RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 IGKV2-40A0A087WW87 121 aaPredicted RBP11.29□□□□□ -0.6
CCDC57-219ENST00000584717 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
CCDC57-219ENST00000584717 IGKV2D-40P01614 121 aaPredicted RBP11.29□□□□□ -0.6
CCDC57-219ENST00000584717 GPX1P07203 203 aa11.29□□□□□ -0.6
CCDC57-219ENST00000584717 NMBP08949 121 aa11.29□□□□□ -0.6
CCDC57-219ENST00000584717 Q5VSD8 79 aa11.29□□□□□ -0.6
CCDC57-219ENST00000584717 CDPF1Q6NVV7 123 aa11.29□□□□□ -0.6
CCDC57-219ENST00000584717 SFT2D1Q8WV19 159 aa11.29□□□□□ -0.6
CCDC57-219ENST00000584717 BLNKQ8WV28 456 aa11.29□□□□□ -0.6
CCDC57-219ENST00000584717 C8orf49Q96NF6 230 aa11.29□□□□□ -0.6
CCDC57-219ENST00000584717 TMEM14CQ9P0S9 112 aa11.29□□□□□ -0.6
CCDC57-219ENST00000584717 PRO0255Q9UI72 69 aa11.29□□□□□ -0.6
CCDC57-219ENST00000584717 PRELID1Q9Y255 219 aa11.29□□□□□ -0.6
CCDC57-219ENST00000584717 SRRM2Q9UQ35 2752 aaKnown RBP11.29□□□□□ -0.6
CCDC57-219ENST00000584717 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
CCDC57-219ENST00000584717 CRISP2P16562 243 aa11.28□□□□□ -0.6
CCDC57-219ENST00000584717 FHITP49789 147 aa11.28□□□□□ -0.6
CCDC57-219ENST00000584717 CRYBA4P53673 196 aa11.28□□□□□ -0.6
CCDC57-219ENST00000584717 KRTAP10-1P60331 282 aa11.28□□□□□ -0.6
CCDC57-219ENST00000584717 IBA57Q5T440 356 aaKnown RBP11.28□□□□□ -0.6
CCDC57-219ENST00000584717 LYPD5Q6UWN5 251 aa11.28□□□□□ -0.6
CCDC57-219ENST00000584717 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
CCDC57-219ENST00000584717 A0A087WTM6 91 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 MAP1LC3B2A6NCE7 125 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 CXorf1O96002 111 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 PDE6HQ13956 83 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 ICAM4Q14773 271 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 KHDC3LQ587J8 217 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 PQLC2Q6ZP29 291 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 C9orf47Q6ZRZ4 202 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 NFE4Q86UQ8 179 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 FRZBQ92765 325 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 VGLL1Q99990 258 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 MAP1LC3BQ9GZQ8 125 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 HHLA3Q9XRX5 114 aa11.27□□□□□ -0.61
CCDC57-219ENST00000584717 IGHV1OR15-1A0A075B7D0 117 aa11.26□□□□□ -0.61
CCDC57-219ENST00000584717 STAG3L2P0CL84 134 aa11.26□□□□□ -0.61
CCDC57-219ENST00000584717 STAG3L3P0CL85 134 aa11.26□□□□□ -0.61
CCDC57-219ENST00000584717 PPT1P50897 306 aa11.26□□□□□ -0.61
CCDC57-219ENST00000584717 FHL2Q14192 279 aa11.26□□□□□ -0.61
CCDC57-219ENST00000584717 ZNF726P1Q15940 193 aa11.26□□□□□ -0.61
CCDC57-219ENST00000584717 MRPL23Q16540 153 aaKnown RBP11.26□□□□□ -0.61
CCDC57-219ENST00000584717 MIR17HGQ75NE6 70 aa11.26□□□□□ -0.61
CCDC57-219ENST00000584717 LYPD6BQ8NI32 183 aa11.26□□□□□ -0.61
CCDC57-219ENST00000584717 AAMDCQ9H7C9 122 aa11.26□□□□□ -0.61
CCDC57-219ENST00000584717 LY96Q9Y6Y9 160 aa11.26□□□□□ -0.61
CCDC57-219ENST00000584717 SLAQ13239 276 aa11.25□□□□□ -0.61
CCDC57-219ENST00000584717 NEGR1Q7Z3B1 354 aa11.25□□□□□ -0.61
CCDC57-219ENST00000584717 WFDC10BQ8IUB3 73 aa11.25□□□□□ -0.61
CCDC57-219ENST00000584717 SLC25A2Q9BXI2 301 aa11.25□□□□□ -0.61
CCDC57-219ENST00000584717 FLG2Q5D862 2391 aaPredicted RBP11.25□□□□□ -0.61
CCDC57-219ENST00000584717 TRAV9-2A0A087WT02 112 aa11.24□□□□□ -0.61
CCDC57-219ENST00000584717 SMR3BP02814 79 aaPredicted RBP11.24□□□□□ -0.61
CCDC57-219ENST00000584717 SFTA3P0C7M3 94 aa11.24□□□□□ -0.61
CCDC57-219ENST00000584717 ZNF415Q09FC8 603 aa11.24□□□□□ -0.61
CCDC57-219ENST00000584717 NDUFA5Q16718 116 aa11.24□□□□□ -0.61
CCDC57-219ENST00000584717 Q8TAT8 98 aa11.24□□□□□ -0.61
CCDC57-219ENST00000584717 PCNPQ8WW12 178 aaKnown RBP11.24□□□□□ -0.61
CCDC57-219ENST00000584717 PAXXQ9BUH6 204 aa11.24□□□□□ -0.61
CCDC57-219ENST00000584717 OR51M1Q9H341 326 aa11.24□□□□□ -0.61
CCDC57-219ENST00000584717 TMEM167BQ9NRX6 74 aa11.24□□□□□ -0.61
CCDC57-219ENST00000584717 MED9Q9NWA0 146 aa11.24□□□□□ -0.61
CCDC57-219ENST00000584717 TRGV4A0A0C4DH28 118 aa11.23□□□□□ -0.61
CCDC57-219ENST00000584717 HMGB3O15347 200 aaKnown RBP11.23□□□□□ -0.61
CCDC57-219ENST00000584717 OR7C2O60412 319 aa11.23□□□□□ -0.61
CCDC57-219ENST00000584717 IFNA1P01562 189 aa11.23□□□□□ -0.61
CCDC57-219ENST00000584717 MUC21Q5SSG8 566 aa11.23□□□□□ -0.61
CCDC57-219ENST00000584717 FAM167A-AS1Q96KT0 104 aa11.23□□□□□ -0.61
CCDC57-219ENST00000584717 MSRB1Q9NZV6 116 aa11.23□□□□□ -0.61
CCDC57-219ENST00000584717 ZNF492Q9P255 531 aa11.23□□□□□ -0.61
CCDC57-219ENST00000584717 LINC00862A6NCI5 91 aa11.22□□□□□ -0.61
CCDC57-219ENST00000584717 K7EQD1 137 aa11.22□□□□□ -0.61
CCDC57-219ENST00000584717 ARL14EPLP0DKL9 152 aa11.22□□□□□ -0.61
CCDC57-219ENST00000584717 GCHFRP30047 84 aa11.22□□□□□ -0.61
CCDC57-219ENST00000584717 SRIP30626 198 aa11.22□□□□□ -0.61
CCDC57-219ENST00000584717 TAGLN2P37802 199 aaKnown RBP11.22□□□□□ -0.61
CCDC57-219ENST00000584717 ZNF138P52744 262 aa11.22□□□□□ -0.61
CCDC57-219ENST00000584717 FGF8P55075 233 aaPredicted RBP11.22□□□□□ -0.61
CCDC57-219ENST00000584717 HAMPP81172 84 aa11.22□□□□□ -0.61
CCDC57-219ENST00000584717 IQCF2Q8IXL9 164 aa11.22□□□□□ -0.61
CCDC57-219ENST00000584717 ZNF479Q96JC4 524 aa11.22□□□□□ -0.61
CCDC57-219ENST00000584717 A0A1B0GV50 99 aa11.21□□□□□ -0.61
CCDC57-219ENST00000584717 OR10J4P0C629 311 aa11.21□□□□□ -0.61
CCDC57-219ENST00000584717 NBEAP1P0C6P0 100 aa11.21□□□□□ -0.61
CCDC57-219ENST00000584717 GYPEP15421 78 aa11.21□□□□□ -0.61
CCDC57-219ENST00000584717 EVI2AP22794 236 aa11.21□□□□□ -0.61
CCDC57-219ENST00000584717 MDFICQ9P1T7 246 aa11.21□□□□□ -0.61
CCDC57-219ENST00000584717 RAB19A4D1S5 217 aa11.2□□□□□ -0.62
CCDC57-219ENST00000584717 GCSHP23434 173 aa11.2□□□□□ -0.62
CCDC57-219ENST00000584717 CCL20P78556 96 aa11.2□□□□□ -0.62
CCDC57-219ENST00000584717 SUN5Q8TC36 379 aa11.2□□□□□ -0.62
CCDC57-219ENST00000584717 MANBALQ9NQG1 85 aa11.2□□□□□ -0.62
CCDC57-219ENST00000584717 RBFOX3A6NFN3 312 aa11.19□□□□□ -0.62
CCDC57-219ENST00000584717 EIF3GO75821 320 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCDC57-219ENST00000584717 UBE2L3P68036 154 aaKnown RBP11.19□□□□□ -0.62
CCDC57-219ENST00000584717 FXYD5Q96DB9 178 aa11.19□□□□□ -0.62
CCDC57-219ENST00000584717 TXNDC17Q9BRA2 123 aa11.19□□□□□ -0.62
CCDC57-219ENST00000584717 NKX6-2Q9C056 277 aaPredicted RBP11.19□□□□□ -0.62
CCDC57-219ENST00000584717 ARL2-SNX15V9GYD0 113 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms