RNA–Protein interactions for RNA: ENST00000586457.1

CLIP3-203, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 1 (best)

Gene CLIP3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-203ENST00000586457 MDFICQ9P1T7 246 aa7.64□□□□□ -1.19
CLIP3-203ENST00000586457 HHLA3Q9XRX5 114 aa7.64□□□□□ -1.19
CLIP3-203ENST00000586457 RYR3Q15413 4870 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 TRAV34A0A0B4J273 112 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 FAM74A7A6NL05 159 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 FABP5P3A8MUU1 101 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 H3BNG1 76 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 M0R2P5 195 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 PFN1P07737 140 aaKnown RBP7.63□□□□□ -1.19
CLIP3-203ENST00000586457 HOXA5P20719 270 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 S100A4P26447 101 aaKnown RBP7.63□□□□□ -1.19
CLIP3-203ENST00000586457 FHITP49789 147 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 TDRG1Q3Y452 100 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 LGALSLQ3ZCW2 172 aaPredicted RBP7.63□□□□□ -1.19
CLIP3-203ENST00000586457 OR4C5Q8NGB2 326 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 C18orf15Q96N68 181 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 C8orf49Q96NF6 230 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 TCEAL7Q9BRU2 100 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 PRO0255Q9UI72 69 aa7.63□□□□□ -1.19
CLIP3-203ENST00000586457 hCG_2014768A0A024R1R8 64 aa7.62□□□□□ -1.19
CLIP3-203ENST00000586457 C9JCJ5 164 aa7.62□□□□□ -1.19
CLIP3-203ENST00000586457 ORM1P02763 201 aa7.62□□□□□ -1.19
CLIP3-203ENST00000586457 RAB5CP51148 216 aa7.62□□□□□ -1.19
CLIP3-203ENST00000586457 AKAP14Q86UN6 197 aa7.62□□□□□ -1.19
CLIP3-203ENST00000586457 TCTE3Q8IZS6 198 aa7.62□□□□□ -1.19
CLIP3-203ENST00000586457 TVP23CQ96ET8 276 aa7.62□□□□□ -1.19
CLIP3-203ENST00000586457 FMC1Q96HJ9 113 aa7.62□□□□□ -1.19
CLIP3-203ENST00000586457 LINC00479Q96M42 142 aa7.62□□□□□ -1.19
CLIP3-203ENST00000586457 ZFP30Q9Y2G7 519 aa7.62□□□□□ -1.19
CLIP3-203ENST00000586457 ICOSQ9Y6W8 199 aa7.62□□□□□ -1.19
CLIP3-203ENST00000586457 ARL2-SNX15V9GYD0 113 aa7.62□□□□□ -1.19
CLIP3-203ENST00000586457 IGHV3-16A0A0C4DH30 117 aa7.61□□□□□ -1.19
CLIP3-203ENST00000586457 PAGE4O60829 102 aa7.61□□□□□ -1.19
CLIP3-203ENST00000586457 TYMSP04818 313 aa7.61□□□□□ -1.19
CLIP3-203ENST00000586457 S100A9P06702 114 aaKnown RBP7.61□□□□□ -1.19
CLIP3-203ENST00000586457 AKR1C3P42330 323 aa7.61□□□□□ -1.19
CLIP3-203ENST00000586457 ZNF876PQ49A33 203 aa7.61□□□□□ -1.19
CLIP3-203ENST00000586457 LINC00336Q6ZUF6 198 aa7.61□□□□□ -1.19
CLIP3-203ENST00000586457 MBD3L1Q8WWY6 194 aa7.61□□□□□ -1.19
CLIP3-203ENST00000586457 RASL10AQ92737 203 aa7.61□□□□□ -1.19
CLIP3-203ENST00000586457 ALMS1Q8TCU4 4167 aa7.61□□□□□ -1.19
CLIP3-203ENST00000586457 IGLV2-11P01706 119 aa7.6□□□□□ -1.19
CLIP3-203ENST00000586457 C1QBP02746 253 aa7.6□□□□□ -1.19
CLIP3-203ENST00000586457 MRPL23Q16540 153 aaKnown RBP7.6□□□□□ -1.19
CLIP3-203ENST00000586457 C1orf134Q5TEV5 83 aa7.6□□□□□ -1.19
CLIP3-203ENST00000586457 Q6ZNX1 250 aa7.6□□□□□ -1.19
CLIP3-203ENST00000586457 TRAV4A0A0B4J268 109 aa7.59□□□□□ -1.19
CLIP3-203ENST00000586457 B4DEV8 164 aa7.59□□□□□ -1.19
CLIP3-203ENST00000586457 SRIP30626 198 aa7.59□□□□□ -1.19
CLIP3-203ENST00000586457 ASIPP42127 132 aa7.59□□□□□ -1.19
CLIP3-203ENST00000586457 ZNF80P51504 273 aaPredicted RBP7.59□□□□□ -1.19
CLIP3-203ENST00000586457 FAM162BQ5T6X4 162 aa7.59□□□□□ -1.19
CLIP3-203ENST00000586457 SLC51BQ86UW2 128 aa7.59□□□□□ -1.19
CLIP3-203ENST00000586457 Q9H8V8 135 aa7.59□□□□□ -1.19
CLIP3-203ENST00000586457 LINC00588Q9Y4M8 146 aa7.59□□□□□ -1.19
CLIP3-203ENST00000586457 PLECQ15149 4684 aaKnown RBP7.58□□□□□ -1.2
CLIP3-203ENST00000586457 CIDEAO60543 219 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 IFNA1P01562 189 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 SFTA3P0C7M3 94 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 CRYBA4P53673 196 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 FHL2Q14192 279 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 ESRGQ1W209 222 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 NEGR1Q7Z3B1 354 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 Q86TA4 180 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 SYT8Q8NBV8 401 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 ZNF479Q96JC4 524 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 TXNDC17Q9BRA2 123 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 MANBALQ9NQG1 85 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 GNG13Q9P2W3 67 aa7.58□□□□□ -1.2
CLIP3-203ENST00000586457 RYR2Q92736 4967 aa7.57□□□□□ -1.2
CLIP3-203ENST00000586457 A0A096LPF7 62 aa7.57□□□□□ -1.2
CLIP3-203ENST00000586457 NBDYA0A0U1RRE5 68 aa7.57□□□□□ -1.2
CLIP3-203ENST00000586457 PRSS29PA6NIE9 313 aa7.57□□□□□ -1.2
CLIP3-203ENST00000586457 M0R036 132 aa7.57□□□□□ -1.2
CLIP3-203ENST00000586457 TTC32Q5I0X7 151 aa7.57□□□□□ -1.2
CLIP3-203ENST00000586457 NHLRC2Q8NBF2 726 aa7.57□□□□□ -1.2
CLIP3-203ENST00000586457 VSIG2Q96IQ7 327 aa7.57□□□□□ -1.2
CLIP3-203ENST00000586457 SACSQ9NZJ4 4579 aa7.57□□□□□ -1.2
CLIP3-203ENST00000586457 DNAH1Q9P2D7 4330 aa7.56□□□□□ -1.2
CLIP3-203ENST00000586457 TRAV9-2A0A087WT02 112 aa7.56□□□□□ -1.2
CLIP3-203ENST00000586457 GYPEP15421 78 aa7.56□□□□□ -1.2
CLIP3-203ENST00000586457 SH2D6Q7Z4S9 175 aa7.56□□□□□ -1.2
CLIP3-203ENST00000586457 BAGE2Q86Y30 109 aa7.56□□□□□ -1.2
CLIP3-203ENST00000586457 ZNRF2Q8NHG8 242 aa7.56□□□□□ -1.2
CLIP3-203ENST00000586457 ZC2HC1AQ96GY0 325 aa7.56□□□□□ -1.2
CLIP3-203ENST00000586457 PRADC1Q9BSG0 188 aa7.56□□□□□ -1.2
CLIP3-203ENST00000586457 MRPS16Q9Y3D3 137 aaKnown RBP7.56□□□□□ -1.2
CLIP3-203ENST00000586457 PHLDA3Q9Y5J5 127 aa7.56□□□□□ -1.2
CLIP3-203ENST00000586457 TMSB15BA0A087X1C1 80 aa7.55□□□□□ -1.2
CLIP3-203ENST00000586457 TRBV6-1A0A0K0K1D8 114 aa7.55□□□□□ -1.2
CLIP3-203ENST00000586457 A8MWV9 139 aa7.55□□□□□ -1.2
CLIP3-203ENST00000586457 SH2D1AO60880 128 aa7.55□□□□□ -1.2
CLIP3-203ENST00000586457 LTAP01374 205 aa7.55□□□□□ -1.2
CLIP3-203ENST00000586457 SULT1A2P50226 295 aa7.55□□□□□ -1.2
CLIP3-203ENST00000586457 DAZAP1Q96EP5 407 aaKnown RBP7.55□□□□□ -1.2
CLIP3-203ENST00000586457 C11orf21Q9P2W6 132 aa7.55□□□□□ -1.2
CLIP3-203ENST00000586457 IGHV3-73A0A0B4J1V6 119 aa7.54□□□□□ -1.2
CLIP3-203ENST00000586457 TRAV1-1A0A0B4J248 108 aa7.54□□□□□ -1.2
CLIP3-203ENST00000586457 IGKV3D-20A0A0C4DH25 116 aa7.54□□□□□ -1.2
CLIP3-203ENST00000586457 SCO2A0A1W2PP80 73 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms