RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 STHQ8IWL8 128 aa15.31■□□□□ 0.04
PNKP-203ENST00000593946 TRAV12-3A0A0B4J271 114 aa15.31■□□□□ 0.04
PNKP-203ENST00000593946 IGLL1P15814 213 aa15.31■□□□□ 0.04
PNKP-203ENST00000593946 WFDC10AQ9H1F0 79 aa15.31■□□□□ 0.04
PNKP-203ENST00000593946 A0A1B0GXF2 115 aa15.3■□□□□ 0.04
PNKP-203ENST00000593946 GRIFINA4D1Z8 144 aa15.3■□□□□ 0.04
PNKP-203ENST00000593946 CRXO43186 299 aaPredicted RBP15.3■□□□□ 0.04
PNKP-203ENST00000593946 RASL11AQ6T310 242 aa15.3■□□□□ 0.04
PNKP-203ENST00000593946 NAGKQ9UJ70 344 aa15.3■□□□□ 0.04
PNKP-203ENST00000593946 CTRLP40313 264 aa15.29■□□□□ 0.04
PNKP-203ENST00000593946 FXYD7P58549 80 aa15.29■□□□□ 0.04
PNKP-203ENST00000593946 ANXA2RQ3ZCQ2 193 aa15.29■□□□□ 0.04
PNKP-203ENST00000593946 FER1L6-AS1Q8NA97 138 aa15.29■□□□□ 0.04
PNKP-203ENST00000593946 TRGC2P03986 189 aa15.29■□□□□ 0.04
PNKP-203ENST00000593946 MUC21Q5SSG8 566 aa15.29■□□□□ 0.04
PNKP-203ENST00000593946 LYZL1Q6UWQ5 148 aa15.29■□□□□ 0.04
PNKP-203ENST00000593946 PKD1L1Q8TDX9 2849 aa15.29■□□□□ 0.04
PNKP-203ENST00000593946 A0A1B0GUT8 65 aa15.28■□□□□ 0.04
PNKP-203ENST00000593946 C1orf196B1AJZ1 125 aa15.28■□□□□ 0.04
PNKP-203ENST00000593946 ARMS2P0C7Q2 107 aa15.28■□□□□ 0.04
PNKP-203ENST00000593946 COX19Q49B96 90 aa15.28■□□□□ 0.04
PNKP-203ENST00000593946 TPPP3Q9BW30 176 aa15.28■□□□□ 0.04
PNKP-203ENST00000593946 GNB1LQ9BYB4 327 aa15.28■□□□□ 0.04
PNKP-203ENST00000593946 PHOX2AO14813 284 aa15.27■□□□□ 0.04
PNKP-203ENST00000593946 TDRG1Q3Y452 100 aa15.27■□□□□ 0.04
PNKP-203ENST00000593946 GTSCR1Q86UQ5 136 aa15.27■□□□□ 0.04
PNKP-203ENST00000593946 HBBP68871 147 aa15.26■□□□□ 0.03
PNKP-203ENST00000593946 WDR73Q6P4I2 378 aa15.26■□□□□ 0.03
PNKP-203ENST00000593946 FAM159AQ6UWV7 190 aa15.26■□□□□ 0.03
PNKP-203ENST00000593946 TMEM136Q6ZRR5 245 aa15.26■□□□□ 0.03
PNKP-203ENST00000593946 RBMY1A1P0DJD3 496 aaKnown RBP15.26■□□□□ 0.03
PNKP-203ENST00000593946 RBMY1CP0DJD4 496 aa15.26■□□□□ 0.03
PNKP-203ENST00000593946 RBMY1FQ15415 496 aaKnown RBP15.26■□□□□ 0.03
PNKP-203ENST00000593946 KCNS1Q96KK3 526 aa15.26■□□□□ 0.03
PNKP-203ENST00000593946 CNFNQ9BYD5 112 aa15.26■□□□□ 0.03
PNKP-203ENST00000593946 TRAPPC1Q9Y5R8 145 aa15.26■□□□□ 0.03
PNKP-203ENST00000593946 SNURFLB1AK76 121 aa15.25■□□□□ 0.03
PNKP-203ENST00000593946 F2Z2F3 143 aa15.25■□□□□ 0.03
PNKP-203ENST00000593946 AMBPP02760 352 aa15.25■□□□□ 0.03
PNKP-203ENST00000593946 DNLZQ5SXM8 178 aa15.25■□□□□ 0.03
PNKP-203ENST00000593946 SSBP4Q9BWG4 385 aaPredicted RBP15.25■□□□□ 0.03
PNKP-203ENST00000593946 MT-ND6P03923 174 aa15.24■□□□□ 0.03
PNKP-203ENST00000593946 OR5AL1P0C617 328 aa15.24■□□□□ 0.03
PNKP-203ENST00000593946 RIGQ13278 110 aa15.24■□□□□ 0.03
PNKP-203ENST00000593946 BORCS7Q96B45 105 aa15.24■□□□□ 0.03
PNKP-203ENST00000593946 SNAI2O43623 268 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 HLA-DQA1P01909 254 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 ASIPP42127 132 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 CAMPP49913 170 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 RAB5BP61020 215 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 NUTF2P61970 127 aaKnown RBP15.23■□□□□ 0.03
PNKP-203ENST00000593946 FABP9Q0Z7S8 132 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 DEFB125Q8N687 156 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 IGHV1OR15-1A0A075B7D0 117 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 A0A1B0GW15 77 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 GNRH2O43555 120 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 RAB4BP61018 213 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 ZFP82Q8N141 532 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 C20orf144Q9BQM9 153 aa15.23■□□□□ 0.03
PNKP-203ENST00000593946 H3BVH4 76 aa15.22■□□□□ 0.03
PNKP-203ENST00000593946 INSP01308 110 aa15.22■□□□□ 0.03
PNKP-203ENST00000593946 MED14OSP0DP75 135 aa15.22■□□□□ 0.03
PNKP-203ENST00000593946 PRR31Q5SQ13 230 aa15.22■□□□□ 0.03
PNKP-203ENST00000593946 FRZBQ92765 325 aa15.22■□□□□ 0.03
PNKP-203ENST00000593946 MRPL18Q9H0U6 180 aaKnown RBP15.22■□□□□ 0.03
PNKP-203ENST00000593946 MUC4Q99102 2169 aa15.22■□□□□ 0.03
PNKP-203ENST00000593946 MUC21A0A0G2JKD1 596 aa15.21■□□□□ 0.03
PNKP-203ENST00000593946 MUC21A0A140T8X8 626 aa15.21■□□□□ 0.03
PNKP-203ENST00000593946 XCL2Q9UBD3 114 aa15.21■□□□□ 0.03
PNKP-203ENST00000593946 RNASE3P12724 160 aaKnown RBP15.2■□□□□ 0.02
PNKP-203ENST00000593946 S100A4P26447 101 aaKnown RBP15.2■□□□□ 0.02
PNKP-203ENST00000593946 GATD1Q8NB37 220 aa15.2■□□□□ 0.02
PNKP-203ENST00000593946 SCRT2Q9NQ03 307 aa15.2■□□□□ 0.02
PNKP-203ENST00000593946 ANK2Q01484 3957 aa15.2■□□□□ 0.02
PNKP-203ENST00000593946 S100A8P05109 93 aa15.2■□□□□ 0.02
PNKP-203ENST00000593946 GIG44P09565 113 aaPredicted RBP15.2■□□□□ 0.02
PNKP-203ENST00000593946 NTF3P20783 257 aa15.2■□□□□ 0.02
PNKP-203ENST00000593946 Q8N1Y9 231 aa15.2■□□□□ 0.02
PNKP-203ENST00000593946 OR10AG1Q8NH19 301 aa15.2■□□□□ 0.02
PNKP-203ENST00000593946 TP53TG3Q9ULZ0 132 aa15.2■□□□□ 0.02
PNKP-203ENST00000593946 HIST1H2BKO60814 126 aa15.19■□□□□ 0.02
PNKP-203ENST00000593946 HIST1H2BJP06899 126 aa15.19■□□□□ 0.02
PNKP-203ENST00000593946 RPL35AP18077 110 aaKnown RBP15.19■□□□□ 0.02
PNKP-203ENST00000593946 HIST1H2BOP23527 126 aa15.19■□□□□ 0.02
PNKP-203ENST00000593946 HIST1H2BBP33778 126 aa15.19■□□□□ 0.02
PNKP-203ENST00000593946 HIST1H2BDP58876 126 aa15.19■□□□□ 0.02
PNKP-203ENST00000593946 HIST1H2BCP62807 126 aa15.19■□□□□ 0.02
PNKP-203ENST00000593946 HIST2H2BEQ16778 126 aa15.19■□□□□ 0.02
PNKP-203ENST00000593946 OXLD1Q5BKU9 147 aa15.19■□□□□ 0.02
PNKP-203ENST00000593946 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.19■□□□□ 0.02
PNKP-203ENST00000593946 HIST1H2BHQ93079 126 aa15.19■□□□□ 0.02
PNKP-203ENST00000593946 MDFIQ99750 246 aa15.19■□□□□ 0.02
PNKP-203ENST00000593946 HIST1H2BNQ99877 126 aa15.19■□□□□ 0.02
PNKP-203ENST00000593946 HIST1H2BMQ99879 126 aa15.19■□□□□ 0.02
PNKP-203ENST00000593946 IGHV4-4A0A075B6R2 117 aa15.18■□□□□ 0.02
PNKP-203ENST00000593946 TRGC1P0CF51 173 aa15.18■□□□□ 0.02
PNKP-203ENST00000593946 SSTP61278 116 aa15.18■□□□□ 0.02
PNKP-203ENST00000593946 SLAQ13239 276 aa15.18■□□□□ 0.02
PNKP-203ENST00000593946 MORN3Q6PF18 240 aaPredicted RBP15.18■□□□□ 0.02
PNKP-203ENST00000593946 IGHV3-16A0A0C4DH30 117 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms