RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 TMEM208Q9BTX3 173 aa8.48□□□□□ -1.05
CDRT1-207ENST00000583965 COLCA2A8K830 154 aa8.47□□□□□ -1.05
CDRT1-207ENST00000583965 NHLRC2Q8NBF2 726 aa8.47□□□□□ -1.05
CDRT1-207ENST00000583965 NEU1Q99519 415 aa8.47□□□□□ -1.05
CDRT1-207ENST00000583965 PYGO2Q9BRQ0 406 aa8.47□□□□□ -1.05
CDRT1-207ENST00000583965 LINC00467Q9BRT7 94 aa8.47□□□□□ -1.05
CDRT1-207ENST00000583965 ZMAT4Q9H898 229 aa8.47□□□□□ -1.05
CDRT1-207ENST00000583965 TENM3Q9P273 2699 aa8.47□□□□□ -1.05
CDRT1-207ENST00000583965 SMIM9A6NGZ8 99 aa8.46□□□□□ -1.06
CDRT1-207ENST00000583965 NHLRC4P0CG21 123 aaPredicted RBP8.46□□□□□ -1.06
CDRT1-207ENST00000583965 RBMY1A1P0DJD3 496 aaKnown RBP8.46□□□□□ -1.06
CDRT1-207ENST00000583965 RBMY1CP0DJD4 496 aa8.46□□□□□ -1.06
CDRT1-207ENST00000583965 MGST1P10620 155 aaKnown RBP8.46□□□□□ -1.06
CDRT1-207ENST00000583965 ZNF80P51504 273 aaPredicted RBP8.46□□□□□ -1.06
CDRT1-207ENST00000583965 OR5I1Q13606 314 aa8.46□□□□□ -1.06
CDRT1-207ENST00000583965 ELOBQ15370 118 aa8.46□□□□□ -1.06
CDRT1-207ENST00000583965 RBMY1FQ15415 496 aaKnown RBP8.46□□□□□ -1.06
CDRT1-207ENST00000583965 LINC01587Q99440 93 aa8.46□□□□□ -1.06
CDRT1-207ENST00000583965 OVOL2Q9BRP0 275 aa8.46□□□□□ -1.06
CDRT1-207ENST00000583965 V9GYV3 84 aa8.46□□□□□ -1.06
CDRT1-207ENST00000583965 PRKDCP78527 4128 aaKnown RBP8.46□□□□□ -1.06
CDRT1-207ENST00000583965 TRBV24-1A0A075B6N3 115 aa8.45□□□□□ -1.06
CDRT1-207ENST00000583965 TRAV9-1A0A075B6T8 112 aa8.45□□□□□ -1.06
CDRT1-207ENST00000583965 IGHV3OR16-12A0A075B7B8 117 aa8.45□□□□□ -1.06
CDRT1-207ENST00000583965 IGHV1OR15-1A0A075B7D0 117 aa8.45□□□□□ -1.06
CDRT1-207ENST00000583965 C19orf71A6NCJ1 209 aa8.45□□□□□ -1.06
CDRT1-207ENST00000583965 MIFP14174 115 aa8.45□□□□□ -1.06
CDRT1-207ENST00000583965 CRIP1P50238 77 aa8.45□□□□□ -1.06
CDRT1-207ENST00000583965 ERVFC1-1P60608 527 aa8.45□□□□□ -1.06
CDRT1-207ENST00000583965 TDRG1Q3Y452 100 aa8.45□□□□□ -1.06
CDRT1-207ENST00000583965 IBA57Q5T440 356 aaKnown RBP8.45□□□□□ -1.06
CDRT1-207ENST00000583965 FAM159AQ6UWV7 190 aa8.45□□□□□ -1.06
CDRT1-207ENST00000583965 OR11H2Q8NH07 326 aa8.45□□□□□ -1.06
CDRT1-207ENST00000583965 DAZAP1Q96EP5 407 aaKnown RBP8.45□□□□□ -1.06
CDRT1-207ENST00000583965 KCNS1Q96KK3 526 aa8.45□□□□□ -1.06
CDRT1-207ENST00000583965 SH2D1AO60880 128 aa8.44□□□□□ -1.06
CDRT1-207ENST00000583965 S100PP25815 95 aa8.44□□□□□ -1.06
CDRT1-207ENST00000583965 RRN3P1Q2M238 152 aa8.44□□□□□ -1.06
CDRT1-207ENST00000583965 ANXA2RQ3ZCQ2 193 aa8.44□□□□□ -1.06
CDRT1-207ENST00000583965 CT83Q5H943 113 aa8.44□□□□□ -1.06
CDRT1-207ENST00000583965 PRR27Q6MZM9 219 aa8.44□□□□□ -1.06
CDRT1-207ENST00000583965 KCNIP4Q6PIL6 250 aa8.44□□□□□ -1.06
CDRT1-207ENST00000583965 BTF3L4Q96K17 158 aa8.44□□□□□ -1.06
CDRT1-207ENST00000583965 IL36BQ9NZH7 164 aa8.44□□□□□ -1.06
CDRT1-207ENST00000583965 X6R8D5 127 aa8.44□□□□□ -1.06
CDRT1-207ENST00000583965 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
CDRT1-207ENST00000583965 Q6ZQT7 251 aa8.43□□□□□ -1.06
CDRT1-207ENST00000583965 ZNF493Q6ZR52 646 aa8.43□□□□□ -1.06
CDRT1-207ENST00000583965 NUDT10Q8NFP7 164 aa8.43□□□□□ -1.06
CDRT1-207ENST00000583965 NUDT11Q96G61 164 aa8.43□□□□□ -1.06
CDRT1-207ENST00000583965 C16orf74Q96GX8 76 aa8.43□□□□□ -1.06
CDRT1-207ENST00000583965 RNASE7Q9H1E1 156 aaKnown RBP8.43□□□□□ -1.06
CDRT1-207ENST00000583965 RETNQ9HD89 108 aa8.43□□□□□ -1.06
CDRT1-207ENST00000583965 NAGKQ9UJ70 344 aa8.43□□□□□ -1.06
CDRT1-207ENST00000583965 TRGV11A0A075B6L2 103 aa8.42□□□□□ -1.06
CDRT1-207ENST00000583965 SMIM27A0A1W2PRY6 76 aa8.42□□□□□ -1.06
CDRT1-207ENST00000583965 TMEM189A5PLL7 270 aa8.42□□□□□ -1.06
CDRT1-207ENST00000583965 CBY3A6NI87 242 aa8.42□□□□□ -1.06
CDRT1-207ENST00000583965 ZNF705GA8MUZ8 300 aaPredicted RBP8.42□□□□□ -1.06
CDRT1-207ENST00000583965 GATCO43716 136 aaKnown RBP8.42□□□□□ -1.06
CDRT1-207ENST00000583965 ORM1P02763 201 aa8.42□□□□□ -1.06
CDRT1-207ENST00000583965 TYMSP04818 313 aa8.42□□□□□ -1.06
CDRT1-207ENST00000583965 MUC21Q5SSG8 566 aa8.42□□□□□ -1.06
CDRT1-207ENST00000583965 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.42□□□□□ -1.06
CDRT1-207ENST00000583965 TMEM263Q8WUH6 116 aaKnown RBP8.42□□□□□ -1.06
CDRT1-207ENST00000583965 C11orf21Q9P2W6 132 aa8.42□□□□□ -1.06
CDRT1-207ENST00000583965 MUC4Q99102 2169 aa8.42□□□□□ -1.06
CDRT1-207ENST00000583965 DNAH9Q9NYC9 4486 aa8.42□□□□□ -1.06
CDRT1-207ENST00000583965 FAM231BA6NCW3 169 aa8.41□□□□□ -1.06
CDRT1-207ENST00000583965 P01737 135 aa8.41□□□□□ -1.06
CDRT1-207ENST00000583965 CXCL1P09341 107 aa8.41□□□□□ -1.06
CDRT1-207ENST00000583965 HTN1P15515 57 aa8.41□□□□□ -1.06
CDRT1-207ENST00000583965 RAB5AP20339 215 aa8.41□□□□□ -1.06
CDRT1-207ENST00000583965 DNLZQ5SXM8 178 aa8.41□□□□□ -1.06
CDRT1-207ENST00000583965 Q8NAQ8 132 aa8.41□□□□□ -1.06
CDRT1-207ENST00000583965 RNASE8Q8TDE3 154 aaKnown RBP8.41□□□□□ -1.06
CDRT1-207ENST00000583965 GFRA4Q9GZZ7 299 aa8.41□□□□□ -1.06
CDRT1-207ENST00000583965 RPP21Q9H633 154 aaKnown RBP8.41□□□□□ -1.06
CDRT1-207ENST00000583965 URGCP-MRPS24S4R325 110 aa8.41□□□□□ -1.06
CDRT1-207ENST00000583965 TGIF2-C20orf24A0A0A6YYL0 155 aa8.4□□□□□ -1.06
CDRT1-207ENST00000583965 IGKV3D-20A0A0C4DH25 116 aa8.4□□□□□ -1.06
CDRT1-207ENST00000583965 XKRY2A2RUG3 117 aa8.4□□□□□ -1.06
CDRT1-207ENST00000583965 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.06
CDRT1-207ENST00000583965 ZNF415Q09FC8 603 aa8.4□□□□□ -1.06
CDRT1-207ENST00000583965 TSKUQ8WUA8 353 aa8.4□□□□□ -1.06
CDRT1-207ENST00000583965 FAM210BQ96KR6 192 aa8.4□□□□□ -1.06
CDRT1-207ENST00000583965 C11orf68Q9H3H3 251 aaKnown RBP8.4□□□□□ -1.06
CDRT1-207ENST00000583965 TP53TG3Q9ULZ0 132 aa8.4□□□□□ -1.06
CDRT1-207ENST00000583965 TGP01266 2768 aa8.4□□□□□ -1.06
CDRT1-207ENST00000583965 IGHV4-28A0A0C4DH34 117 aa8.39□□□□□ -1.07
CDRT1-207ENST00000583965 A8MWL6 223 aa8.39□□□□□ -1.07
CDRT1-207ENST00000583965 PRM2P04554 102 aa8.39□□□□□ -1.07
CDRT1-207ENST00000583965 AZU1P20160 251 aa8.39□□□□□ -1.07
CDRT1-207ENST00000583965 ASIPP42127 132 aa8.39□□□□□ -1.07
CDRT1-207ENST00000583965 TCL1AP56279 114 aa8.39□□□□□ -1.07
CDRT1-207ENST00000583965 C11orf72Q8NBR9 251 aa8.39□□□□□ -1.07
CDRT1-207ENST00000583965 OR2D3Q8NGH3 330 aa8.39□□□□□ -1.07
CDRT1-207ENST00000583965 STAB2Q8WWQ8 2551 aa8.39□□□□□ -1.07
CDRT1-207ENST00000583965 NACAE9PAV3 2078 aa8.38□□□□□ -1.07
CDRT1-207ENST00000583965 IGHV3-16A0A0C4DH30 117 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms