RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 GGTLC3B5MD39 225 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 K7EIM0 57 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 IGHV3-48P01763 117 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 RPS28P62857 69 aaKnown RBP7.5□□□□□ -1.21
LINC01539-201ENST00000587904 UBE2L3P68036 154 aaKnown RBP7.5□□□□□ -1.21
LINC01539-201ENST00000587904 RBPMS2Q6ZRY4 209 aaKnown RBP7.5□□□□□ -1.21
LINC01539-201ENST00000587904 PCP2Q8IVA1 136 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 SBSPONQ8IVN8 264 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 RASL11BQ9BPW5 248 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 ZNF355PQ9NSJ1 428 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 AP5S1Q9NUS5 200 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 PLXNB1O43157 2135 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 IGLV11-55A0A075B6I3 123 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 IGHV7-81A0A0B4J1V7 117 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 HIGD1CA8MV81 97 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 NMUP48645 174 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 FOXA3P55318 350 aaPredicted RBP7.5□□□□□ -1.21
LINC01539-201ENST00000587904 KLK9Q2XQG4 91 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 TM4SF20Q53R12 229 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 CT83Q5H943 113 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 LYRM7Q5U5X0 104 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 PATE2Q6UY27 113 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 KLK9Q9UKQ9 250 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 LRRK2Q5S007 2527 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 AKAP6Q13023 2319 aa7.49□□□□□ -1.21
LINC01539-201ENST00000587904 ABCA2Q9BZC7 2435 aa7.49□□□□□ -1.21
LINC01539-201ENST00000587904 COL8A1P27658 744 aa7.49□□□□□ -1.21
LINC01539-201ENST00000587904 NDPQ00604 133 aa7.49□□□□□ -1.21
LINC01539-201ENST00000587904 ASPHD1Q5U4P2 390 aa7.49□□□□□ -1.21
LINC01539-201ENST00000587904 LINC00305Q7Z4B0 112 aa7.49□□□□□ -1.21
LINC01539-201ENST00000587904 PAXXQ9BUH6 204 aa7.49□□□□□ -1.21
LINC01539-201ENST00000587904 SPANXDQ9BXN6 97 aa7.49□□□□□ -1.21
LINC01539-201ENST00000587904 KLF12Q9Y4X4 402 aa7.49□□□□□ -1.21
LINC01539-201ENST00000587904 HECTD1Q9ULT8 2610 aa7.49□□□□□ -1.21
LINC01539-201ENST00000587904 TRAV40A0A0B4J280 105 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 LINC01619G3V211 115 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 MRPL23Q16540 153 aaKnown RBP7.48□□□□□ -1.21
LINC01539-201ENST00000587904 FAM110DQ8TAY7 271 aaPredicted RBP7.48□□□□□ -1.21
LINC01539-201ENST00000587904 FANCD2OSQ96PS1 177 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 HIGD1AQ9Y241 93 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 MOB4Q9Y3A3 225 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 WNK2Q9Y3S1 2297 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 IGHV3-21A0A0B4J1V1 117 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 IGKV1-17P01599 117 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 ORM2P19652 201 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 MORN5Q5VZ52 161 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 RUSC1-AS1Q66K80 236 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 FAM19A5Q7Z5A7 132 aaPredicted RBP7.48□□□□□ -1.21
LINC01539-201ENST00000587904 TMEM158Q8WZ71 300 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 GFRA4Q9GZZ7 299 aa7.48□□□□□ -1.21
LINC01539-201ENST00000587904 BEX4Q9NWD9 120 aaPredicted RBP7.48□□□□□ -1.21
LINC01539-201ENST00000587904 F5H768 121 aa7.47□□□□□ -1.21
LINC01539-201ENST00000587904 FXYD5Q96DB9 178 aa7.47□□□□□ -1.21
LINC01539-201ENST00000587904 C9JAW5 83 aa7.47□□□□□ -1.21
LINC01539-201ENST00000587904 J3QLI3 93 aa7.47□□□□□ -1.21
LINC01539-201ENST00000587904 APOHP02749 345 aaPredicted RBP7.47□□□□□ -1.21
LINC01539-201ENST00000587904 LINC00694P0DN24 101 aa7.47□□□□□ -1.21
LINC01539-201ENST00000587904 EGR2P11161 476 aaPredicted RBP7.47□□□□□ -1.21
LINC01539-201ENST00000587904 RPL7P18124 248 aaKnown RBP7.47□□□□□ -1.21
LINC01539-201ENST00000587904 LYZP61626 148 aa7.47□□□□□ -1.21
LINC01539-201ENST00000587904 C5orf56Q8N8D9 126 aa7.47□□□□□ -1.21
LINC01539-201ENST00000587904 LINC01356Q8N9X3 169 aa7.47□□□□□ -1.21
LINC01539-201ENST00000587904 ZNF414Q96IQ9 312 aa7.47□□□□□ -1.21
LINC01539-201ENST00000587904 C7orf69Q9H7B7 122 aa7.47□□□□□ -1.21
LINC01539-201ENST00000587904 C21orf62Q9NYP8 219 aa7.47□□□□□ -1.21
LINC01539-201ENST00000587904 TMEM14CQ9P0S9 112 aa7.47□□□□□ -1.21
LINC01539-201ENST00000587904 TRBV25-1A0A075B6N4 114 aa7.46□□□□□ -1.22
LINC01539-201ENST00000587904 TRAV4A0A0B4J268 109 aa7.46□□□□□ -1.22
LINC01539-201ENST00000587904 CHEK1O14757 476 aa7.46□□□□□ -1.22
LINC01539-201ENST00000587904 GP9P14770 177 aa7.46□□□□□ -1.22
LINC01539-201ENST00000587904 CRIP2P52943 208 aaPredicted RBP7.46□□□□□ -1.22
LINC01539-201ENST00000587904 CACNG7P62955 275 aa7.46□□□□□ -1.22
LINC01539-201ENST00000587904 GATD1Q8NB37 220 aa7.46□□□□□ -1.22
LINC01539-201ENST00000587904 OR8A1Q8NGG7 326 aa7.46□□□□□ -1.22
LINC01539-201ENST00000587904 SGK494Q96LW2 274 aa7.46□□□□□ -1.22
LINC01539-201ENST00000587904 A0A096LNT2 108 aa7.45□□□□□ -1.22
LINC01539-201ENST00000587904 A8MWV9 139 aa7.45□□□□□ -1.22
LINC01539-201ENST00000587904 ATP6V0E1O15342 81 aa7.45□□□□□ -1.22
LINC01539-201ENST00000587904 PYYP10082 97 aa7.45□□□□□ -1.22
LINC01539-201ENST00000587904 ZNRF2Q8NHG8 242 aa7.45□□□□□ -1.22
LINC01539-201ENST00000587904 RNF125Q96EQ8 232 aa7.45□□□□□ -1.22
LINC01539-201ENST00000587904 TMEM101Q96IK0 257 aa7.45□□□□□ -1.22
LINC01539-201ENST00000587904 SLC25A39Q9BZJ4 359 aaPredicted RBP7.45□□□□□ -1.22
LINC01539-201ENST00000587904 UTP20O75691 2785 aaKnown RBP7.45□□□□□ -1.22
LINC01539-201ENST00000587904 WI2-2373I1.2A0A1W2PRP0 233 aa7.45□□□□□ -1.22
LINC01539-201ENST00000587904 IGHV4-38-2P0DP08 117 aa7.45□□□□□ -1.22
LINC01539-201ENST00000587904 LOXL1Q08397 574 aaPredicted RBP7.45□□□□□ -1.22
LINC01539-201ENST00000587904 KLF17Q5JT82 389 aaPredicted RBP7.45□□□□□ -1.22
LINC01539-201ENST00000587904 BRD3OSQ6XYD6 125 aa7.45□□□□□ -1.22
LINC01539-201ENST00000587904 SHANK2-AS3Q9BTD1 123 aa7.45□□□□□ -1.22
LINC01539-201ENST00000587904 RPP21Q9H633 154 aaKnown RBP7.45□□□□□ -1.22
LINC01539-201ENST00000587904 H3BRN7 92 aa7.44□□□□□ -1.22
LINC01539-201ENST00000587904 LTAP01374 205 aa7.44□□□□□ -1.22
LINC01539-201ENST00000587904 IL4P05112 153 aa7.44□□□□□ -1.22
LINC01539-201ENST00000587904 MYCNOSP40205 109 aa7.44□□□□□ -1.22
LINC01539-201ENST00000587904 ZNF138P52744 262 aa7.44□□□□□ -1.22
LINC01539-201ENST00000587904 ZNF329Q86UD4 541 aa7.44□□□□□ -1.22
LINC01539-201ENST00000587904 TMEM219Q86XT9 240 aa7.44□□□□□ -1.22
LINC01539-201ENST00000587904 KIR2DL5BQ8NHK3 375 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms