RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 WFDC9Q8NEX5 89 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 NOTCH3Q9UM47 2321 aa11.24□□□□□ -0.61
VRK3-207ENST00000594092 COL6A5A8TX70 2615 aa11.24□□□□□ -0.61
VRK3-207ENST00000594092 H3BMM0 161 aa11.24□□□□□ -0.61
VRK3-207ENST00000594092 KIR3DS1Q14943 382 aa11.24□□□□□ -0.61
VRK3-207ENST00000594092 TPPP3Q9BW30 176 aa11.24□□□□□ -0.61
VRK3-207ENST00000594092 TRAV21A0A0B4J279 112 aa11.23□□□□□ -0.61
VRK3-207ENST00000594092 A0A1B0GUT8 65 aa11.23□□□□□ -0.61
VRK3-207ENST00000594092 A8MTW9 85 aa11.23□□□□□ -0.61
VRK3-207ENST00000594092 KLLNB2CW77 178 aa11.23□□□□□ -0.61
VRK3-207ENST00000594092 OR11H12B2RN74 326 aa11.23□□□□□ -0.61
VRK3-207ENST00000594092 CAMPP49913 170 aa11.23□□□□□ -0.61
VRK3-207ENST00000594092 AMTNQ6UX39 209 aa11.23□□□□□ -0.61
VRK3-207ENST00000594092 Q6ZQT7 251 aa11.23□□□□□ -0.61
VRK3-207ENST00000594092 CD7P09564 240 aa11.23□□□□□ -0.61
VRK3-207ENST00000594092 LEPP41159 167 aa11.23□□□□□ -0.61
VRK3-207ENST00000594092 RIGQ13278 110 aa11.23□□□□□ -0.61
VRK3-207ENST00000594092 C11orf21Q9P2W6 132 aa11.23□□□□□ -0.61
VRK3-207ENST00000594092 A0A1B0GW15 77 aa11.22□□□□□ -0.61
VRK3-207ENST00000594092 APCSP02743 223 aa11.22□□□□□ -0.61
VRK3-207ENST00000594092 RNASE4P34096 147 aaKnown RBP11.22□□□□□ -0.61
VRK3-207ENST00000594092 CMC4P56277 68 aaPredicted RBP11.22□□□□□ -0.61
VRK3-207ENST00000594092 FER1L6-AS1Q8NA97 138 aa11.22□□□□□ -0.61
VRK3-207ENST00000594092 MCRIP2Q9BUT9 160 aaKnown RBP11.22□□□□□ -0.61
VRK3-207ENST00000594092 IGKV3D-20A0A0C4DH25 116 aa11.21□□□□□ -0.61
VRK3-207ENST00000594092 RBMY1BA6NDE4 496 aaKnown RBP11.21□□□□□ -0.61
VRK3-207ENST00000594092 RBMY1EA6NEQ0 496 aaKnown RBP11.21□□□□□ -0.61
VRK3-207ENST00000594092 M0R2Z0 102 aa11.21□□□□□ -0.61
VRK3-207ENST00000594092 UBE2CO00762 179 aa11.21□□□□□ -0.61
VRK3-207ENST00000594092 S100A8P05109 93 aa11.21□□□□□ -0.61
VRK3-207ENST00000594092 RBMY1DP0C7P1 496 aaKnown RBP11.21□□□□□ -0.61
VRK3-207ENST00000594092 ARMS2P0C7Q2 107 aa11.21□□□□□ -0.61
VRK3-207ENST00000594092 LYZL1Q6UWQ5 148 aa11.21□□□□□ -0.61
VRK3-207ENST00000594092 ZNF575Q86XF7 245 aa11.21□□□□□ -0.61
VRK3-207ENST00000594092 FAM110AQ9BQ89 295 aa11.21□□□□□ -0.61
VRK3-207ENST00000594092 C19orf73Q9NVV2 129 aa11.21□□□□□ -0.61
VRK3-207ENST00000594092 GRIFINA4D1Z8 144 aa11.21□□□□□ -0.62
VRK3-207ENST00000594092 IGLC6P0CF74 106 aa11.21□□□□□ -0.62
VRK3-207ENST00000594092 CTRLP40313 264 aa11.21□□□□□ -0.62
VRK3-207ENST00000594092 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.62
VRK3-207ENST00000594092 IGLL1P15814 213 aa11.2□□□□□ -0.62
VRK3-207ENST00000594092 TSPOP30536 169 aa11.2□□□□□ -0.62
VRK3-207ENST00000594092 CDKN1BP46527 198 aa11.2□□□□□ -0.62
VRK3-207ENST00000594092 SLAQ13239 276 aa11.19□□□□□ -0.62
VRK3-207ENST00000594092 SSBP4Q9BWG4 385 aaPredicted RBP11.19□□□□□ -0.62
VRK3-207ENST00000594092 NAGKQ9UJ70 344 aa11.19□□□□□ -0.62
VRK3-207ENST00000594092 TRAV12-2A0A075B6T6 113 aa11.19□□□□□ -0.62
VRK3-207ENST00000594092 C7orf71A4D174 169 aa11.19□□□□□ -0.62
VRK3-207ENST00000594092 F2Z2F3 143 aa11.19□□□□□ -0.62
VRK3-207ENST00000594092 HOXA5P20719 270 aa11.19□□□□□ -0.62
VRK3-207ENST00000594092 FXYD7P58549 80 aa11.19□□□□□ -0.62
VRK3-207ENST00000594092 GFI1BQ5VTD9 330 aa11.19□□□□□ -0.62
VRK3-207ENST00000594092 STHQ8IWL8 128 aa11.19□□□□□ -0.62
VRK3-207ENST00000594092 CLUHP3Q96NS8 147 aa11.19□□□□□ -0.62
VRK3-207ENST00000594092 WFDC10AQ9H1F0 79 aa11.19□□□□□ -0.62
VRK3-207ENST00000594092 WIPF1O43516 503 aa11.18□□□□□ -0.62
VRK3-207ENST00000594092 KIAA1644Q3SXP7 199 aa11.18□□□□□ -0.62
VRK3-207ENST00000594092 TRAV12-3A0A0B4J271 114 aa11.17□□□□□ -0.62
VRK3-207ENST00000594092 ZNF324O75467 553 aaPredicted RBP11.17□□□□□ -0.62
VRK3-207ENST00000594092 COA6Q5JTJ3 125 aaKnown RBP11.17□□□□□ -0.62
VRK3-207ENST00000594092 TRPT1Q86TN4 253 aaKnown RBP11.17□□□□□ -0.62
VRK3-207ENST00000594092 GATD1Q8NB37 220 aa11.17□□□□□ -0.62
VRK3-207ENST00000594092 SRIP30626 198 aa11.16□□□□□ -0.62
VRK3-207ENST00000594092 CRXO43186 299 aaPredicted RBP11.16□□□□□ -0.62
VRK3-207ENST00000594092 SSTP61278 116 aa11.16□□□□□ -0.62
VRK3-207ENST00000594092 TWIST1Q15672 202 aa11.16□□□□□ -0.62
VRK3-207ENST00000594092 ANXA2RQ3ZCQ2 193 aa11.16□□□□□ -0.62
VRK3-207ENST00000594092 MUC21Q5SSG8 566 aa11.16□□□□□ -0.62
VRK3-207ENST00000594092 CNFNQ9BYD5 112 aa11.16□□□□□ -0.62
VRK3-207ENST00000594092 ANK2Q01484 3957 aa11.15□□□□□ -0.62
VRK3-207ENST00000594092 CMYA5Q8N3K9 4069 aa11.15□□□□□ -0.62
VRK3-207ENST00000594092 MUC21A0A0G2JKD1 596 aa11.15□□□□□ -0.62
VRK3-207ENST00000594092 MUC21A0A140T8X8 626 aa11.15□□□□□ -0.62
VRK3-207ENST00000594092 OR5AL1P0C617 328 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 NTF3P20783 257 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 S100A4P26447 101 aaKnown RBP11.14□□□□□ -0.63
VRK3-207ENST00000594092 S100A2P29034 98 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 ASIPP42127 132 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 AKR1D1P51857 326 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 OR10J3Q5JRS4 329 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 FAM159AQ6UWV7 190 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 ZNF493Q6ZR52 646 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 GTSCR1Q86UQ5 136 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 HIST3H2BBQ8N257 126 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 KCNS1Q96KK3 526 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 H3BVH4 76 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 SNAI2O43623 268 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 RBMY1A1P0DJD3 496 aaKnown RBP11.14□□□□□ -0.63
VRK3-207ENST00000594092 RBMY1CP0DJD4 496 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 Q0VG73 95 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 RBMY1FQ15415 496 aaKnown RBP11.14□□□□□ -0.63
VRK3-207ENST00000594092 PDZD11Q5EBL8 140 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 DEFB125Q8N687 156 aa11.14□□□□□ -0.63
VRK3-207ENST00000594092 LOC102724200A0A096LPH7 203 aaPredicted RBP11.13□□□□□ -0.63
VRK3-207ENST00000594092 CACNG7P62955 275 aa11.13□□□□□ -0.63
VRK3-207ENST00000594092 PRR31Q5SQ13 230 aa11.13□□□□□ -0.63
VRK3-207ENST00000594092 BAGE3Q86Y29 109 aa11.13□□□□□ -0.63
VRK3-207ENST00000594092 LINC00518Q8N0U6 118 aa11.13□□□□□ -0.63
VRK3-207ENST00000594092 MDFIQ99750 246 aa11.13□□□□□ -0.63
VRK3-207ENST00000594092 MED14OSP0DP75 135 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms