RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 BIN3Q9NQY0 253 aa11.4□□□□□ -0.58
CIRBP-241ENST00000593048 TRBV19A0A075B6N1 114 aa11.39□□□□□ -0.59
CIRBP-241ENST00000593048 GGTLC3B5MD39 225 aa11.39□□□□□ -0.59
CIRBP-241ENST00000593048 ATP5G1P05496 136 aa11.39□□□□□ -0.59
CIRBP-241ENST00000593048 IGLC2P0DOY2 106 aa11.39□□□□□ -0.59
CIRBP-241ENST00000593048 PYYP10082 97 aa11.39□□□□□ -0.59
CIRBP-241ENST00000593048 RPL23P62829 140 aaKnown RBP11.39□□□□□ -0.59
CIRBP-241ENST00000593048 ZNF674Q2M3X9 581 aa11.39□□□□□ -0.59
CIRBP-241ENST00000593048 IMMP2LQ96T52 175 aa11.39□□□□□ -0.59
CIRBP-241ENST00000593048 EPDR1Q9UM22 224 aa11.39□□□□□ -0.59
CIRBP-241ENST00000593048 KLF12Q9Y4X4 402 aa11.39□□□□□ -0.59
CIRBP-241ENST00000593048 TIMM8BQ9Y5J9 83 aaPredicted RBP11.39□□□□□ -0.59
CIRBP-241ENST00000593048 PKHD1P08F94 4074 aa11.39□□□□□ -0.59
CIRBP-241ENST00000593048 DNAH2Q9P225 4427 aa11.38□□□□□ -0.59
CIRBP-241ENST00000593048 TRBV6-1A0A0K0K1D8 114 aa11.38□□□□□ -0.59
CIRBP-241ENST00000593048 SCO2A0A1W2PP80 73 aa11.38□□□□□ -0.59
CIRBP-241ENST00000593048 PLAC8L1A1L4L8 177 aa11.38□□□□□ -0.59
CIRBP-241ENST00000593048 CBY3A6NI87 242 aa11.38□□□□□ -0.59
CIRBP-241ENST00000593048 H7BYZ3 331 aa11.38□□□□□ -0.59
CIRBP-241ENST00000593048 SLC17A3O00476 420 aa11.38□□□□□ -0.59
CIRBP-241ENST00000593048 NUDT3O95989 172 aa11.38□□□□□ -0.59
CIRBP-241ENST00000593048 ZNF493Q6ZR52 646 aa11.38□□□□□ -0.59
CIRBP-241ENST00000593048 LINC01551Q86U37 167 aa11.38□□□□□ -0.59
CIRBP-241ENST00000593048 DNAH17Q9UFH2 4485 aa11.38□□□□□ -0.59
CIRBP-241ENST00000593048 A0A1B0GVY2 172 aa11.37□□□□□ -0.59
CIRBP-241ENST00000593048 K7EQM0 130 aa11.37□□□□□ -0.59
CIRBP-241ENST00000593048 PEX7O00628 323 aa11.37□□□□□ -0.59
CIRBP-241ENST00000593048 RPL35P42766 123 aaKnown RBP11.37□□□□□ -0.59
CIRBP-241ENST00000593048 FAM3BP58499 235 aaPredicted RBP11.37□□□□□ -0.59
CIRBP-241ENST00000593048 ADIRFQ15847 76 aa11.37□□□□□ -0.59
CIRBP-241ENST00000593048 CMTM2Q8TAZ6 248 aa11.37□□□□□ -0.59
CIRBP-241ENST00000593048 C20orf144Q9BQM9 153 aa11.37□□□□□ -0.59
CIRBP-241ENST00000593048 AAMDCQ9H7C9 122 aa11.37□□□□□ -0.59
CIRBP-241ENST00000593048 NOP10Q9NPE3 64 aaKnown RBP11.37□□□□□ -0.59
CIRBP-241ENST00000593048 PGPA6NDG6 321 aa11.36□□□□□ -0.59
CIRBP-241ENST00000593048 PRAC2D3DTV9 90 aa11.36□□□□□ -0.59
CIRBP-241ENST00000593048 J3KRW8 73 aa11.36□□□□□ -0.59
CIRBP-241ENST00000593048 AKR1C3P42330 323 aa11.36□□□□□ -0.59
CIRBP-241ENST00000593048 GNG4P50150 75 aa11.36□□□□□ -0.59
CIRBP-241ENST00000593048 RANP62826 216 aaKnown RBP11.36□□□□□ -0.59
CIRBP-241ENST00000593048 TMEM183BQ1AE95 376 aa11.36□□□□□ -0.59
CIRBP-241ENST00000593048 Q6ZR54 194 aa11.36□□□□□ -0.59
CIRBP-241ENST00000593048 TMEM263Q8WUH6 116 aaKnown RBP11.36□□□□□ -0.59
CIRBP-241ENST00000593048 FMC1Q96HJ9 113 aa11.36□□□□□ -0.59
CIRBP-241ENST00000593048 Q9H3A6 140 aa11.36□□□□□ -0.59
CIRBP-241ENST00000593048 ZNF586Q9NXT0 402 aa11.36□□□□□ -0.59
CIRBP-241ENST00000593048 KIR3DS1Q14943 382 aa11.35□□□□□ -0.59
CIRBP-241ENST00000593048 C1orf134Q5TEV5 83 aa11.35□□□□□ -0.59
CIRBP-241ENST00000593048 ISOC2Q96AB3 205 aa11.35□□□□□ -0.59
CIRBP-241ENST00000593048 TRAV9-1A0A075B6T8 112 aa11.34□□□□□ -0.59
CIRBP-241ENST00000593048 SLC25A5P05141 298 aaKnown RBP11.34□□□□□ -0.59
CIRBP-241ENST00000593048 S100PP25815 95 aa11.34□□□□□ -0.59
CIRBP-241ENST00000593048 LEPP41159 167 aa11.34□□□□□ -0.59
CIRBP-241ENST00000593048 CSN1S1P47710 185 aa11.34□□□□□ -0.59
CIRBP-241ENST00000593048 CCL18P55774 89 aa11.34□□□□□ -0.59
CIRBP-241ENST00000593048 GFI1BQ5VTD9 330 aa11.34□□□□□ -0.59
CIRBP-241ENST00000593048 CBLN2Q8IUK8 224 aa11.34□□□□□ -0.59
CIRBP-241ENST00000593048 RNASE8Q8TDE3 154 aaKnown RBP11.34□□□□□ -0.59
CIRBP-241ENST00000593048 BLNKQ8WV28 456 aa11.34□□□□□ -0.59
CIRBP-241ENST00000593048 MRPL53Q96EL3 112 aaKnown RBP11.34□□□□□ -0.59
CIRBP-241ENST00000593048 DYNC1H1Q14204 4646 aaKnown RBP11.34□□□□□ -0.59
CIRBP-241ENST00000593048 COLCA2A8K830 154 aa11.33□□□□□ -0.6
CIRBP-241ENST00000593048 SNURFLB1AK76 121 aa11.33□□□□□ -0.6
CIRBP-241ENST00000593048 TCRAP04437 139 aa11.33□□□□□ -0.6
CIRBP-241ENST00000593048 UBE2G1P62253 170 aa11.33□□□□□ -0.6
CIRBP-241ENST00000593048 RPL19P84098 196 aaKnown RBP11.33□□□□□ -0.6
CIRBP-241ENST00000593048 OR5I1Q13606 314 aa11.33□□□□□ -0.6
CIRBP-241ENST00000593048 KCNIP4Q6PIL6 250 aa11.33□□□□□ -0.6
CIRBP-241ENST00000593048 SFRP2Q96HF1 295 aa11.33□□□□□ -0.6
CIRBP-241ENST00000593048 OSTCQ9NRP0 149 aa11.33□□□□□ -0.6
CIRBP-241ENST00000593048 MUC4Q99102 2169 aa11.33□□□□□ -0.6
CIRBP-241ENST00000593048 TRBV20OR9-2A0A075B6H5 130 aa11.32□□□□□ -0.6
CIRBP-241ENST00000593048 TRBV24-1A0A075B6N3 115 aa11.32□□□□□ -0.6
CIRBP-241ENST00000593048 TRAV12-3A0A0B4J271 114 aa11.32□□□□□ -0.6
CIRBP-241ENST00000593048 GCGP01275 180 aa11.32□□□□□ -0.6
CIRBP-241ENST00000593048 CT45A10P0DMU9 189 aa11.32□□□□□ -0.6
CIRBP-241ENST00000593048 CENPWQ5EE01 88 aa11.32□□□□□ -0.6
CIRBP-241ENST00000593048 FAM231DQ6ZW35 169 aa11.32□□□□□ -0.6
CIRBP-241ENST00000593048 TMEM75Q8N9X5 138 aa11.32□□□□□ -0.6
CIRBP-241ENST00000593048 OCC1Q8TAD7 63 aa11.32□□□□□ -0.6
CIRBP-241ENST00000593048 DERL1Q9BUN8 251 aa11.32□□□□□ -0.6
CIRBP-241ENST00000593048 ZFP30Q9Y2G7 519 aa11.32□□□□□ -0.6
CIRBP-241ENST00000593048 DNAH11Q96DT5 4516 aa11.31□□□□□ -0.6
CIRBP-241ENST00000593048 NPIPB6E9PJ23 425 aa11.31□□□□□ -0.6
CIRBP-241ENST00000593048 MED14OSP0DP75 135 aa11.31□□□□□ -0.6
CIRBP-241ENST00000593048 YPEL4Q96NS1 127 aa11.31□□□□□ -0.6
CIRBP-241ENST00000593048 ODF3Q96PU9 254 aa11.31□□□□□ -0.6
CIRBP-241ENST00000593048 GAGE12BA1L429 117 aa11.3□□□□□ -0.6
CIRBP-241ENST00000593048 RBAKDNA6NC62 111 aa11.3□□□□□ -0.6
CIRBP-241ENST00000593048 GAGE7O76087 117 aa11.3□□□□□ -0.6
CIRBP-241ENST00000593048 GAGE12FP0CL80 117 aa11.3□□□□□ -0.6
CIRBP-241ENST00000593048 GAGE12GP0CL81 117 aa11.3□□□□□ -0.6
CIRBP-241ENST00000593048 GAGE12IP0CL82 117 aa11.3□□□□□ -0.6
CIRBP-241ENST00000593048 BAGE2Q86Y30 109 aa11.3□□□□□ -0.6
CIRBP-241ENST00000593048 OR10G8Q8NGN5 311 aa11.3□□□□□ -0.6
CIRBP-241ENST00000593048 NBDYA0A0U1RRE5 68 aa11.29□□□□□ -0.6
CIRBP-241ENST00000593048 M0R3E3 92 aa11.29□□□□□ -0.6
CIRBP-241ENST00000593048 LTAP01374 205 aa11.29□□□□□ -0.6
CIRBP-241ENST00000593048 PFN1P07737 140 aaKnown RBP11.29□□□□□ -0.6
CIRBP-241ENST00000593048 ERCC8Q13216 396 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms