RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 SACSQ9NZJ4 4579 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 TRGV1A0A0A0MS02 117 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 GAGE12BA1L429 117 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 PDE6DO43924 150 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 GAGE7O76087 117 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 ATP5G1P05496 136 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 GAGE12FP0CL80 117 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 GAGE12GP0CL81 117 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 GAGE12IP0CL82 117 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 TCTAP57738 103 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 LINC00612Q8N6U2 182 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 C11orf52Q96A22 123 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 VAX2Q9UIW0 290 aa15.1■□□□□ 0.01
ATG4D-212ENST00000590096 FABP5P3A8MUU1 101 aa15.09■□□□□ 0.01
ATG4D-212ENST00000590096 TYMSP04818 313 aa15.09■□□□□ 0.01
ATG4D-212ENST00000590096 Q6ZTI0 123 aa15.09■□□□□ 0.01
ATG4D-212ENST00000590096 ZC2HC1AQ96GY0 325 aa15.09■□□□□ 0.01
ATG4D-212ENST00000590096 MDFICQ9P1T7 246 aa15.09■□□□□ 0.01
ATG4D-212ENST00000590096 RYR2Q92736 4967 aa15.09■□□□□ 0.01
ATG4D-212ENST00000590096 IGHV4-4A0A075B6R2 117 aa15.08■□□□□ 0
ATG4D-212ENST00000590096 GNRH2O43555 120 aa15.08■□□□□ 0
ATG4D-212ENST00000590096 SPINK4O60575 86 aa15.08■□□□□ 0
ATG4D-212ENST00000590096 COX8CQ7Z4L0 72 aa15.08■□□□□ 0
ATG4D-212ENST00000590096 SPXQ9BT56 116 aa15.08■□□□□ 0
ATG4D-212ENST00000590096 C11orf21Q9P2W6 132 aa15.08■□□□□ 0
ATG4D-212ENST00000590096 TRGV2A0A075B6R0 118 aa15.07■□□□□ 0
ATG4D-212ENST00000590096 RPL35P42766 123 aaKnown RBP15.07■□□□□ 0
ATG4D-212ENST00000590096 LGALS9BQ3B8N2 356 aa15.07■□□□□ 0
ATG4D-212ENST00000590096 FAM162BQ5T6X4 162 aa15.07■□□□□ 0
ATG4D-212ENST00000590096 BAGE2Q86Y30 109 aa15.07■□□□□ 0
ATG4D-212ENST00000590096 LYPD6BQ8NI32 183 aa15.07■□□□□ 0
ATG4D-212ENST00000590096 IGHV3-16A0A0C4DH30 117 aa15.06■□□□□ 0
ATG4D-212ENST00000590096 F5H768 121 aa15.06■□□□□ 0
ATG4D-212ENST00000590096 TEX261Q6UWH6 196 aa15.06■□□□□ 0
ATG4D-212ENST00000590096 NHLRC2Q8NBF2 726 aa15.06■□□□□ 0
ATG4D-212ENST00000590096 FAM210BQ96KR6 192 aa15.06■□□□□ 0
ATG4D-212ENST00000590096 NDUFAF3Q9BU61 184 aa15.06■□□□□ 0
ATG4D-212ENST00000590096 LCE6AA0A183 80 aa15.05■□□□□ -0
ATG4D-212ENST00000590096 DERL1Q9BUN8 251 aa15.05■□□□□ -0
ATG4D-212ENST00000590096 MED9Q9NWA0 146 aa15.05■□□□□ -0
ATG4D-212ENST00000590096 MRPL16Q9NX20 251 aaKnown RBP15.05■□□□□ -0
ATG4D-212ENST00000590096 SH2D1AO60880 128 aa15.04■□□□□ -0
ATG4D-212ENST00000590096 ORM1P02763 201 aa15.04■□□□□ -0
ATG4D-212ENST00000590096 ZNF674Q2M3X9 581 aa15.04■□□□□ -0
ATG4D-212ENST00000590096 APLNQ9ULZ1 77 aa15.04■□□□□ -0
ATG4D-212ENST00000590096 RBFOX3A6NFN3 312 aa15.03■□□□□ -0
ATG4D-212ENST00000590096 CRIP1P50238 77 aa15.03■□□□□ -0
ATG4D-212ENST00000590096 C18orf15Q96N68 181 aa15.03■□□□□ -0
ATG4D-212ENST00000590096 LYSTQ99698 3801 aa15.03■□□□□ -0
ATG4D-212ENST00000590096 ALMS1Q8TCU4 4167 aa15.02■□□□□ -0
ATG4D-212ENST00000590096 IGKV3D-20A0A0C4DH25 116 aa15.02■□□□□ -0
ATG4D-212ENST00000590096 B4DEV8 164 aa15.02■□□□□ -0
ATG4D-212ENST00000590096 TMEM88Q6PEY1 159 aa15.02■□□□□ -0
ATG4D-212ENST00000590096 MLST8Q9BVC4 326 aa15.02■□□□□ -0
ATG4D-212ENST00000590096 M0R2P5 195 aa15.01□□□□□ -0.01
ATG4D-212ENST00000590096 S100A4P26447 101 aaKnown RBP15.01□□□□□ -0.01
ATG4D-212ENST00000590096 GNG4P50150 75 aa15.01□□□□□ -0.01
ATG4D-212ENST00000590096 OR5I1Q13606 314 aa15.01□□□□□ -0.01
ATG4D-212ENST00000590096 CENPWQ5EE01 88 aa15.01□□□□□ -0.01
ATG4D-212ENST00000590096 ZNF506Q5JVG8 444 aa15.01□□□□□ -0.01
ATG4D-212ENST00000590096 LINC00476Q8WZB0 136 aa15.01□□□□□ -0.01
ATG4D-212ENST00000590096 M0R036 132 aa15□□□□□ -0.01
ATG4D-212ENST00000590096 ASIPP42127 132 aa15□□□□□ -0.01
ATG4D-212ENST00000590096 TOR2AQ5JU69 321 aa15□□□□□ -0.01
ATG4D-212ENST00000590096 PRR27Q6MZM9 219 aa15□□□□□ -0.01
ATG4D-212ENST00000590096 RASL10AQ92737 203 aa15□□□□□ -0.01
ATG4D-212ENST00000590096 EIF5A2Q9GZV4 153 aaKnown RBP15□□□□□ -0.01
ATG4D-212ENST00000590096 RAB19A4D1S5 217 aa14.99□□□□□ -0.01
ATG4D-212ENST00000590096 LY6G6CO95867 125 aa14.99□□□□□ -0.01
ATG4D-212ENST00000590096 LINC01559Q495D7 138 aa14.99□□□□□ -0.01
ATG4D-212ENST00000590096 DNAH1Q9P2D7 4330 aa14.98□□□□□ -0.01
ATG4D-212ENST00000590096 KRBOX1C9JBD0 128 aa14.98□□□□□ -0.01
ATG4D-212ENST00000590096 MGST1P10620 155 aaKnown RBP14.98□□□□□ -0.01
ATG4D-212ENST00000590096 C15orf53Q8NAA6 179 aa14.98□□□□□ -0.01
ATG4D-212ENST00000590096 PCNPQ8WW12 178 aaKnown RBP14.98□□□□□ -0.01
ATG4D-212ENST00000590096 SMIM12Q96EX1 92 aa14.98□□□□□ -0.01
ATG4D-212ENST00000590096 C9orf85Q96MD7 179 aa14.98□□□□□ -0.01
ATG4D-212ENST00000590096 FAM210AQ96ND0 272 aa14.98□□□□□ -0.01
ATG4D-212ENST00000590096 TMEM250H0YL14 139 aa14.97□□□□□ -0.01
ATG4D-212ENST00000590096 IGHV3-53P01767 116 aa14.97□□□□□ -0.01
ATG4D-212ENST00000590096 RNASE3P12724 160 aaKnown RBP14.97□□□□□ -0.01
ATG4D-212ENST00000590096 HOXA5P20719 270 aa14.97□□□□□ -0.01
ATG4D-212ENST00000590096 LGALS9CQ6DKI2 356 aa14.97□□□□□ -0.01
ATG4D-212ENST00000590096 TMSB15BA0A087X1C1 80 aa14.96□□□□□ -0.01
ATG4D-212ENST00000590096 C9JCJ5 164 aa14.96□□□□□ -0.01
ATG4D-212ENST00000590096 MUC4Q99102 2169 aa14.95□□□□□ -0.02
ATG4D-212ENST00000590096 TRAV26-1A0A087WT03 109 aa14.95□□□□□ -0.02
ATG4D-212ENST00000590096 GRIFINA4D1Z8 144 aa14.95□□□□□ -0.02
ATG4D-212ENST00000590096 H3BVH4 76 aa14.95□□□□□ -0.02
ATG4D-212ENST00000590096 ZNF876PQ49A33 203 aa14.95□□□□□ -0.02
ATG4D-212ENST00000590096 BIN3Q9NQY0 253 aa14.95□□□□□ -0.02
ATG4D-212ENST00000590096 TRAV4A0A0B4J268 109 aa14.94□□□□□ -0.02
ATG4D-212ENST00000590096 NDUFS6O75380 124 aaKnown RBP14.94□□□□□ -0.02
ATG4D-212ENST00000590096 IGLV2-8P01709 118 aa14.94□□□□□ -0.02
ATG4D-212ENST00000590096 CEBPGP53567 150 aa14.94□□□□□ -0.02
ATG4D-212ENST00000590096 DNLZQ5SXM8 178 aa14.94□□□□□ -0.02
ATG4D-212ENST00000590096 OR4C5Q8NGB2 326 aa14.94□□□□□ -0.02
ATG4D-212ENST00000590096 DAZAP1Q96EP5 407 aaKnown RBP14.94□□□□□ -0.02
ATG4D-212ENST00000590096 PARLQ9H300 379 aa14.94□□□□□ -0.02
ATG4D-212ENST00000590096 IL36BQ9NZH7 164 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms