RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 INSIG2Q9Y5U4 225 aa3.22□□□□□ -1.89
LIG3-211ENST00000588713 ARHGAP32A7KAX9 2087 aa3.22□□□□□ -1.89
LIG3-211ENST00000588713 PKHD1P08F94 4074 aa3.22□□□□□ -1.89
LIG3-211ENST00000588713 DNAH11Q96DT5 4516 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 A0A096LNJ9 63 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 TRAV5A0A0B4J249 113 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 SERTM2A0A1B0GWG4 89 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 PGPA6NDG6 321 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 LINC01546A6NGU7 62 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 FBLL1A6NHQ2 334 aaKnown RBP3.21□□□□□ -1.9
LIG3-211ENST00000588713 H0Y8G0 127 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 NCR2O95944 276 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 SMIM13P0DJ93 91 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 AZU1P20160 251 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 FCGR2BP31994 310 aaPredicted RBP3.21□□□□□ -1.9
LIG3-211ENST00000588713 ZNF137PP52743 207 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 CACNG7P62955 275 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 LTC4SQ16873 150 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 ALKBH6Q3KRA9 238 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 CD300EQ496F6 205 aaPredicted RBP3.21□□□□□ -1.9
LIG3-211ENST00000588713 PATE2Q6UY27 113 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 LINC00305Q7Z4B0 112 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 MOB3BQ86TA1 216 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 C8orf31Q8N9H6 132 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 RFESDQ8TAC1 157 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 TMEM167AQ8TBQ9 72 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 ARPC1AQ92747 370 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 TIMD4Q96H15 378 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 LINC00479Q96M42 142 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 HARBI1Q96MB7 349 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 VGLL1Q99990 258 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 DCTN5Q9BTE1 182 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 CHAC1Q9BUX1 264 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 Q9H3A6 140 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 SPANXB1Q9NS25 103 aaPredicted RBP3.21□□□□□ -1.9
LIG3-211ENST00000588713 HILPDAQ9Y5L2 63 aa3.21□□□□□ -1.9
LIG3-211ENST00000588713 KMT2AQ03164 3969 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 IGHV1-18A0A0C4DH31 117 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 A0A1W2PRD5 423 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 A0A1W2PRF3 423 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 A0A1W2PRM7 423 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 hADV38S2A0JD32 116 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 GAGE12HA6NDE8 117 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 E9PLD3 99 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 K7EQM0 130 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 GNG7O60262 68 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 ATP5LO75964 103 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 IGLV1-44P01699 117 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 CRYGCP07315 174 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 ARMS2P0C7Q2 107 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 MYOD1P15172 320 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 ZNF134P52741 427 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 PAX8Q06710 450 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 KLRD1Q13241 179 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 LINC00322Q6ZN03 302 aaPredicted RBP3.2□□□□□ -1.9
LIG3-211ENST00000588713 ORMDL3Q8N138 153 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 LYPD1Q8N2G4 141 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 TTC9CQ8N5M4 171 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 FAM169BQ8N8A8 192 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 OR8A1Q8NGG7 326 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 PRSS3P2Q8NHM4 247 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 PHLDA1Q8WV24 401 aaPredicted RBP3.2□□□□□ -1.9
LIG3-211ENST00000588713 IFI27L1Q96BM0 104 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 CLUHP3Q96NS8 147 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 TM2D2Q9BX73 214 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 SLC25A39Q9BZJ4 359 aaPredicted RBP3.2□□□□□ -1.9
LIG3-211ENST00000588713 VCX2Q9H322 139 aa3.2□□□□□ -1.9
LIG3-211ENST00000588713 TSSC4Q9Y5U2 329 aaPredicted RBP3.2□□□□□ -1.9
LIG3-211ENST00000588713 A0A1B0GWB2 263 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 H3BRN7 92 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 LHBP01229 141 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 IGLV2-11P01706 119 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 TFF1P04155 84 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 IGKV1-16P04430 117 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 CSN3P07498 182 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 CECR9P0C854 216 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 EVI2AP22794 236 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 GCSHP23434 173 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 NMUP48645 174 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 RAB9AP51151 201 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 FXYD2P54710 66 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 CKS1BP61024 79 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 CCL8P80075 99 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 SSBP2P81877 361 aaPredicted RBP3.19□□□□□ -1.9
LIG3-211ENST00000588713 RPL24P83731 157 aaKnown RBP3.19□□□□□ -1.9
LIG3-211ENST00000588713 WT1-ASQ06250 92 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 MEF2CQ06413 473 aaPredicted RBP3.19□□□□□ -1.9
LIG3-211ENST00000588713 SMAGPQ0VAQ4 97 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 ODF1Q14990 250 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 PLGLAQ15195 96 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 TWIST1Q15672 202 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 C3orf36Q3SXR2 165 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 VMA21Q3ZAQ7 101 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 LYRM7Q5U5X0 104 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 FAM104BQ5XKR9 115 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 CCDC144NLQ6NUI1 221 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 COX8CQ7Z4L0 72 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 S100A7AQ86SG5 101 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 CEND1Q8N111 149 aa3.19□□□□□ -1.9
LIG3-211ENST00000588713 TMEM116Q8NCL8 245 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms