RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 LINC00310P59036 64 aa13.3□□□□□ -0.28
SMARCA4-215ENST00000590574 NPC2P61916 151 aa13.3□□□□□ -0.28
SMARCA4-215ENST00000590574 LOXL1Q08397 574 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-215ENST00000590574 MRPL53Q96EL3 112 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-215ENST00000590574 CRYGBP07316 175 aa13.3□□□□□ -0.28
SMARCA4-215ENST00000590574 STHQ8IWL8 128 aa13.3□□□□□ -0.28
SMARCA4-215ENST00000590574 DSCR9P59020 149 aa13.29□□□□□ -0.28
SMARCA4-215ENST00000590574 GNRH2O43555 120 aa13.29□□□□□ -0.28
SMARCA4-215ENST00000590574 ZFP36P26651 326 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-215ENST00000590574 PLEKHB2Q96CS7 222 aa13.29□□□□□ -0.28
SMARCA4-215ENST00000590574 C5orf42Q9H799 3197 aa13.29□□□□□ -0.28
SMARCA4-215ENST00000590574 SPINK13Q1W4C9 94 aa13.29□□□□□ -0.28
SMARCA4-215ENST00000590574 CACNA1BQ00975 2339 aa13.29□□□□□ -0.28
SMARCA4-215ENST00000590574 TRAV12-2A0A075B6T6 113 aa13.29□□□□□ -0.28
SMARCA4-215ENST00000590574 SDHAF1A6NFY7 115 aa13.28□□□□□ -0.28
SMARCA4-215ENST00000590574 PMVKQ15126 192 aa13.28□□□□□ -0.28
SMARCA4-215ENST00000590574 C20orf78Q9BR46 151 aa13.28□□□□□ -0.28
SMARCA4-215ENST00000590574 CDKN1BP46527 198 aa13.28□□□□□ -0.28
SMARCA4-215ENST00000590574 ZNF493Q6ZR52 646 aa13.28□□□□□ -0.28
SMARCA4-215ENST00000590574 TEX29Q8N6K0 151 aa13.28□□□□□ -0.28
SMARCA4-215ENST00000590574 IGHV7-4-1A0A0J9YVY3 117 aa13.27□□□□□ -0.28
SMARCA4-215ENST00000590574 ADORA2A-AS1P86434 159 aa13.27□□□□□ -0.28
SMARCA4-215ENST00000590574 TRPT1Q86TN4 253 aaKnown RBP13.27□□□□□ -0.28
SMARCA4-215ENST00000590574 TMEM141Q96I45 108 aa13.27□□□□□ -0.28
SMARCA4-215ENST00000590574 NDUFS8O00217 210 aa13.27□□□□□ -0.29
SMARCA4-215ENST00000590574 C11orf44Q8N8P7 122 aa13.27□□□□□ -0.29
SMARCA4-215ENST00000590574 BRCA2P51587 3418 aa13.27□□□□□ -0.29
SMARCA4-215ENST00000590574 SPXQ9BT56 116 aa13.27□□□□□ -0.29
SMARCA4-215ENST00000590574 ARFGEF3Q5TH69 2177 aa13.27□□□□□ -0.29
SMARCA4-215ENST00000590574 A0A0U1RRA0 63 aa13.26□□□□□ -0.29
SMARCA4-215ENST00000590574 TTTY13Q9BZ97 58 aa13.26□□□□□ -0.29
SMARCA4-215ENST00000590574 TRBV25-1A0A075B6N4 114 aa13.26□□□□□ -0.29
SMARCA4-215ENST00000590574 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-215ENST00000590574 ZNF80P51504 273 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-215ENST00000590574 YAE1D1Q9NRH1 226 aa13.26□□□□□ -0.29
SMARCA4-215ENST00000590574 TOMM7Q9P0U1 55 aa13.26□□□□□ -0.29
SMARCA4-215ENST00000590574 TRGV2A0A075B6R0 118 aa13.26□□□□□ -0.29
SMARCA4-215ENST00000590574 TAL2Q16559 108 aa13.26□□□□□ -0.29
SMARCA4-215ENST00000590574 ZNF48Q96MX3 618 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-215ENST00000590574 RPL39LQ96EH5 51 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-215ENST00000590574 SPTAN1Q13813 2472 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-215ENST00000590574 H3BMG7 143 aa13.25□□□□□ -0.29
SMARCA4-215ENST00000590574 C12orf74Q32Q52 190 aa13.25□□□□□ -0.29
SMARCA4-215ENST00000590574 ETDBQ3ZM63 59 aa13.25□□□□□ -0.29
SMARCA4-215ENST00000590574 F8W1H4 67 aa13.24□□□□□ -0.29
SMARCA4-215ENST00000590574 ZNF415Q09FC8 603 aa13.24□□□□□ -0.29
SMARCA4-215ENST00000590574 ADAMTS20P59510 1910 aa13.24□□□□□ -0.29
SMARCA4-215ENST00000590574 AMTNQ6UX39 209 aa13.24□□□□□ -0.29
SMARCA4-215ENST00000590574 BOD1L2Q8IYS8 172 aa13.24□□□□□ -0.29
SMARCA4-215ENST00000590574 LINC01356Q8N9X3 169 aa13.24□□□□□ -0.29
SMARCA4-215ENST00000590574 PRSS29PA6NIE9 313 aa13.24□□□□□ -0.29
SMARCA4-215ENST00000590574 TIMM21Q9BVV7 248 aa13.24□□□□□ -0.29
SMARCA4-215ENST00000590574 LENEPQ9Y5L5 61 aa13.24□□□□□ -0.29
SMARCA4-215ENST00000590574 KNCNA6PVL3 124 aa13.23□□□□□ -0.29
SMARCA4-215ENST00000590574 TMEM262E9PQX1 116 aa13.23□□□□□ -0.29
SMARCA4-215ENST00000590574 M0R2P5 195 aa13.23□□□□□ -0.29
SMARCA4-215ENST00000590574 CHD7Q9P2D1 2997 aa13.23□□□□□ -0.29
SMARCA4-215ENST00000590574 IGHV1OR15-1A0A075B7D0 117 aa13.23□□□□□ -0.29
SMARCA4-215ENST00000590574 K7EMI3 77 aa13.23□□□□□ -0.29
SMARCA4-215ENST00000590574 DEFB131AP59861 70 aa13.23□□□□□ -0.29
SMARCA4-215ENST00000590574 MAPK1IP1LQ8NDC0 245 aa13.23□□□□□ -0.29
SMARCA4-215ENST00000590574 OR13C6PQ8NH95 151 aa13.23□□□□□ -0.29
SMARCA4-215ENST00000590574 TSSC4Q9Y5U2 329 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-215ENST00000590574 IGLV2-11P01706 119 aa13.22□□□□□ -0.29
SMARCA4-215ENST00000590574 CRIP1P50238 77 aa13.22□□□□□ -0.29
SMARCA4-215ENST00000590574 PHLDA1Q8WV24 401 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-215ENST00000590574 SPATA12Q7Z6I5 190 aa13.22□□□□□ -0.29
SMARCA4-215ENST00000590574 C5orf56Q8N8D9 126 aa13.22□□□□□ -0.29
SMARCA4-215ENST00000590574 ODF3BA8MYP8 253 aa13.22□□□□□ -0.29
SMARCA4-215ENST00000590574 C16orf54Q6UWD8 224 aa13.22□□□□□ -0.29
SMARCA4-215ENST00000590574 LY6G5BQ8NDX9 201 aa13.22□□□□□ -0.29
SMARCA4-215ENST00000590574 I3L3M4 83 aa13.21□□□□□ -0.29
SMARCA4-215ENST00000590574 DNAL4O96015 105 aa13.21□□□□□ -0.29
SMARCA4-215ENST00000590574 FXYD2P54710 66 aa13.21□□□□□ -0.29
SMARCA4-215ENST00000590574 TRAV8-4A0A0B4J246 113 aa13.21□□□□□ -0.3
SMARCA4-215ENST00000590574 SAP30O75446 220 aa13.21□□□□□ -0.3
SMARCA4-215ENST00000590574 LY6LH3BQJ8 138 aa13.2□□□□□ -0.3
SMARCA4-215ENST00000590574 SIRPDQ9H106 197 aa13.2□□□□□ -0.3
SMARCA4-215ENST00000590574 TSPAN13O95857 204 aa13.2□□□□□ -0.3
SMARCA4-215ENST00000590574 C9orf47Q6ZRZ4 202 aa13.2□□□□□ -0.3
SMARCA4-215ENST00000590574 PLXNB1O43157 2135 aa13.2□□□□□ -0.3
SMARCA4-215ENST00000590574 H3BUA1 57 aa13.2□□□□□ -0.3
SMARCA4-215ENST00000590574 ODF1Q14990 250 aa13.2□□□□□ -0.3
SMARCA4-215ENST00000590574 TRGV1A0A0A0MS02 117 aa13.19□□□□□ -0.3
SMARCA4-215ENST00000590574 ATXN8Q156A1 80 aa13.19□□□□□ -0.3
SMARCA4-215ENST00000590574 IGHV4-38-2P0DP08 117 aa13.19□□□□□ -0.3
SMARCA4-215ENST00000590574 Q8N976 141 aa13.19□□□□□ -0.3
SMARCA4-215ENST00000590574 C9JAW5 83 aa13.19□□□□□ -0.3
SMARCA4-215ENST00000590574 IGHV3-53P01767 116 aa13.19□□□□□ -0.3
SMARCA4-215ENST00000590574 DEFB1P60022 68 aa13.19□□□□□ -0.3
SMARCA4-215ENST00000590574 FBXL19-AS1Q494R0 122 aa13.19□□□□□ -0.3
SMARCA4-215ENST00000590574 SRSF2Q01130 221 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-215ENST00000590574 GATA3P23771 443 aa13.18□□□□□ -0.3
SMARCA4-215ENST00000590574 TNRC6BQ9UPQ9 1833 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-215ENST00000590574 IGHV4-61A0A0C4DH41 118 aa13.18□□□□□ -0.3
SMARCA4-215ENST00000590574 VWC2LB2RUY7 222 aa13.18□□□□□ -0.3
SMARCA4-215ENST00000590574 TMEM95Q3KNT9 176 aa13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 UBE2E2Q96LR5 201 aa13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 ANAPC13Q9BS18 74 aa13.17□□□□□ -0.3
SMARCA4-215ENST00000590574 ADARB2-AS1A8MUL3 147 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms