RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 TRBV6-1A0A0K0K1D8 114 aa12.28□□□□□ -0.44
H3F3B-207ENST00000589417 PFN1P07737 140 aaKnown RBP12.28□□□□□ -0.44
H3F3B-207ENST00000589417 ZNF80P51504 273 aaPredicted RBP12.28□□□□□ -0.44
H3F3B-207ENST00000589417 FAM3BP58499 235 aaPredicted RBP12.28□□□□□ -0.44
H3F3B-207ENST00000589417 TMEM183BQ1AE95 376 aa12.28□□□□□ -0.44
H3F3B-207ENST00000589417 PRNTQ86SH4 94 aa12.28□□□□□ -0.44
H3F3B-207ENST00000589417 AKAP14Q86UN6 197 aa12.28□□□□□ -0.44
H3F3B-207ENST00000589417 TMEM183AQ8IXX5 376 aa12.28□□□□□ -0.44
H3F3B-207ENST00000589417 LINC00479Q96M42 142 aa12.28□□□□□ -0.44
H3F3B-207ENST00000589417 C8orf49Q96NF6 230 aa12.28□□□□□ -0.44
H3F3B-207ENST00000589417 TRGV2A0A075B6R0 118 aa12.27□□□□□ -0.45
H3F3B-207ENST00000589417 IGHV3-16A0A0C4DH30 117 aa12.27□□□□□ -0.45
H3F3B-207ENST00000589417 H2AFB1P0C5Y9 115 aa12.27□□□□□ -0.45
H3F3B-207ENST00000589417 SLC51BQ86UW2 128 aa12.27□□□□□ -0.45
H3F3B-207ENST00000589417 ZFP30Q9Y2G7 519 aa12.27□□□□□ -0.45
H3F3B-207ENST00000589417 TRAV34A0A0B4J273 112 aa12.26□□□□□ -0.45
H3F3B-207ENST00000589417 GNRH2O43555 120 aa12.26□□□□□ -0.45
H3F3B-207ENST00000589417 GCGP01275 180 aa12.26□□□□□ -0.45
H3F3B-207ENST00000589417 OR5I1Q13606 314 aa12.26□□□□□ -0.45
H3F3B-207ENST00000589417 ZFP69Q49AA0 526 aa12.26□□□□□ -0.45
H3F3B-207ENST00000589417 SDF2L1Q9HCN8 221 aa12.26□□□□□ -0.45
H3F3B-207ENST00000589417 C11orf21Q9P2W6 132 aa12.26□□□□□ -0.45
H3F3B-207ENST00000589417 DNAH10Q8IVF4 4471 aa12.26□□□□□ -0.45
H3F3B-207ENST00000589417 TRAV26-1A0A087WT03 109 aa12.25□□□□□ -0.45
H3F3B-207ENST00000589417 PAGE4O60829 102 aa12.25□□□□□ -0.45
H3F3B-207ENST00000589417 TYMSP04818 313 aa12.25□□□□□ -0.45
H3F3B-207ENST00000589417 SULT1A2P50226 295 aa12.25□□□□□ -0.45
H3F3B-207ENST00000589417 FMC1Q96HJ9 113 aa12.25□□□□□ -0.45
H3F3B-207ENST00000589417 MRPL16Q9NX20 251 aaKnown RBP12.25□□□□□ -0.45
H3F3B-207ENST00000589417 SLAQ13239 276 aa12.24□□□□□ -0.45
H3F3B-207ENST00000589417 CST9LP1Q5W188 147 aa12.24□□□□□ -0.45
H3F3B-207ENST00000589417 Q86TA4 180 aa12.24□□□□□ -0.45
H3F3B-207ENST00000589417 C9orf62Q8N4C0 152 aa12.24□□□□□ -0.45
H3F3B-207ENST00000589417 PTH2Q96A98 100 aa12.24□□□□□ -0.45
H3F3B-207ENST00000589417 VSIG2Q96IQ7 327 aa12.24□□□□□ -0.45
H3F3B-207ENST00000589417 NAGKQ9UJ70 344 aa12.24□□□□□ -0.45
H3F3B-207ENST00000589417 FABP5P3A8MUU1 101 aa12.23□□□□□ -0.45
H3F3B-207ENST00000589417 M0R2P5 195 aa12.23□□□□□ -0.45
H3F3B-207ENST00000589417 EPPK1P58107 5090 aaKnown RBP12.22□□□□□ -0.45
H3F3B-207ENST00000589417 hCG_2014768A0A024R1R8 64 aa12.22□□□□□ -0.45
H3F3B-207ENST00000589417 NUDT3O95989 172 aa12.22□□□□□ -0.45
H3F3B-207ENST00000589417 LTAP01374 205 aa12.22□□□□□ -0.45
H3F3B-207ENST00000589417 S100A9P06702 114 aaKnown RBP12.22□□□□□ -0.45
H3F3B-207ENST00000589417 FHL2Q14192 279 aa12.22□□□□□ -0.45
H3F3B-207ENST00000589417 UBE2DNLQ8IWF7 75 aa12.22□□□□□ -0.45
H3F3B-207ENST00000589417 MUC4Q99102 2169 aa12.22□□□□□ -0.45
H3F3B-207ENST00000589417 CRIP1P50238 77 aa12.21□□□□□ -0.45
H3F3B-207ENST00000589417 CCL18P55774 89 aa12.21□□□□□ -0.45
H3F3B-207ENST00000589417 C9orf85Q96MD7 179 aa12.21□□□□□ -0.45
H3F3B-207ENST00000589417 TXNDC17Q9BRA2 123 aa12.21□□□□□ -0.45
H3F3B-207ENST00000589417 PRO0255Q9UI72 69 aa12.21□□□□□ -0.45
H3F3B-207ENST00000589417 IGKV3D-20A0A0C4DH25 116 aa12.2□□□□□ -0.46
H3F3B-207ENST00000589417 UBE2G1P62253 170 aa12.2□□□□□ -0.46
H3F3B-207ENST00000589417 CCL20P78556 96 aa12.2□□□□□ -0.46
H3F3B-207ENST00000589417 DNLZQ5SXM8 178 aa12.2□□□□□ -0.46
H3F3B-207ENST00000589417 Q6ZR54 194 aa12.2□□□□□ -0.46
H3F3B-207ENST00000589417 MANBALQ9NQG1 85 aa12.2□□□□□ -0.46
H3F3B-207ENST00000589417 TRAV4A0A0B4J268 109 aa12.19□□□□□ -0.46
H3F3B-207ENST00000589417 A0A0J9YY99 117 aa12.19□□□□□ -0.46
H3F3B-207ENST00000589417 TEX46H3BTG2 121 aa12.19□□□□□ -0.46
H3F3B-207ENST00000589417 AKR1C3P42330 323 aa12.19□□□□□ -0.46
H3F3B-207ENST00000589417 CRYBA4P53673 196 aa12.19□□□□□ -0.46
H3F3B-207ENST00000589417 ZNF674Q2M3X9 581 aa12.19□□□□□ -0.46
H3F3B-207ENST00000589417 ZC2HC1AQ96GY0 325 aa12.19□□□□□ -0.46
H3F3B-207ENST00000589417 HHLA3Q9XRX5 114 aa12.19□□□□□ -0.46
H3F3B-207ENST00000589417 LINC00588Q9Y4M8 146 aa12.19□□□□□ -0.46
H3F3B-207ENST00000589417 A0A096LPF7 62 aa12.18□□□□□ -0.46
H3F3B-207ENST00000589417 A0A1B0GV50 99 aa12.18□□□□□ -0.46
H3F3B-207ENST00000589417 CIDEAO60543 219 aa12.18□□□□□ -0.46
H3F3B-207ENST00000589417 RNASE3P12724 160 aaKnown RBP12.18□□□□□ -0.46
H3F3B-207ENST00000589417 PIK3CD-AS1Q5SR53 167 aa12.18□□□□□ -0.46
H3F3B-207ENST00000589417 ZNRF2Q8NHG8 242 aa12.18□□□□□ -0.46
H3F3B-207ENST00000589417 ZNF479Q96JC4 524 aa12.18□□□□□ -0.46
H3F3B-207ENST00000589417 MLST8Q9BVC4 326 aa12.18□□□□□ -0.46
H3F3B-207ENST00000589417 DNAH2Q9P225 4427 aa12.18□□□□□ -0.46
H3F3B-207ENST00000589417 FRAS1Q86XX4 4008 aa12.17□□□□□ -0.46
H3F3B-207ENST00000589417 A0A1B0GVG6 124 aa12.17□□□□□ -0.46
H3F3B-207ENST00000589417 PAX4O43316 350 aa12.17□□□□□ -0.46
H3F3B-207ENST00000589417 IGHV3-53P01767 116 aa12.17□□□□□ -0.46
H3F3B-207ENST00000589417 FAM162BQ5T6X4 162 aa12.17□□□□□ -0.46
H3F3B-207ENST00000589417 ZNF575Q86XF7 245 aa12.17□□□□□ -0.46
H3F3B-207ENST00000589417 C11orf52Q96A22 123 aa12.17□□□□□ -0.46
H3F3B-207ENST00000589417 UPK3BQ9BT76 320 aa12.17□□□□□ -0.46
H3F3B-207ENST00000589417 SCO2A0A1W2PP80 73 aa12.16□□□□□ -0.46
H3F3B-207ENST00000589417 KRBOX1C9JBD0 128 aa12.16□□□□□ -0.46
H3F3B-207ENST00000589417 ESRGQ1W209 222 aa12.16□□□□□ -0.46
H3F3B-207ENST00000589417 ZNF876PQ49A33 203 aa12.16□□□□□ -0.46
H3F3B-207ENST00000589417 GNG13Q9P2W3 67 aa12.16□□□□□ -0.46
H3F3B-207ENST00000589417 BIRC6Q9NR09 4857 aa12.15□□□□□ -0.46
H3F3B-207ENST00000589417 SH2D1AO60880 128 aa12.15□□□□□ -0.46
H3F3B-207ENST00000589417 SFTA3P0C7M3 94 aa12.15□□□□□ -0.46
H3F3B-207ENST00000589417 OR4C5Q8NGB2 326 aa12.15□□□□□ -0.46
H3F3B-207ENST00000589417 IL36BQ9NZH7 164 aa12.15□□□□□ -0.46
H3F3B-207ENST00000589417 TRGV4A0A0C4DH28 118 aa12.14□□□□□ -0.47
H3F3B-207ENST00000589417 RS1O15537 224 aa12.14□□□□□ -0.47
H3F3B-207ENST00000589417 ORM1P02763 201 aa12.14□□□□□ -0.47
H3F3B-207ENST00000589417 LINC01559Q495D7 138 aa12.14□□□□□ -0.47
H3F3B-207ENST00000589417 BAGE2Q86Y30 109 aa12.14□□□□□ -0.47
H3F3B-207ENST00000589417 MRPS16Q9Y3D3 137 aaKnown RBP12.14□□□□□ -0.47
H3F3B-207ENST00000589417 ICOSQ9Y6W8 199 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms