RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 ATP5LO75964 103 aa9.9□□□□□ -0.82
ITGB4-212ENST00000584558 TGFAP01135 160 aa9.9□□□□□ -0.82
ITGB4-212ENST00000584558 TMEM133Q9H2Q1 129 aa9.9□□□□□ -0.82
ITGB4-212ENST00000584558 MED13LQ71F56 2210 aa9.9□□□□□ -0.82
ITGB4-212ENST00000584558 CCDC168Q8NDH2 2452 aa9.9□□□□□ -0.82
ITGB4-212ENST00000584558 TRBV20-1A0A075B6N2 111 aa9.9□□□□□ -0.82
ITGB4-212ENST00000584558 GATA1P15976 413 aaPredicted RBP9.9□□□□□ -0.82
ITGB4-212ENST00000584558 DIAPH2-AS1Q14236 149 aa9.9□□□□□ -0.82
ITGB4-212ENST00000584558 IGHV1-8P0DP01 117 aa9.89□□□□□ -0.83
ITGB4-212ENST00000584558 OR4C13Q8NGP0 309 aa9.89□□□□□ -0.83
ITGB4-212ENST00000584558 ITLN2Q8WWU7 325 aaPredicted RBP9.89□□□□□ -0.83
ITGB4-212ENST00000584558 SETXQ7Z333 2677 aaKnown RBP9.89□□□□□ -0.83
ITGB4-212ENST00000584558 TRBV19A0A075B6N1 114 aa9.89□□□□□ -0.83
ITGB4-212ENST00000584558 TRBV6-1A0A0K0K1D8 114 aa9.89□□□□□ -0.83
ITGB4-212ENST00000584558 A0A1W2PPR1 153 aa9.89□□□□□ -0.83
ITGB4-212ENST00000584558 HLA-DRB4P13762 266 aa9.89□□□□□ -0.83
ITGB4-212ENST00000584558 RPL32P62910 135 aaKnown RBP9.89□□□□□ -0.83
ITGB4-212ENST00000584558 TEN1Q86WV5 123 aa9.89□□□□□ -0.83
ITGB4-212ENST00000584558 FAM110AQ9BQ89 295 aa9.89□□□□□ -0.83
ITGB4-212ENST00000584558 HLA-DRB4X5D2U9 266 aa9.89□□□□□ -0.83
ITGB4-212ENST00000584558 TNFRSF6BO95407 300 aa9.89□□□□□ -0.83
ITGB4-212ENST00000584558 NHLRC4P0CG21 123 aaPredicted RBP9.89□□□□□ -0.83
ITGB4-212ENST00000584558 CRYGCP07315 174 aa9.88□□□□□ -0.83
ITGB4-212ENST00000584558 SIGLEC15Q6ZMC9 328 aa9.88□□□□□ -0.83
ITGB4-212ENST00000584558 DTX2Q86UW9 622 aa9.88□□□□□ -0.83
ITGB4-212ENST00000584558 CELSR1Q9NYQ6 3014 aa9.88□□□□□ -0.83
ITGB4-212ENST00000584558 ZNF688P0C7X2 276 aa9.88□□□□□ -0.83
ITGB4-212ENST00000584558 NXT2Q9NPJ8 142 aaKnown RBP9.88□□□□□ -0.83
ITGB4-212ENST00000584558 TMEM14CQ9P0S9 112 aa9.88□□□□□ -0.83
ITGB4-212ENST00000584558 CCDC179H3BU77 68 aa9.87□□□□□ -0.83
ITGB4-212ENST00000584558 RAB1BQ9H0U4 201 aa9.87□□□□□ -0.83
ITGB4-212ENST00000584558 APCP25054 2843 aa9.87□□□□□ -0.83
ITGB4-212ENST00000584558 ENSAO43768 121 aaKnown RBP9.87□□□□□ -0.83
ITGB4-212ENST00000584558 LY6HO94772 140 aa9.87□□□□□ -0.83
ITGB4-212ENST00000584558 MYOZ3Q8TDC0 251 aa9.87□□□□□ -0.83
ITGB4-212ENST00000584558 RNF185Q96GF1 192 aa9.87□□□□□ -0.83
ITGB4-212ENST00000584558 IGHV3-72A0A0B4J1Y9 119 aa9.86□□□□□ -0.83
ITGB4-212ENST00000584558 EGR2P11161 476 aaPredicted RBP9.86□□□□□ -0.83
ITGB4-212ENST00000584558 RASL11BQ9BPW5 248 aa9.86□□□□□ -0.83
ITGB4-212ENST00000584558 MYMXA0A1B0GTQ4 84 aa9.86□□□□□ -0.83
ITGB4-212ENST00000584558 LY6G5BQ8NDX9 201 aa9.86□□□□□ -0.83
ITGB4-212ENST00000584558 GAGE12JA6NER3 117 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 GAGE7O76087 117 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 IGLV1-47P01700 117 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 IGLV2-23P01705 113 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 GAGE12FP0CL80 117 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 GAGE12GP0CL81 117 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 GAGE12IP0CL82 117 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 GAGE4Q13068 117 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 VMA21Q3ZAQ7 101 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 C19orf84I3L1E1 186 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 PRTN3P24158 256 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 EFNA4P52798 201 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 ANKRD29Q8N6D5 301 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 Q8TAT8 98 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 FBXL15Q9H469 300 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 ZANQ9Y493 2812 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 IGKV2-40A0A087WW87 121 aaPredicted RBP9.85□□□□□ -0.83
ITGB4-212ENST00000584558 A8MWV9 139 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 IGKV2D-40P01614 121 aaPredicted RBP9.85□□□□□ -0.83
ITGB4-212ENST00000584558 GAGE2BQ13066 116 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 GAGE2EQ4V326 116 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 AJUBAQ96IF1 538 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 GAGE2DQ9UEU5 116 aa9.85□□□□□ -0.83
ITGB4-212ENST00000584558 A0A087WX48 190 aa9.84□□□□□ -0.83
ITGB4-212ENST00000584558 ORM1P02763 201 aa9.84□□□□□ -0.83
ITGB4-212ENST00000584558 CLEC3BP05452 202 aa9.84□□□□□ -0.83
ITGB4-212ENST00000584558 DLX1P56177 255 aa9.84□□□□□ -0.83
ITGB4-212ENST00000584558 NDUFV3P56181 108 aaKnown RBP9.84□□□□□ -0.83
ITGB4-212ENST00000584558 SRSF9Q13242 221 aaKnown RBP eCLIP9.84□□□□□ -0.83
ITGB4-212ENST00000584558 SCGB1D4Q6XE38 83 aa9.84□□□□□ -0.83
ITGB4-212ENST00000584558 VCX2Q9H322 139 aa9.84□□□□□ -0.83
ITGB4-212ENST00000584558 UNC79Q9P2D8 2635 aa9.84□□□□□ -0.83
ITGB4-212ENST00000584558 TCL1BO95988 128 aa9.84□□□□□ -0.83
ITGB4-212ENST00000584558 RPL27AP46776 148 aaKnown RBP9.84□□□□□ -0.83
ITGB4-212ENST00000584558 TTC32Q5I0X7 151 aa9.84□□□□□ -0.83
ITGB4-212ENST00000584558 CITED1Q99966 193 aa9.84□□□□□ -0.83
ITGB4-212ENST00000584558 AAMDCQ9H7C9 122 aa9.84□□□□□ -0.83
ITGB4-212ENST00000584558 SNCGO76070 127 aa9.83□□□□□ -0.84
ITGB4-212ENST00000584558 BRI3O95415 125 aa9.83□□□□□ -0.84
ITGB4-212ENST00000584558 LGALS1P09382 135 aaKnown RBP9.83□□□□□ -0.84
ITGB4-212ENST00000584558 PLNP26678 52 aa9.83□□□□□ -0.84
ITGB4-212ENST00000584558 MRGPRG-AS1Q2M3A8 158 aa9.83□□□□□ -0.84
ITGB4-212ENST00000584558 HIST2H2BCQ6DN03 193 aa9.83□□□□□ -0.84
ITGB4-212ENST00000584558 FABP5P3A8MUU1 101 aa9.83□□□□□ -0.84
ITGB4-212ENST00000584558 TMEM262E9PQX1 116 aa9.83□□□□□ -0.84
ITGB4-212ENST00000584558 LINC01559Q495D7 138 aa9.83□□□□□ -0.84
ITGB4-212ENST00000584558 TMEM78Q5T7P6 136 aa9.83□□□□□ -0.84
ITGB4-212ENST00000584558 TRAV8-2A0A0B4J237 113 aa9.82□□□□□ -0.84
ITGB4-212ENST00000584558 TRAV4A0A0B4J268 109 aa9.82□□□□□ -0.84
ITGB4-212ENST00000584558 RHODO00212 210 aa9.82□□□□□ -0.84
ITGB4-212ENST00000584558 ZNF80P51504 273 aaPredicted RBP9.82□□□□□ -0.84
ITGB4-212ENST00000584558 Q8N8P6 123 aa9.82□□□□□ -0.84
ITGB4-212ENST00000584558 SHANK2-AS3Q9BTD1 123 aa9.82□□□□□ -0.84
ITGB4-212ENST00000584558 KLK15Q9H2R5 256 aa9.82□□□□□ -0.84
ITGB4-212ENST00000584558 NAV2Q8IVL1 2488 aa9.82□□□□□ -0.84
ITGB4-212ENST00000584558 LINC01546A6NGU7 62 aa9.82□□□□□ -0.84
ITGB4-212ENST00000584558 PLGLAQ15195 96 aa9.82□□□□□ -0.84
ITGB4-212ENST00000584558 LY6LH3BQJ8 138 aa9.81□□□□□ -0.84
ITGB4-212ENST00000584558 IGLC6P0CF74 106 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms