RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 GAGE7O76087 117 aa14.26□□□□□ -0.13
DDX39A-207ENST00000588542 PFN1P07737 140 aaKnown RBP14.26□□□□□ -0.13
DDX39A-207ENST00000588542 GAGE12FP0CL80 117 aa14.26□□□□□ -0.13
DDX39A-207ENST00000588542 GAGE12GP0CL81 117 aa14.26□□□□□ -0.13
DDX39A-207ENST00000588542 GAGE12IP0CL82 117 aa14.26□□□□□ -0.13
DDX39A-207ENST00000588542 AKR1C3P42330 323 aa14.26□□□□□ -0.13
DDX39A-207ENST00000588542 TCTAP57738 103 aa14.26□□□□□ -0.13
DDX39A-207ENST00000588542 UBE2G1P62253 170 aa14.26□□□□□ -0.13
DDX39A-207ENST00000588542 COX8CQ7Z4L0 72 aa14.26□□□□□ -0.13
DDX39A-207ENST00000588542 TMEM183AQ8IXX5 376 aa14.26□□□□□ -0.13
DDX39A-207ENST00000588542 ZFP30Q9Y2G7 519 aa14.26□□□□□ -0.13
DDX39A-207ENST00000588542 ZNF415Q09FC8 603 aa14.25□□□□□ -0.13
DDX39A-207ENST00000588542 TRGV11A0A075B6L2 103 aa14.24□□□□□ -0.13
DDX39A-207ENST00000588542 LTAP01374 205 aa14.24□□□□□ -0.13
DDX39A-207ENST00000588542 TYMSP04818 313 aa14.24□□□□□ -0.13
DDX39A-207ENST00000588542 ATP5G1P05496 136 aa14.24□□□□□ -0.13
DDX39A-207ENST00000588542 LINC00476Q8WZB0 136 aa14.24□□□□□ -0.13
DDX39A-207ENST00000588542 ZC2HC1AQ96GY0 325 aa14.24□□□□□ -0.13
DDX39A-207ENST00000588542 TRGV1A0A0A0MS02 117 aa14.23□□□□□ -0.13
DDX39A-207ENST00000588542 IGHV3-16A0A0C4DH30 117 aa14.23□□□□□ -0.13
DDX39A-207ENST00000588542 CRIP1P50238 77 aa14.23□□□□□ -0.13
DDX39A-207ENST00000588542 C11orf52Q96A22 123 aa14.23□□□□□ -0.13
DDX39A-207ENST00000588542 KCNS1Q96KK3 526 aa14.23□□□□□ -0.13
DDX39A-207ENST00000588542 FAM210BQ96KR6 192 aa14.23□□□□□ -0.13
DDX39A-207ENST00000588542 TXNDC17Q9BRA2 123 aa14.23□□□□□ -0.13
DDX39A-207ENST00000588542 SDF2L1Q9HCN8 221 aa14.23□□□□□ -0.13
DDX39A-207ENST00000588542 MUC4Q99102 2169 aa14.23□□□□□ -0.13
DDX39A-207ENST00000588542 KMT2AQ03164 3969 aa14.22□□□□□ -0.13
DDX39A-207ENST00000588542 S100A9P06702 114 aaKnown RBP14.22□□□□□ -0.13
DDX39A-207ENST00000588542 BLOC1S1P78537 153 aa14.22□□□□□ -0.13
DDX39A-207ENST00000588542 LYPD6BQ8NI32 183 aa14.22□□□□□ -0.13
DDX39A-207ENST00000588542 C18orf15Q96N68 181 aa14.22□□□□□ -0.13
DDX39A-207ENST00000588542 MRPL16Q9NX20 251 aaKnown RBP14.22□□□□□ -0.13
DDX39A-207ENST00000588542 FABP5P3A8MUU1 101 aa14.21□□□□□ -0.13
DDX39A-207ENST00000588542 F5H768 121 aa14.21□□□□□ -0.13
DDX39A-207ENST00000588542 IFNA1P01562 189 aa14.21□□□□□ -0.13
DDX39A-207ENST00000588542 BCL2P10415 239 aa14.21□□□□□ -0.13
DDX39A-207ENST00000588542 MEF2BQ02080 365 aaPredicted RBP14.21□□□□□ -0.13
DDX39A-207ENST00000588542 LGALS9BQ3B8N2 356 aa14.21□□□□□ -0.13
DDX39A-207ENST00000588542 TMEM88Q6PEY1 159 aa14.21□□□□□ -0.13
DDX39A-207ENST00000588542 NDUFAF3Q9BU61 184 aa14.21□□□□□ -0.13
DDX39A-207ENST00000588542 SPXQ9BT56 116 aa14.2□□□□□ -0.14
DDX39A-207ENST00000588542 DERL1Q9BUN8 251 aa14.2□□□□□ -0.14
DDX39A-207ENST00000588542 MLST8Q9BVC4 326 aa14.2□□□□□ -0.14
DDX39A-207ENST00000588542 IGKV3D-20A0A0C4DH25 116 aa14.19□□□□□ -0.14
DDX39A-207ENST00000588542 SH2D1AO60880 128 aa14.19□□□□□ -0.14
DDX39A-207ENST00000588542 LY6G6CO95867 125 aa14.19□□□□□ -0.14
DDX39A-207ENST00000588542 HOXA5P20719 270 aa14.19□□□□□ -0.14
DDX39A-207ENST00000588542 ZNF674Q2M3X9 581 aa14.19□□□□□ -0.14
DDX39A-207ENST00000588542 LGALS9CQ6DKI2 356 aa14.19□□□□□ -0.14
DDX39A-207ENST00000588542 NHLRC2Q8NBF2 726 aa14.19□□□□□ -0.14
DDX39A-207ENST00000588542 VAX2Q9UIW0 290 aa14.19□□□□□ -0.14
DDX39A-207ENST00000588542 NACAE9PAV3 2078 aa14.18□□□□□ -0.14
DDX39A-207ENST00000588542 TRGV2A0A075B6R0 118 aa14.18□□□□□ -0.14
DDX39A-207ENST00000588542 RPL35P42766 123 aaKnown RBP14.18□□□□□ -0.14
DDX39A-207ENST00000588542 DNAH6Q9C0G6 4158 aa14.18□□□□□ -0.14
DDX39A-207ENST00000588542 PDE6DO43924 150 aa14.17□□□□□ -0.14
DDX39A-207ENST00000588542 TAGLN2P37802 199 aaKnown RBP14.17□□□□□ -0.14
DDX39A-207ENST00000588542 FAM162BQ5T6X4 162 aa14.17□□□□□ -0.14
DDX39A-207ENST00000588542 ZNF575Q86XF7 245 aa14.17□□□□□ -0.14
DDX39A-207ENST00000588542 BAGE2Q86Y30 109 aa14.17□□□□□ -0.14
DDX39A-207ENST00000588542 RASL10AQ92737 203 aa14.17□□□□□ -0.14
DDX39A-207ENST00000588542 RNASE3P12724 160 aaKnown RBP14.16□□□□□ -0.14
DDX39A-207ENST00000588542 C9orf85Q96MD7 179 aa14.16□□□□□ -0.14
DDX39A-207ENST00000588542 KRBOX1C9JBD0 128 aa14.15□□□□□ -0.14
DDX39A-207ENST00000588542 M0R2P5 195 aa14.15□□□□□ -0.14
DDX39A-207ENST00000588542 ORM1P02763 201 aa14.15□□□□□ -0.14
DDX39A-207ENST00000588542 OR5I1Q13606 314 aa14.15□□□□□ -0.14
DDX39A-207ENST00000588542 TEX261Q6UWH6 196 aa14.15□□□□□ -0.14
DDX39A-207ENST00000588542 B4DEV8 164 aa14.14□□□□□ -0.15
DDX39A-207ENST00000588542 RAB19A4D1S5 217 aa14.13□□□□□ -0.15
DDX39A-207ENST00000588542 RBFOX3A6NFN3 312 aa14.13□□□□□ -0.15
DDX39A-207ENST00000588542 M0R036 132 aa14.13□□□□□ -0.15
DDX39A-207ENST00000588542 IGLV2-8P01709 118 aa14.13□□□□□ -0.15
DDX39A-207ENST00000588542 IGHV3-53P01767 116 aa14.13□□□□□ -0.15
DDX39A-207ENST00000588542 LINC01559Q495D7 138 aa14.13□□□□□ -0.15
DDX39A-207ENST00000588542 CENPWQ5EE01 88 aa14.13□□□□□ -0.15
DDX39A-207ENST00000588542 POM121L12Q8N7R1 296 aa14.13□□□□□ -0.15
DDX39A-207ENST00000588542 C15orf53Q8NAA6 179 aa14.13□□□□□ -0.15
DDX39A-207ENST00000588542 MED9Q9NWA0 146 aa14.13□□□□□ -0.15
DDX39A-207ENST00000588542 TRBV20OR9-2A0A075B6H5 130 aa14.12□□□□□ -0.15
DDX39A-207ENST00000588542 TRAV26-1A0A087WT03 109 aa14.12□□□□□ -0.15
DDX39A-207ENST00000588542 ZNF506Q5JVG8 444 aa14.12□□□□□ -0.15
DDX39A-207ENST00000588542 DNLZQ5SXM8 178 aa14.12□□□□□ -0.15
DDX39A-207ENST00000588542 FHL2Q14192 279 aa14.11□□□□□ -0.15
DDX39A-207ENST00000588542 ZNF479Q96JC4 524 aa14.11□□□□□ -0.15
DDX39A-207ENST00000588542 A0A0J9YY99 117 aa14.1□□□□□ -0.15
DDX39A-207ENST00000588542 GRIFINA4D1Z8 144 aa14.1□□□□□ -0.15
DDX39A-207ENST00000588542 PGPEP1LA6NFU8 196 aa14.1□□□□□ -0.15
DDX39A-207ENST00000588542 SFTA3P0C7M3 94 aa14.1□□□□□ -0.15
DDX39A-207ENST00000588542 ASIPP42127 132 aa14.1□□□□□ -0.15
DDX39A-207ENST00000588542 ZNF876PQ49A33 203 aa14.1□□□□□ -0.15
DDX39A-207ENST00000588542 PCNPQ8WW12 178 aaKnown RBP14.1□□□□□ -0.15
DDX39A-207ENST00000588542 PTH2Q96A98 100 aa14.1□□□□□ -0.15
DDX39A-207ENST00000588542 VSIG2Q96IQ7 327 aa14.1□□□□□ -0.15
DDX39A-207ENST00000588542 TMSB15BA0A087X1C1 80 aa14.09□□□□□ -0.15
DDX39A-207ENST00000588542 TRAV4A0A0B4J268 109 aa14.09□□□□□ -0.15
DDX39A-207ENST00000588542 C9JCJ5 164 aa14.09□□□□□ -0.15
DDX39A-207ENST00000588542 P0DMU3 169 aa14.09□□□□□ -0.15
DDX39A-207ENST00000588542 FAM231AP0DMU4 169 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms