RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 LINC00588Q9Y4M8 146 aa12.66□□□□□ -0.38
DDX39A-212ENST00000590260 TRGV2A0A075B6R0 118 aa12.65□□□□□ -0.38
DDX39A-212ENST00000590260 GCGP01275 180 aa12.65□□□□□ -0.38
DDX39A-212ENST00000590260 IGHV3-53P01767 116 aa12.65□□□□□ -0.38
DDX39A-212ENST00000590260 UBE2DNLQ8IWF7 75 aa12.65□□□□□ -0.38
DDX39A-212ENST00000590260 TRGV11A0A075B6L2 103 aa12.64□□□□□ -0.39
DDX39A-212ENST00000590260 PEX7O00628 323 aa12.64□□□□□ -0.39
DDX39A-212ENST00000590260 FHL2Q14192 279 aa12.64□□□□□ -0.39
DDX39A-212ENST00000590260 ZNRF2Q8NHG8 242 aa12.64□□□□□ -0.39
DDX39A-212ENST00000590260 STOML3Q8TAV4 291 aa12.64□□□□□ -0.39
DDX39A-212ENST00000590260 FAM213BQ8TBF2 198 aa12.64□□□□□ -0.39
DDX39A-212ENST00000590260 ARL2-SNX15V9GYD0 113 aa12.64□□□□□ -0.39
DDX39A-212ENST00000590260 MUC4Q99102 2169 aa12.63□□□□□ -0.39
DDX39A-212ENST00000590260 H3BNG1 76 aa12.63□□□□□ -0.39
DDX39A-212ENST00000590260 K7EQM0 130 aa12.63□□□□□ -0.39
DDX39A-212ENST00000590260 Q86TA4 180 aa12.63□□□□□ -0.39
DDX39A-212ENST00000590260 RASL10AQ92737 203 aa12.63□□□□□ -0.39
DDX39A-212ENST00000590260 A0A096LPF7 62 aa12.62□□□□□ -0.39
DDX39A-212ENST00000590260 A0A1B0GV50 99 aa12.62□□□□□ -0.39
DDX39A-212ENST00000590260 UMAD1C9J7I0 102 aa12.62□□□□□ -0.39
DDX39A-212ENST00000590260 RTL8CO15255 209 aa12.62□□□□□ -0.39
DDX39A-212ENST00000590260 IFNA7P01567 189 aa12.62□□□□□ -0.39
DDX39A-212ENST00000590260 C1QBP02746 253 aa12.62□□□□□ -0.39
DDX39A-212ENST00000590260 PFN1P07737 140 aaKnown RBP12.62□□□□□ -0.39
DDX39A-212ENST00000590260 SFTA3P0C7M3 94 aa12.62□□□□□ -0.39
DDX39A-212ENST00000590260 CRIP1P50238 77 aa12.62□□□□□ -0.39
DDX39A-212ENST00000590260 SFT2D1Q8WV19 159 aa12.62□□□□□ -0.39
DDX39A-212ENST00000590260 ZNF479Q96JC4 524 aa12.62□□□□□ -0.39
DDX39A-212ENST00000590260 SPXQ9BT56 116 aa12.62□□□□□ -0.39
DDX39A-212ENST00000590260 NDFIP1Q9BT67 221 aa12.62□□□□□ -0.39
DDX39A-212ENST00000590260 hCG_2014768A0A024R1R8 64 aa12.61□□□□□ -0.39
DDX39A-212ENST00000590260 PAGE4O60829 102 aa12.61□□□□□ -0.39
DDX39A-212ENST00000590260 PFDN1O60925 122 aa12.61□□□□□ -0.39
DDX39A-212ENST00000590260 TPT1P13693 172 aaKnown RBP12.61□□□□□ -0.39
DDX39A-212ENST00000590260 ESRGQ1W209 222 aa12.61□□□□□ -0.39
DDX39A-212ENST00000590260 SMUG1Q53HV7 270 aa12.61□□□□□ -0.39
DDX39A-212ENST00000590260 ZNF575Q86XF7 245 aa12.61□□□□□ -0.39
DDX39A-212ENST00000590260 NKX6-2Q9C056 277 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-212ENST00000590260 PKD1P98161 4303 aa12.61□□□□□ -0.39
DDX39A-212ENST00000590260 IGKV3D-20A0A0C4DH25 116 aa12.6□□□□□ -0.39
DDX39A-212ENST00000590260 FBLL1A6NHQ2 334 aaKnown RBP12.6□□□□□ -0.39
DDX39A-212ENST00000590260 CCL20P78556 96 aa12.6□□□□□ -0.39
DDX39A-212ENST00000590260 DPPA3Q6W0C5 159 aa12.6□□□□□ -0.39
DDX39A-212ENST00000590260 COX8CQ7Z4L0 72 aa12.6□□□□□ -0.39
DDX39A-212ENST00000590260 HIST1H2BAQ96A08 127 aa12.6□□□□□ -0.39
DDX39A-212ENST00000590260 ZC2HC1AQ96GY0 325 aa12.6□□□□□ -0.39
DDX39A-212ENST00000590260 SDF2L1Q9HCN8 221 aa12.6□□□□□ -0.39
DDX39A-212ENST00000590260 RNASE3P12724 160 aaKnown RBP12.59□□□□□ -0.39
DDX39A-212ENST00000590260 CRYBA4P53673 196 aa12.59□□□□□ -0.39
DDX39A-212ENST00000590260 FAM3BP58499 235 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-212ENST00000590260 SAPCD1Q5SSQ6 148 aa12.59□□□□□ -0.39
DDX39A-212ENST00000590260 KCNS1Q96KK3 526 aa12.59□□□□□ -0.39
DDX39A-212ENST00000590260 C9orf85Q96MD7 179 aa12.59□□□□□ -0.39
DDX39A-212ENST00000590260 A0A1B0GVG6 124 aa12.58□□□□□ -0.4
DDX39A-212ENST00000590260 M0R2P5 195 aa12.58□□□□□ -0.4
DDX39A-212ENST00000590260 H2AFB1P0C5Y9 115 aa12.58□□□□□ -0.4
DDX39A-212ENST00000590260 CST9LP1Q5W188 147 aa12.58□□□□□ -0.4
DDX39A-212ENST00000590260 TRBV6-1A0A0K0K1D8 114 aa12.57□□□□□ -0.4
DDX39A-212ENST00000590260 EIF5AP63241 154 aaKnown RBP12.57□□□□□ -0.4
DDX39A-212ENST00000590260 C9orf62Q8N4C0 152 aa12.57□□□□□ -0.4
DDX39A-212ENST00000590260 PRO0255Q9UI72 69 aa12.57□□□□□ -0.4
DDX39A-212ENST00000590260 HHLA3Q9XRX5 114 aa12.57□□□□□ -0.4
DDX39A-212ENST00000590260 A0A1B0GVY2 172 aa12.56□□□□□ -0.4
DDX39A-212ENST00000590260 SCO2A0A1W2PP80 73 aa12.56□□□□□ -0.4
DDX39A-212ENST00000590260 LTAP01374 205 aa12.56□□□□□ -0.4
DDX39A-212ENST00000590260 PPT1P50897 306 aa12.56□□□□□ -0.4
DDX39A-212ENST00000590260 CCL18P55774 89 aa12.56□□□□□ -0.4
DDX39A-212ENST00000590260 ZFP69Q49AA0 526 aa12.56□□□□□ -0.4
DDX39A-212ENST00000590260 FMC1Q96HJ9 113 aa12.56□□□□□ -0.4
DDX39A-212ENST00000590260 KRTAP1-5Q9BYS1 174 aa12.56□□□□□ -0.4
DDX39A-212ENST00000590260 TRAV4A0A0B4J268 109 aa12.55□□□□□ -0.4
DDX39A-212ENST00000590260 PGPEP1LA6NFU8 196 aa12.55□□□□□ -0.4
DDX39A-212ENST00000590260 PAX4O43316 350 aa12.55□□□□□ -0.4
DDX39A-212ENST00000590260 SULT1A2P50226 295 aa12.55□□□□□ -0.4
DDX39A-212ENST00000590260 AKAP14Q86UN6 197 aa12.55□□□□□ -0.4
DDX39A-212ENST00000590260 TCEAL7Q9BRU2 100 aa12.55□□□□□ -0.4
DDX39A-212ENST00000590260 DNAH11Q96DT5 4516 aa12.55□□□□□ -0.4
DDX39A-212ENST00000590260 TRAV1-1A0A0B4J248 108 aa12.54□□□□□ -0.4
DDX39A-212ENST00000590260 NBDYA0A0U1RRE5 68 aa12.54□□□□□ -0.4
DDX39A-212ENST00000590260 FABP5P3A8MUU1 101 aa12.54□□□□□ -0.4
DDX39A-212ENST00000590260 SH2D1AO60880 128 aa12.54□□□□□ -0.4
DDX39A-212ENST00000590260 UPK3BQ9BT76 320 aa12.54□□□□□ -0.4
DDX39A-212ENST00000590260 ZFP30Q9Y2G7 519 aa12.54□□□□□ -0.4
DDX39A-212ENST00000590260 MRPS16Q9Y3D3 137 aaKnown RBP12.54□□□□□ -0.4
DDX39A-212ENST00000590260 DYNC1H1Q14204 4646 aaKnown RBP12.53□□□□□ -0.4
DDX39A-212ENST00000590260 LOC100131303A0A0U1RQF7 123 aa12.53□□□□□ -0.4
DDX39A-212ENST00000590260 C9JCJ5 164 aa12.53□□□□□ -0.4
DDX39A-212ENST00000590260 ZNF674Q2M3X9 581 aa12.53□□□□□ -0.4
DDX39A-212ENST00000590260 ZNF506Q5JVG8 444 aa12.53□□□□□ -0.4
DDX39A-212ENST00000590260 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
DDX39A-212ENST00000590260 TRGV4A0A0C4DH28 118 aa12.52□□□□□ -0.41
DDX39A-212ENST00000590260 KRBOX1C9JBD0 128 aa12.52□□□□□ -0.41
DDX39A-212ENST00000590260 RS1O15537 224 aa12.52□□□□□ -0.41
DDX39A-212ENST00000590260 AKR1C3P42330 323 aa12.52□□□□□ -0.41
DDX39A-212ENST00000590260 UBE2G1P62253 170 aa12.52□□□□□ -0.41
DDX39A-212ENST00000590260 ZNF876PQ49A33 203 aa12.52□□□□□ -0.41
DDX39A-212ENST00000590260 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.41
DDX39A-212ENST00000590260 SLC51BQ86UW2 128 aa12.52□□□□□ -0.41
DDX39A-212ENST00000590260 OR4C5Q8NGB2 326 aa12.52□□□□□ -0.41
DDX39A-212ENST00000590260 PTH2Q96A98 100 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms