RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 IGHV1OR15-1A0A075B7D0 117 aa11.86□□□□□ -0.51
CDK5RAP3-228ENST00000583363 B4DEV8 164 aa11.86□□□□□ -0.51
CDK5RAP3-228ENST00000583363 GATCO43716 136 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-228ENST00000583363 TDRG1Q3Y452 100 aa11.86□□□□□ -0.51
CDK5RAP3-228ENST00000583363 ANXA2RQ3ZCQ2 193 aa11.86□□□□□ -0.51
CDK5RAP3-228ENST00000583363 LINC01559Q495D7 138 aa11.86□□□□□ -0.51
CDK5RAP3-228ENST00000583363 MUC21Q5SSG8 566 aa11.86□□□□□ -0.51
CDK5RAP3-228ENST00000583363 ZNF705AQ6ZN79 300 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-228ENST00000583363 PYGO2Q9BRQ0 406 aa11.86□□□□□ -0.51
CDK5RAP3-228ENST00000583363 TMEM189A5PLL7 270 aa11.85□□□□□ -0.51
CDK5RAP3-228ENST00000583363 RNF212Q495C1 297 aa11.85□□□□□ -0.51
CDK5RAP3-228ENST00000583363 FAM159AQ6UWV7 190 aa11.85□□□□□ -0.51
CDK5RAP3-228ENST00000583363 C15orf54Q8N8G6 183 aa11.85□□□□□ -0.51
CDK5RAP3-228ENST00000583363 RNF183Q96D59 192 aa11.85□□□□□ -0.51
CDK5RAP3-228ENST00000583363 TMEM208Q9BTX3 173 aa11.85□□□□□ -0.51
CDK5RAP3-228ENST00000583363 NAGKQ9UJ70 344 aa11.85□□□□□ -0.51
CDK5RAP3-228ENST00000583363 IGHV3OR16-12A0A075B7B8 117 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 C7orf77A4D0Y5 90 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 ZNF705GA8MUZ8 300 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 GNRH2O43555 120 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 SNAPINO95295 136 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 MT-ND4LP03901 98 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 PRM2P04554 102 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 RPL19P84098 196 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 SBSPONQ8IVN8 264 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 OR2D3Q8NGH3 330 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 ANAPC16Q96DE5 110 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 KCNS1Q96KK3 526 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 WWC2-AS2Q96NR7 200 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 RCHY1Q96PM5 261 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 RPP21Q9H633 154 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 V9GYV3 84 aa11.84□□□□□ -0.51
CDK5RAP3-228ENST00000583363 PPP1R2P9O14990 202 aa11.83□□□□□ -0.52
CDK5RAP3-228ENST00000583363 S100A1P23297 94 aa11.83□□□□□ -0.52
CDK5RAP3-228ENST00000583363 RPS20P60866 119 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-228ENST00000583363 DEFB135Q30KP9 77 aa11.83□□□□□ -0.52
CDK5RAP3-228ENST00000583363 TP53TG3Q9ULZ0 132 aa11.83□□□□□ -0.52
CDK5RAP3-228ENST00000583363 TMSB15BA0A087X1C1 80 aa11.82□□□□□ -0.52
CDK5RAP3-228ENST00000583363 SPRY2O43597 315 aa11.82□□□□□ -0.52
CDK5RAP3-228ENST00000583363 TYMSP04818 313 aa11.82□□□□□ -0.52
CDK5RAP3-228ENST00000583363 HTN1P15515 57 aa11.82□□□□□ -0.52
CDK5RAP3-228ENST00000583363 RHEBQ15382 184 aa11.82□□□□□ -0.52
CDK5RAP3-228ENST00000583363 CT83Q5H943 113 aa11.82□□□□□ -0.52
CDK5RAP3-228ENST00000583363 NEU1Q99519 415 aa11.82□□□□□ -0.52
CDK5RAP3-228ENST00000583363 CTDSP1Q9GZU7 261 aa11.82□□□□□ -0.52
CDK5RAP3-228ENST00000583363 TP53TG1Q9Y2A0 90 aa11.82□□□□□ -0.52
CDK5RAP3-228ENST00000583363 X6R8D5 127 aa11.82□□□□□ -0.52
CDK5RAP3-228ENST00000583363 GRIFINA4D1Z8 144 aa11.81□□□□□ -0.52
CDK5RAP3-228ENST00000583363 CBY3A6NI87 242 aa11.81□□□□□ -0.52
CDK5RAP3-228ENST00000583363 CXCL1P09341 107 aa11.81□□□□□ -0.52
CDK5RAP3-228ENST00000583363 AZU1P20160 251 aa11.81□□□□□ -0.52
CDK5RAP3-228ENST00000583363 DNLZQ5SXM8 178 aa11.81□□□□□ -0.52
CDK5RAP3-228ENST00000583363 ATRAIDQ6UW56 229 aa11.81□□□□□ -0.52
CDK5RAP3-228ENST00000583363 B9D2Q9BPU9 175 aa11.81□□□□□ -0.52
CDK5RAP3-228ENST00000583363 OVOL2Q9BRP0 275 aa11.81□□□□□ -0.52
CDK5RAP3-228ENST00000583363 TRGV11A0A075B6L2 103 aa11.8□□□□□ -0.52
CDK5RAP3-228ENST00000583363 A0A087WWC5 75 aa11.8□□□□□ -0.52
CDK5RAP3-228ENST00000583363 XKRY2A2RUG3 117 aa11.8□□□□□ -0.52
CDK5RAP3-228ENST00000583363 SMIM9A6NGZ8 99 aa11.8□□□□□ -0.52
CDK5RAP3-228ENST00000583363 A8MWL6 223 aa11.8□□□□□ -0.52
CDK5RAP3-228ENST00000583363 GZMBP10144 247 aa11.8□□□□□ -0.52
CDK5RAP3-228ENST00000583363 OR11H2Q8NH07 326 aa11.8□□□□□ -0.52
CDK5RAP3-228ENST00000583363 RPS10P5Q9NQ39 176 aa11.8□□□□□ -0.52
CDK5RAP3-228ENST00000583363 TMEM242Q9NWH2 141 aa11.8□□□□□ -0.52
CDK5RAP3-228ENST00000583363 IGHV3-16A0A0C4DH30 117 aa11.79□□□□□ -0.52
CDK5RAP3-228ENST00000583363 RRN3P1Q2M238 152 aa11.79□□□□□ -0.52
CDK5RAP3-228ENST00000583363 TSKUQ8WUA8 353 aa11.79□□□□□ -0.52
CDK5RAP3-228ENST00000583363 TM2D3Q9BRN9 247 aa11.79□□□□□ -0.52
CDK5RAP3-228ENST00000583363 MDFICQ9P1T7 246 aa11.79□□□□□ -0.52
CDK5RAP3-228ENST00000583363 FOXA3P55318 350 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-228ENST00000583363 GTSF1Q8WW33 167 aa11.78□□□□□ -0.52
CDK5RAP3-228ENST00000583363 GFRA4Q9GZZ7 299 aa11.78□□□□□ -0.52
CDK5RAP3-228ENST00000583363 IL36BQ9NZH7 164 aa11.78□□□□□ -0.52
CDK5RAP3-228ENST00000583363 SMIM27A0A1W2PRY6 76 aa11.77□□□□□ -0.53
CDK5RAP3-228ENST00000583363 FAM231BA6NCW3 169 aa11.77□□□□□ -0.53
CDK5RAP3-228ENST00000583363 IGLC6P0CF74 106 aa11.77□□□□□ -0.53
CDK5RAP3-228ENST00000583363 RNASE3P12724 160 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-228ENST00000583363 ASIPP42127 132 aa11.77□□□□□ -0.53
CDK5RAP3-228ENST00000583363 ZNF493Q6ZR52 646 aa11.77□□□□□ -0.53
CDK5RAP3-228ENST00000583363 C11orf72Q8NBR9 251 aa11.77□□□□□ -0.53
CDK5RAP3-228ENST00000583363 RNASE8Q8TDE3 154 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-228ENST00000583363 TMEM263Q8WUH6 116 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-228ENST00000583363 SSBP4Q9BWG4 385 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-228ENST00000583363 RETNQ9HD89 108 aa11.77□□□□□ -0.53
CDK5RAP3-228ENST00000583363 ARMS2P0C7Q2 107 aa11.76□□□□□ -0.53
CDK5RAP3-228ENST00000583363 MED14OSP0DP75 135 aa11.76□□□□□ -0.53
CDK5RAP3-228ENST00000583363 MIFP14174 115 aa11.76□□□□□ -0.53
CDK5RAP3-228ENST00000583363 S100A4P26447 101 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-228ENST00000583363 C16orf74Q96GX8 76 aa11.76□□□□□ -0.53
CDK5RAP3-228ENST00000583363 IMMP2LQ96T52 175 aa11.76□□□□□ -0.53
CDK5RAP3-228ENST00000583363 SPATA25Q9BR10 227 aa11.76□□□□□ -0.53
CDK5RAP3-228ENST00000583363 SCRT2Q9NQ03 307 aa11.76□□□□□ -0.53
CDK5RAP3-228ENST00000583363 GSN-AS1Q9NRJ2 163 aa11.76□□□□□ -0.53
CDK5RAP3-228ENST00000583363 HUWE1Q7Z6Z7 4374 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-228ENST00000583363 A0A1W2PPQ1 181 aa11.75□□□□□ -0.53
CDK5RAP3-228ENST00000583363 PLAC8L1A1L4L8 177 aa11.75□□□□□ -0.53
CDK5RAP3-228ENST00000583363 SNAI2O43623 268 aa11.75□□□□□ -0.53
CDK5RAP3-228ENST00000583363 FER1L6-AS1Q8NA97 138 aa11.75□□□□□ -0.53
CDK5RAP3-228ENST00000583363 C9orf85Q96MD7 179 aa11.75□□□□□ -0.53
CDK5RAP3-228ENST00000583363 HIGD1CA8MV81 97 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms