594948 C20orf173Q96LM9 149 aa10.06□□□□□ -0.8
VRK3-209ENST00000594948 IGHV1-69DA0A0B4J2H0 117 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 SOCS3O14543 225 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 NPFFO15130 113 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 CDSNQ15517 529 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 BAALCQ8WXS3 180 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 SIGMAR1Q99720 223 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 SPOCK3Q9BQ16 436 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 SPATA25Q9BR10 227 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 PRO0461Q9UI25 63 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 RAXQ9Y2V3 346 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 ZNF292O60281 2723 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 MGAQ8IWI9 3026 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 IGHV3-49A0A0A0MS15 119 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 TRAV41A0A0B4J266 112 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 TMEM238LA0A1B0GVL6 79 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 A6NJY4 79 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 LINC01548A6NM66 108 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 RNF223E7ERA6 249 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 NDUFA4O00483 81 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 NXPH4O95158 308 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 LGALS1P09382 135 aaKnown RBP10.05□□□□□ -0.8
VRK3-209ENST00000594948 WFDC2Q14508 124 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 GAGE13Q4V321 117 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 PAPPA-AS1Q5QFB9 102 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 C2orf66Q6UXQ4 117 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 MOB4Q9Y3A3 225 aa10.05□□□□□ -0.8
VRK3-209ENST00000594948 BSNQ9UPA5 3926 aa10.04□□□□□ -0.8
VRK3-209ENST00000594948 HOXA3O43365 443 aaPredicted RBP10.04□□□□□ -0.8
VRK3-209ENST00000594948 Q6ZQT7 251 aa10.04□□□□□ -0.8
VRK3-209ENST00000594948 GPHB5Q86YW7 130 aa10.04□□□□□ -0.8
VRK3-209ENST00000594948 PHLDA3Q9Y5J5 127 aa10.04□□□□□ -0.8
VRK3-209ENST00000594948 TTC28Q96AY4 2481 aa10.04□□□□□ -0.8
VRK3-209ENST00000594948 GAGE12HA6NDE8 117 aa10.03□□□□□ -0.8
VRK3-209ENST00000594948 H3BUA1 57 aa10.03□□□□□ -0.8
VRK3-209ENST00000594948 S100A4P26447 101 aaKnown RBP10.03□□□□□ -0.8
VRK3-209ENST00000594948 ARL3P36405 182 aa10.03□□□□□ -0.8
VRK3-209ENST00000594948 H3BMG7 143 aa10.03□□□□□ -0.8
VRK3-209ENST00000594948 COX6B1P14854 86 aa10.03□□□□□ -0.8
VRK3-209ENST00000594948 LMO4P61968 165 aa10.03□□□□□ -0.8
VRK3-209ENST00000594948 KLRB1Q12918 225 aa10.03□□□□□ -0.8
VRK3-209ENST00000594948 MORN3Q6PF18 240 aaPredicted RBP10.03□□□□□ -0.8
VRK3-209ENST00000594948 ATP6V0E2Q8NHE4 81 aa10.03□□□□□ -0.8
VRK3-209ENST00000594948 PRADC1Q9BSG0 188 aa10.03□□□□□ -0.8
VRK3-209ENST00000594948 IGHV4OR15-8A0A075B7B6 117 aa10.02□□□□□ -0.81
VRK3-209ENST00000594948 A0A087WW49 117 aa10.02□□□□□ -0.81
VRK3-209ENST00000594948 PRSS29PA6NIE9 313 aa10.02□□□□□ -0.81
VRK3-209ENST00000594948 UBE2D1P51668 147 aa10.02□□□□□ -0.81
VRK3-209ENST00000594948 FOXC1Q12948 553 aa10.02□□□□□ -0.81
VRK3-209ENST00000594948 ANXA2RQ3ZCQ2 193 aa10.02□□□□□ -0.81
VRK3-209ENST00000594948 TSSC4Q9Y5U2 329 aaPredicted RBP10.02□□□□□ -0.81
VRK3-209ENST00000594948 CIDEAO60543 219 aa10.01□□□□□ -0.81
VRK3-209ENST00000594948 IGF1P05019 195 aa10.01□□□□□ -0.81
VRK3-209ENST00000594948 AZU1P20160 251 aa10.01□□□□□ -0.81
VRK3-209ENST00000594948 C14orf178Q8N769 122 aaPredicted RBP10.01□□□□□ -0.81
VRK3-209ENST00000594948 RPL39LQ96EH5 51 aaKnown RBP10.01□□□□□ -0.81
VRK3-209ENST00000594948 SPAG8Q99932 426 aaPredicted RBP10.01□□□□□ -0.81
VRK3-209ENST00000594948 ABCA4P78363 2273 aa10.01□□□□□ -0.81
VRK3-209ENST00000594948 USMG5Q96IX5 58 aa10□□□□□ -0.81
VRK3-209ENST00000594948 KLK15Q9H2R5 256 aa10□□□□□ -0.81
VRK3-209ENST00000594948 CYSLTR1Q9Y271 337 aa10□□□□□ -0.81
VRK3-209ENST00000594948 KALRNO60229 2985 aa10□□□□□ -0.81
VRK3-209ENST00000594948 ZNF815PA8K554 130 aa10□□□□□ -0.81
VRK3-209ENST00000594948 MGPP08493 103 aa10□□□□□ -0.81
VRK3-209ENST00000594948 RNASE3P12724 160 aaKnown RBP10□□□□□ -0.81
VRK3-209ENST00000594948 UCNP55089 124 aa10□□□□□ -0.81
VRK3-209ENST00000594948 HERVK_113P61574 105 aa10□□□□□ -0.81
VRK3-209ENST00000594948 SCGB2A2Q13296 93 aa10□□□□□ -0.81
VRK3-209ENST00000594948 ETDBQ3ZM63 59 aa10□□□□□ -0.81
VRK3-209ENST00000594948 LYRM7Q5U5X0 104 aa10□□□□□ -0.81
VRK3-209ENST00000594948 TMEM141Q96I45 108 aa10□□□□□ -0.81
VRK3-209ENST00000594948 KIF25-AS1Q9Y6Z4 181 aa10□□□□□ -0.81
VRK3-209ENST00000594948 DMXL2Q8TDJ6 3036 aa10□□□□□ -0.81
VRK3-209ENST00000594948 DLX4Q92988 240 aaPredicted RBP9.99□□□□□ -0.81
VRK3-209ENST00000594948 ASPMQ8IZT6 3477 aa9.99□□□□□ -0.81
VRK3-209ENST00000594948 WNK2Q9Y3S1 2297 aa9.99□□□□□ -0.81
VRK3-209ENST00000594948 UNQ9165/PRO28630Q6UXU0 137 aa9.98□□□□□ -0.81
VRK3-209ENST00000594948 TIMM17AQ99595 171 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms