RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, human

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-223	ENST00000584328	VSTM2A	Q8TAG5	236 aa		3.89	□□□□□ -1.79
NF1-223	ENST00000584328	GATAD1	Q8WUU5	269 aa		3.89	□□□□□ -1.79
NF1-223	ENST00000584328	ALKBH7	Q9BT30	221 aa	Predicted RBP	3.89	□□□□□ -1.79
NF1-223	ENST00000584328	GGTLC1	Q9BX51	225 aa		3.89	□□□□□ -1.79
NF1-223	ENST00000584328	ZNF430	Q9H8G1	570 aa	Predicted RBP	3.89	□□□□□ -1.79
NF1-223	ENST00000584328	GNB4	Q9HAV0	340 aa		3.89	□□□□□ -1.79
NF1-223	ENST00000584328	ENY2	Q9NPA8	101 aa		3.89	□□□□□ -1.79
NF1-223	ENST00000584328	TMEM14B	Q9NUH8	114 aa		3.89	□□□□□ -1.79
NF1-223	ENST00000584328	TECR	Q9NZ01	308 aa	Known RBP	3.89	□□□□□ -1.79
NF1-223	ENST00000584328		V9GYV3	84 aa		3.89	□□□□□ -1.79
NF1-223	ENST00000584328	GRIFIN	A4D1Z8	144 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	NCBP2L	A6PVI3	153 aa	Known RBP	3.88	□□□□□ -1.79
NF1-223	ENST00000584328	KRTAP9-6	A8MVA2	160 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	HSBP1L1	C9JCN9	74 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	INS-IGF2	F8WCM5	200 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328		K7ERU9	68 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	UPK2	O00526	184 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	OR2J3	O76001	311 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	APCS	P02743	223 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	CRYGC	P07315	174 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	OR9G9	P0C7N8	305 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	C3orf79	P0CE67	100 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	PSMB8	P28062	276 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	VDAC2	P45880	294 aa	Predicted RBP	3.88	□□□□□ -1.79
NF1-223	ENST00000584328	RBX1	P62877	108 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	RHOG	P84095	191 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	VMA21	Q3ZAQ7	101 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	PVRIG	Q6DKI7	326 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	TMEM136	Q6ZRR5	245 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328		Q8N976	141 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	RASL11B	Q9BPW5	248 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	MRPL32	Q9BYC8	188 aa	Known RBP	3.88	□□□□□ -1.79
NF1-223	ENST00000584328	MS4A6A	Q9H2W1	248 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	TP53TG3	Q9ULZ0	132 aa		3.88	□□□□□ -1.79
NF1-223	ENST00000584328	FOXA2	Q9Y261	457 aa	Predicted RBP	3.88	□□□□□ -1.79
NF1-223	ENST00000584328	PKD1L1	Q8TDX9	2849 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	TRBV20OR9-2	A0A075B6H5	130 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	TRAV3	A0A0B4J244	114 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	IGLC7	A0M8Q6	106 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	C15orf61	A6NNL5	157 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328		G3V318	75 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328		H3BUA1	57 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	CCL25	O15444	150 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	CRX	O43186	299 aa	Predicted RBP	3.87	□□□□□ -1.79
NF1-223	ENST00000584328	HSBP1	O75506	76 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	HIST1H1E	P10412	219 aa	Known RBP	3.87	□□□□□ -1.79
NF1-223	ENST00000584328	UBE2G1	P62253	170 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	RPL8	P62917	257 aa	Known RBP	3.87	□□□□□ -1.79
NF1-223	ENST00000584328	FXYD3	Q14802	87 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	MAJIN	Q3KP22	176 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	C10orf55	Q5SWW7	151 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	MRPL54	Q6P161	138 aa	Known RBP	3.87	□□□□□ -1.79
NF1-223	ENST00000584328	OR8I2	Q8N0Y5	310 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	TTC9C	Q8N5M4	171 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	TSKU	Q8WUA8	353 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	SRSF12	Q8WXF0	261 aa	Known RBP	3.87	□□□□□ -1.79
NF1-223	ENST00000584328	ARPC1A	Q92747	370 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	CHCHD1	Q96BP2	118 aa	Known RBP	3.87	□□□□□ -1.79
NF1-223	ENST00000584328	MGST2	Q99735	147 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	FAM103A1	Q9BTL3	118 aa	Known RBP	3.87	□□□□□ -1.79
NF1-223	ENST00000584328	TMEM191A	Q9H0A3	160 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	PLEKHA3	Q9HB20	300 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	NDUFA4L2	Q9NRX3	87 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	ZNF257	Q9Y2Q1	563 aa		3.87	□□□□□ -1.79
NF1-223	ENST00000584328	TRAV41	A0A0B4J266	112 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	TEX50	A0A1B0GTY4	177 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	PSMB11	A5LHX3	300 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	FAM231B	A6NCW3	169 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	PRSS46	E5RG02	174 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328		K7EN84	100 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	SLC17A3	O00476	420 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	C8orf88	P0DMB2	117 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	CD28	P10747	220 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	SRI	P30626	198 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	HSPE1	P61604	102 aa	Known RBP	3.86	□□□□□ -1.79
NF1-223	ENST00000584328	WT1-AS	Q06250	92 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	VAMP3	Q15836	100 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	TDRG1	Q3Y452	100 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	CENPW	Q5EE01	88 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	IBA57	Q5T440	356 aa	Known RBP	3.86	□□□□□ -1.79
NF1-223	ENST00000584328	MIC13	Q5XKP0	118 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	SLC25A34	Q6PIV7	304 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	NIT1	Q86X76	327 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	STXBP6	Q8NFX7	210 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	CACNG8	Q8WXS5	425 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	SPX	Q9BT56	116 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	TMEM70	Q9BUB7	260 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	DERL1	Q9BUN8	251 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	LINC00527	Q9UJ94	153 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	PRND	Q9UKY0	176 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	YTHDF2	Q9Y5A9	579 aa	Known RBP	3.86	□□□□□ -1.79
NF1-223	ENST00000584328	MEGF8	Q7Z7M0	2845 aa		3.86	□□□□□ -1.79
NF1-223	ENST00000584328	IGLV11-55	A0A075B6I3	123 aa		3.85	□□□□□ -1.79
NF1-223	ENST00000584328		A8MWL6	223 aa		3.85	□□□□□ -1.79
NF1-223	ENST00000584328		M0R2Z0	102 aa		3.85	□□□□□ -1.79
NF1-223	ENST00000584328	CRYBB3	P26998	211 aa		3.85	□□□□□ -1.79
NF1-223	ENST00000584328	RPL27A	P46776	148 aa	Known RBP	3.85	□□□□□ -1.79
NF1-223	ENST00000584328	TFPI2	P48307	235 aa		3.85	□□□□□ -1.79
NF1-223	ENST00000584328	HINT1	P49773	126 aa	Predicted RBP	3.85	□□□□□ -1.79
NF1-223	ENST00000584328	RAB9A	P51151	201 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms