RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 SPAG8Q99932 426 aaPredicted RBP7.77□□□□□ -1.17
LIG3-203ENST00000585370 OR4C46A6NHA9 309 aa7.76□□□□□ -1.17
LIG3-203ENST00000585370 ZNF688P0C7X2 276 aa7.76□□□□□ -1.17
LIG3-203ENST00000585370 GZMBP10144 247 aa7.76□□□□□ -1.17
LIG3-203ENST00000585370 TFPI2P48307 235 aa7.76□□□□□ -1.17
LIG3-203ENST00000585370 DMRTA1Q5VZB9 504 aa7.76□□□□□ -1.17
LIG3-203ENST00000585370 HIST2H2BDQ6DRA6 164 aa7.76□□□□□ -1.17
LIG3-203ENST00000585370 ZNF493Q6ZR52 646 aa7.76□□□□□ -1.17
LIG3-203ENST00000585370 HIST3H2BBQ8N257 126 aa7.76□□□□□ -1.17
LIG3-203ENST00000585370 OR2K2Q8NGT1 345 aa7.76□□□□□ -1.17
LIG3-203ENST00000585370 CNFNQ9BYD5 112 aa7.76□□□□□ -1.17
LIG3-203ENST00000585370 A0A1W2PRX2 142 aa7.75□□□□□ -1.17
LIG3-203ENST00000585370 KLLNB2CW77 178 aa7.75□□□□□ -1.17
LIG3-203ENST00000585370 ARMS2P0C7Q2 107 aa7.75□□□□□ -1.17
LIG3-203ENST00000585370 FRMD6-AS1P0C7T7 363 aa7.75□□□□□ -1.17
LIG3-203ENST00000585370 ZNF705DP0CH99 300 aaPredicted RBP7.75□□□□□ -1.17
LIG3-203ENST00000585370 ZNF705BP0CI00 300 aaPredicted RBP7.75□□□□□ -1.17
LIG3-203ENST00000585370 MED14OSP0DP75 135 aa7.75□□□□□ -1.17
LIG3-203ENST00000585370 PRB4P10163 310 aaPredicted RBP7.75□□□□□ -1.17
LIG3-203ENST00000585370 AKR1D1P51857 326 aa7.75□□□□□ -1.17
LIG3-203ENST00000585370 CACNG7P62955 275 aa7.75□□□□□ -1.17
LIG3-203ENST00000585370 DNLZQ5SXM8 178 aa7.75□□□□□ -1.17
LIG3-203ENST00000585370 KCNS1Q96KK3 526 aa7.75□□□□□ -1.17
LIG3-203ENST00000585370 DUX3Q96PT4 197 aa7.75□□□□□ -1.17
LIG3-203ENST00000585370 SSBP4Q9BWG4 385 aaPredicted RBP7.75□□□□□ -1.17
LIG3-203ENST00000585370 TMSB15BA0A087X1C1 80 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 IGKV3D-20A0A0C4DH25 116 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 A8MTW9 85 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 F6UB75 175 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 G3V4G9 280 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 OR5AL1P0C617 328 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 ESDP10768 282 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 RNASE4P34096 147 aaKnown RBP7.74□□□□□ -1.17
LIG3-203ENST00000585370 GDF5OSQ5U4N7 250 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 BAGE3Q86Y29 109 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 TMEM61Q8N0U2 210 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 C11orf44Q8N8P7 122 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 TMEM18Q96B42 140 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 PACRGQ96M98 296 aaPredicted RBP7.74□□□□□ -1.17
LIG3-203ENST00000585370 CLUHP3Q96NS8 147 aa7.74□□□□□ -1.17
LIG3-203ENST00000585370 IGHV4-4A0A075B6R2 117 aa7.73□□□□□ -1.17
LIG3-203ENST00000585370 LOC102724200A0A096LPH7 203 aaPredicted RBP7.73□□□□□ -1.17
LIG3-203ENST00000585370 SNAI2O43623 268 aa7.73□□□□□ -1.17
LIG3-203ENST00000585370 SRIP30626 198 aa7.73□□□□□ -1.17
LIG3-203ENST00000585370 CDKN1BP46527 198 aa7.73□□□□□ -1.17
LIG3-203ENST00000585370 SLAQ13239 276 aa7.73□□□□□ -1.17
LIG3-203ENST00000585370 BEAN1Q3B7T3 259 aa7.73□□□□□ -1.17
LIG3-203ENST00000585370 SMIM15Q7Z3B0 74 aa7.73□□□□□ -1.17
LIG3-203ENST00000585370 ZNF575Q86XF7 245 aa7.73□□□□□ -1.17
LIG3-203ENST00000585370 ALKBH7Q9BT30 221 aaPredicted RBP7.73□□□□□ -1.17
LIG3-203ENST00000585370 TPPP3Q9BW30 176 aa7.73□□□□□ -1.17
LIG3-203ENST00000585370 C7orf71A4D174 169 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 GRIFINA4D1Z8 144 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 ADARB2-AS1A8MUL3 147 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 HLA-DRB4P13762 266 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 NTF3P20783 257 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 ASIPP42127 132 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 DEFB131AP59861 70 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 TWIST1Q15672 202 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 NSUN5P1Q3KNT7 163 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 KIAA1644Q3SXP7 199 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 CD300EQ496F6 205 aaPredicted RBP7.72□□□□□ -1.17
LIG3-203ENST00000585370 KPRPQ5T749 579 aaPredicted RBP7.72□□□□□ -1.17
LIG3-203ENST00000585370 FAM159AQ6UWV7 190 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 FAM110AQ9BQ89 295 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 TMEM191AQ9H0A3 160 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 C11orf21Q9P2W6 132 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 HLA-DRB4X5D2U9 266 aa7.72□□□□□ -1.17
LIG3-203ENST00000585370 NBEAL2Q6ZNJ1 2754 aa7.71□□□□□ -1.17
LIG3-203ENST00000585370 H3BMM0 161 aa7.71□□□□□ -1.18
LIG3-203ENST00000585370 AMBPP02760 352 aa7.71□□□□□ -1.18
LIG3-203ENST00000585370 PPBPP02775 128 aa7.71□□□□□ -1.18
LIG3-203ENST00000585370 PRB2P02812 416 aaPredicted RBP7.71□□□□□ -1.18
LIG3-203ENST00000585370 S100A4P26447 101 aaKnown RBP7.71□□□□□ -1.18
LIG3-203ENST00000585370 DEFB1P60022 68 aa7.71□□□□□ -1.18
LIG3-203ENST00000585370 TDRG1Q3Y452 100 aa7.71□□□□□ -1.18
LIG3-203ENST00000585370 PRR9Q5T870 116 aa7.71□□□□□ -1.18
LIG3-203ENST00000585370 SAMD5Q5TGI4 173 aa7.71□□□□□ -1.18
LIG3-203ENST00000585370 FAM104BQ5XKR9 115 aa7.71□□□□□ -1.18
LIG3-203ENST00000585370 ZNF256Q9Y2P7 627 aaPredicted RBP7.71□□□□□ -1.18
LIG3-203ENST00000585370 SELENOKQ9Y6D0 94 aa7.71□□□□□ -1.18
LIG3-203ENST00000585370 KMT2CQ8NEZ4 4911 aaKnown RBP7.71□□□□□ -1.18
LIG3-203ENST00000585370 ZNF324O75467 553 aaPredicted RBP7.7□□□□□ -1.18
LIG3-203ENST00000585370 SMIM6P0DI80 62 aa7.7□□□□□ -1.18
LIG3-203ENST00000585370 FABP4P15090 132 aa7.7□□□□□ -1.18
LIG3-203ENST00000585370 CD33P20138 364 aa7.7□□□□□ -1.18
LIG3-203ENST00000585370 ANXA2RQ3ZCQ2 193 aa7.7□□□□□ -1.18
LIG3-203ENST00000585370 GFI1BQ5VTD9 330 aa7.7□□□□□ -1.18
LIG3-203ENST00000585370 AMTNQ6UX39 209 aa7.7□□□□□ -1.18
LIG3-203ENST00000585370 LINC00518Q8N0U6 118 aa7.7□□□□□ -1.18
LIG3-203ENST00000585370 C18orf32Q8TCD1 76 aa7.7□□□□□ -1.18
LIG3-203ENST00000585370 HIST1H2BLQ99880 126 aa7.7□□□□□ -1.18
LIG3-203ENST00000585370 C20orf144Q9BQM9 153 aa7.7□□□□□ -1.18
LIG3-203ENST00000585370 MAP6D1Q9H9H5 199 aa7.7□□□□□ -1.18
LIG3-203ENST00000585370 IFITM10A6NMD0 228 aa7.69□□□□□ -1.18
LIG3-203ENST00000585370 J3KRW8 73 aa7.69□□□□□ -1.18
LIG3-203ENST00000585370 SAP30O75446 220 aa7.69□□□□□ -1.18
LIG3-203ENST00000585370 IGLV1-51P01701 117 aa7.69□□□□□ -1.18
LIG3-203ENST00000585370 PF4P02776 101 aa7.69□□□□□ -1.18
LIG3-203ENST00000585370 INSL3P51460 131 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms