RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 IBA57Q5T440 356 aaKnown RBP13.26□□□□□ -0.29
RFFL-211ENST00000584541 TRGV11A0A075B6L2 103 aa13.25□□□□□ -0.29
RFFL-211ENST00000584541 TMEM189A5PLL7 270 aa13.25□□□□□ -0.29
RFFL-211ENST00000584541 C19orf71A6NCJ1 209 aa13.25□□□□□ -0.29
RFFL-211ENST00000584541 KRBOX1C9JBD0 128 aa13.25□□□□□ -0.29
RFFL-211ENST00000584541 M0R036 132 aa13.25□□□□□ -0.29
RFFL-211ENST00000584541 ADCYAP1P18509 176 aa13.25□□□□□ -0.29
RFFL-211ENST00000584541 ERVFC1-1P60608 527 aa13.25□□□□□ -0.29
RFFL-211ENST00000584541 TDRG1Q3Y452 100 aa13.25□□□□□ -0.29
RFFL-211ENST00000584541 LINC01559Q495D7 138 aa13.25□□□□□ -0.29
RFFL-211ENST00000584541 ISOC2Q96AB3 205 aa13.25□□□□□ -0.29
RFFL-211ENST00000584541 X6R8D5 127 aa13.25□□□□□ -0.29
RFFL-211ENST00000584541 MEGF8Q7Z7M0 2845 aa13.24□□□□□ -0.29
RFFL-211ENST00000584541 ZNF493Q6ZR52 646 aa13.24□□□□□ -0.29
RFFL-211ENST00000584541 FAM231DQ6ZW35 169 aa13.24□□□□□ -0.29
RFFL-211ENST00000584541 C15orf54Q8N8G6 183 aa13.24□□□□□ -0.29
RFFL-211ENST00000584541 NUDT10Q8NFP7 164 aa13.24□□□□□ -0.29
RFFL-211ENST00000584541 NUDT11Q96G61 164 aa13.24□□□□□ -0.29
RFFL-211ENST00000584541 C16orf74Q96GX8 76 aa13.24□□□□□ -0.29
RFFL-211ENST00000584541 RNASE7Q9H1E1 156 aaKnown RBP13.24□□□□□ -0.29
RFFL-211ENST00000584541 C11orf21Q9P2W6 132 aa13.24□□□□□ -0.29
RFFL-211ENST00000584541 IGKV3D-20A0A0C4DH25 116 aa13.23□□□□□ -0.29
RFFL-211ENST00000584541 XKRY2A2RUG3 117 aa13.23□□□□□ -0.29
RFFL-211ENST00000584541 GATCO43716 136 aaKnown RBP13.23□□□□□ -0.29
RFFL-211ENST00000584541 RPS20P60866 119 aaKnown RBP13.23□□□□□ -0.29
RFFL-211ENST00000584541 OR2D3Q8NGH3 330 aa13.23□□□□□ -0.29
RFFL-211ENST00000584541 TMEM263Q8WUH6 116 aaKnown RBP13.23□□□□□ -0.29
RFFL-211ENST00000584541 TMSB15BA0A087X1C1 80 aa13.22□□□□□ -0.29
RFFL-211ENST00000584541 TYMSP04818 313 aa13.22□□□□□ -0.29
RFFL-211ENST00000584541 ZNF415Q09FC8 603 aa13.22□□□□□ -0.29
RFFL-211ENST00000584541 C10orf91Q5T1B1 145 aa13.22□□□□□ -0.29
RFFL-211ENST00000584541 SFRP2Q96HF1 295 aa13.22□□□□□ -0.29
RFFL-211ENST00000584541 RPP21Q9H633 154 aaKnown RBP13.22□□□□□ -0.29
RFFL-211ENST00000584541 OSTCQ9NRP0 149 aa13.22□□□□□ -0.29
RFFL-211ENST00000584541 TP53TG3Q9ULZ0 132 aa13.22□□□□□ -0.29
RFFL-211ENST00000584541 CARHSP1Q9Y2V2 147 aaKnown RBP13.22□□□□□ -0.29
RFFL-211ENST00000584541 GNRH2O43555 120 aa13.21□□□□□ -0.29
RFFL-211ENST00000584541 PRM2P04554 102 aa13.21□□□□□ -0.29
RFFL-211ENST00000584541 AZU1P20160 251 aa13.21□□□□□ -0.29
RFFL-211ENST00000584541 S100A4P26447 101 aaKnown RBP13.21□□□□□ -0.29
RFFL-211ENST00000584541 ASIPP42127 132 aa13.21□□□□□ -0.29
RFFL-211ENST00000584541 RPL19P84098 196 aaKnown RBP13.21□□□□□ -0.29
RFFL-211ENST00000584541 OR10G8Q8NGN5 311 aa13.21□□□□□ -0.29
RFFL-211ENST00000584541 IGHV4-28A0A0C4DH34 117 aa13.2□□□□□ -0.3
RFFL-211ENST00000584541 SNURFLB1AK76 121 aa13.2□□□□□ -0.3
RFFL-211ENST00000584541 Q8NAQ8 132 aa13.2□□□□□ -0.3
RFFL-211ENST00000584541 RNASE8Q8TDE3 154 aaKnown RBP13.2□□□□□ -0.3
RFFL-211ENST00000584541 IGHV3-16A0A0C4DH30 117 aa13.19□□□□□ -0.3
RFFL-211ENST00000584541 GRIFINA4D1Z8 144 aa13.19□□□□□ -0.3
RFFL-211ENST00000584541 PPP1R2P9O14990 202 aa13.19□□□□□ -0.3
RFFL-211ENST00000584541 CXCL1P09341 107 aa13.19□□□□□ -0.3
RFFL-211ENST00000584541 A8MWL6 223 aa13.18□□□□□ -0.3
RFFL-211ENST00000584541 APOC3P02656 99 aa13.18□□□□□ -0.3
RFFL-211ENST00000584541 MT-ND4LP03901 98 aa13.18□□□□□ -0.3
RFFL-211ENST00000584541 EMP1P54849 157 aa13.18□□□□□ -0.3
RFFL-211ENST00000584541 CT83Q5H943 113 aa13.18□□□□□ -0.3
RFFL-211ENST00000584541 DNLZQ5SXM8 178 aa13.18□□□□□ -0.3
RFFL-211ENST00000584541 GSN-AS1Q9NRJ2 163 aa13.18□□□□□ -0.3
RFFL-211ENST00000584541 MDFICQ9P1T7 246 aa13.18□□□□□ -0.3
RFFL-211ENST00000584541 TCL1AP56279 114 aa13.17□□□□□ -0.3
RFFL-211ENST00000584541 SVBPQ8N300 66 aa13.17□□□□□ -0.3
RFFL-211ENST00000584541 C11orf72Q8NBR9 251 aa13.17□□□□□ -0.3
RFFL-211ENST00000584541 ANAPC16Q96DE5 110 aa13.17□□□□□ -0.3
RFFL-211ENST00000584541 C11orf68Q9H3H3 251 aaKnown RBP13.17□□□□□ -0.3
RFFL-211ENST00000584541 TIMM8BQ9Y5J9 83 aaPredicted RBP13.17□□□□□ -0.3
RFFL-211ENST00000584541 DEFB4AO15263 64 aa13.16□□□□□ -0.3
RFFL-211ENST00000584541 SPXQ9BT56 116 aa13.16□□□□□ -0.3
RFFL-211ENST00000584541 IL36BQ9NZH7 164 aa13.16□□□□□ -0.3
RFFL-211ENST00000584541 V9GYV3 84 aa13.16□□□□□ -0.3
RFFL-211ENST00000584541 H3BVH4 76 aa13.15□□□□□ -0.3
RFFL-211ENST00000584541 SNAPINO95295 136 aa13.15□□□□□ -0.3
RFFL-211ENST00000584541 MED14OSP0DP75 135 aa13.15□□□□□ -0.3
RFFL-211ENST00000584541 RNF212Q495C1 297 aa13.15□□□□□ -0.3
RFFL-211ENST00000584541 U3KQK5 164 aa13.15□□□□□ -0.3
RFFL-211ENST00000584541 PRKDCP78527 4128 aaKnown RBP13.15□□□□□ -0.3
RFFL-211ENST00000584541 A0A0J9YWU9 116 aa13.14□□□□□ -0.31
RFFL-211ENST00000584541 TEX48A0A1B0GUV7 120 aa13.14□□□□□ -0.31
RFFL-211ENST00000584541 A0A1W2PPQ1 181 aa13.14□□□□□ -0.31
RFFL-211ENST00000584541 PLAC8L1A1L4L8 177 aa13.14□□□□□ -0.31
RFFL-211ENST00000584541 ARMS2P0C7Q2 107 aa13.14□□□□□ -0.31
RFFL-211ENST00000584541 GZMBP10144 247 aa13.14□□□□□ -0.31
RFFL-211ENST00000584541 RNASE3P12724 160 aaKnown RBP13.14□□□□□ -0.31
RFFL-211ENST00000584541 DAZ2Q13117 558 aaKnown RBP13.14□□□□□ -0.31
RFFL-211ENST00000584541 FER1L6-AS1Q8NA97 138 aa13.14□□□□□ -0.31
RFFL-211ENST00000584541 CLRN3Q8NCR9 226 aa13.14□□□□□ -0.31
RFFL-211ENST00000584541 TSKUQ8WUA8 353 aa13.14□□□□□ -0.31
RFFL-211ENST00000584541 C9orf85Q96MD7 179 aa13.14□□□□□ -0.31
RFFL-211ENST00000584541 NOP10Q9NPE3 64 aaKnown RBP13.14□□□□□ -0.31
RFFL-211ENST00000584541 LYRM9A8MSI8 78 aa13.13□□□□□ -0.31
RFFL-211ENST00000584541 RHEBQ15382 184 aa13.13□□□□□ -0.31
RFFL-211ENST00000584541 IL17DQ8TAD2 202 aa13.13□□□□□ -0.31
RFFL-211ENST00000584541 TPPP3Q9BW30 176 aa13.13□□□□□ -0.31
RFFL-211ENST00000584541 GFRA4Q9GZZ7 299 aa13.13□□□□□ -0.31
RFFL-211ENST00000584541 PHLDA3Q9Y5J5 127 aa13.13□□□□□ -0.31
RFFL-211ENST00000584541 FAM231BA6NCW3 169 aa13.12□□□□□ -0.31
RFFL-211ENST00000584541 M0R2P5 195 aa13.12□□□□□ -0.31
RFFL-211ENST00000584541 OR5AL1P0C617 328 aa13.12□□□□□ -0.31
RFFL-211ENST00000584541 SPART-AS1P0CW21 52 aa13.12□□□□□ -0.31
RFFL-211ENST00000584541 FAM222AQ5U5X8 452 aa13.12□□□□□ -0.31
RFFL-211ENST00000584541 ZNF575Q86XF7 245 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms