RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 TMEM35BQ8NCS4 154 aa0.4□□□□□ -2.35
SMARCE1-219ENST00000583294 MAST4O15021 2626 aa0.39□□□□□ -2.35
SMARCE1-219ENST00000583294 IGHV1-24A0A0C4DH33 117 aa0.39□□□□□ -2.35
SMARCE1-219ENST00000583294 A0A0G2JMM0 328 aa0.39□□□□□ -2.35
SMARCE1-219ENST00000583294 RHOHQ15669 191 aa0.39□□□□□ -2.35
SMARCE1-219ENST00000583294 ABCA1O95477 2261 aa0.39□□□□□ -2.35
SMARCE1-219ENST00000583294 SPAG17Q6Q759 2223 aa0.38□□□□□ -2.35
SMARCE1-219ENST00000583294 DMAC1Q96GE9 116 aa0.38□□□□□ -2.35
SMARCE1-219ENST00000583294 SELENOSQ9BQE4 189 aa0.38□□□□□ -2.35
SMARCE1-219ENST00000583294 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
SMARCE1-219ENST00000583294 UQCRQO14949 82 aa0.37□□□□□ -2.35
SMARCE1-219ENST00000583294 SLC25A5P05141 298 aaKnown RBP0.37□□□□□ -2.35
SMARCE1-219ENST00000583294 PCBD1P61457 104 aa0.37□□□□□ -2.35
SMARCE1-219ENST00000583294 ASB16-AS1Q495Z4 193 aa0.37□□□□□ -2.35
SMARCE1-219ENST00000583294 SPINK6Q6UWN8 80 aa0.37□□□□□ -2.35
SMARCE1-219ENST00000583294 SMIM15Q7Z3B0 74 aa0.37□□□□□ -2.35
SMARCE1-219ENST00000583294 RBBP6Q7Z6E9 1792 aaKnown RBP0.37□□□□□ -2.35
SMARCE1-219ENST00000583294 UNQ5815/PRO19632Q6UWF5 114 aa0.36□□□□□ -2.35
SMARCE1-219ENST00000583294 ATG5Q9H1Y0 275 aa0.36□□□□□ -2.35
SMARCE1-219ENST00000583294 CDK12Q9NYV4 1490 aaPredicted RBP0.35□□□□□ -2.35
SMARCE1-219ENST00000583294 TCRAP04437 139 aa0.35□□□□□ -2.35
SMARCE1-219ENST00000583294 DDA1Q9BW61 102 aa0.35□□□□□ -2.35
SMARCE1-219ENST00000583294 TPRP12270 2363 aaKnown RBP0.35□□□□□ -2.35
SMARCE1-219ENST00000583294 CD3DP04234 171 aa0.34□□□□□ -2.36
SMARCE1-219ENST00000583294 ADCYAP1P18509 176 aa0.34□□□□□ -2.36
SMARCE1-219ENST00000583294 PSPHP78330 225 aa0.34□□□□□ -2.36
SMARCE1-219ENST00000583294 ZCCHC6Q5VYS8 1495 aaKnown RBP0.34□□□□□ -2.36
SMARCE1-219ENST00000583294 RREB1Q92766 1687 aa0.33□□□□□ -2.36
SMARCE1-219ENST00000583294 MED23Q9ULK4 1368 aa0.33□□□□□ -2.36
SMARCE1-219ENST00000583294 HELZP42694 1942 aaKnown RBP0.33□□□□□ -2.36
SMARCE1-219ENST00000583294 CCKP06307 115 aa0.33□□□□□ -2.36
SMARCE1-219ENST00000583294 OR4S1Q8NGB4 309 aa0.33□□□□□ -2.36
SMARCE1-219ENST00000583294 NDUFAF1Q9Y375 327 aa0.33□□□□□ -2.36
SMARCE1-219ENST00000583294 PTPRZ1P23471 2315 aaPredicted RBP0.32□□□□□ -2.36
SMARCE1-219ENST00000583294 LRP5O75197 1615 aa0.32□□□□□ -2.36
SMARCE1-219ENST00000583294 J3KT08 172 aa0.32□□□□□ -2.36
SMARCE1-219ENST00000583294 POLR2JP52435 117 aaKnown RBP0.32□□□□□ -2.36
SMARCE1-219ENST00000583294 HSD17B12Q53GQ0 312 aa0.32□□□□□ -2.36
SMARCE1-219ENST00000583294 SKA2Q8WVK7 121 aaPredicted RBP0.32□□□□□ -2.36
SMARCE1-219ENST00000583294 KMT2DO14686 5537 aa0.32□□□□□ -2.36
SMARCE1-219ENST00000583294 CPDO75976 1380 aa0.32□□□□□ -2.36
SMARCE1-219ENST00000583294 XIRP1Q702N8 1843 aaKnown RBP0.31□□□□□ -2.36
SMARCE1-219ENST00000583294 OVOS2A0A0G2JMS6 1433 aa0.31□□□□□ -2.36
SMARCE1-219ENST00000583294 TRAV17A0A0B4J275 112 aa0.31□□□□□ -2.36
SMARCE1-219ENST00000583294 PNMA8CA0A1B0GUJ8 204 aa0.31□□□□□ -2.36
SMARCE1-219ENST00000583294 TSTD3H0UI37 97 aa0.31□□□□□ -2.36
SMARCE1-219ENST00000583294 KLKP1Q107X0 134 aa0.31□□□□□ -2.36
SMARCE1-219ENST00000583294 OR8I2Q8N0Y5 310 aa0.31□□□□□ -2.36
SMARCE1-219ENST00000583294 TMEM14BQ9NUH8 114 aa0.31□□□□□ -2.36
SMARCE1-219ENST00000583294 DLEC1Q9Y238 1755 aa0.31□□□□□ -2.36
SMARCE1-219ENST00000583294 CACNA1HO95180 2353 aa0.31□□□□□ -2.36
SMARCE1-219ENST00000583294 ZFYVE26Q68DK2 2539 aa0.3□□□□□ -2.36
SMARCE1-219ENST00000583294 ABCA4P78363 2273 aa0.3□□□□□ -2.36
SMARCE1-219ENST00000583294 KIDINS220Q9ULH0 1771 aa0.3□□□□□ -2.36
SMARCE1-219ENST00000583294 DPM2O94777 84 aa0.3□□□□□ -2.36
SMARCE1-219ENST00000583294 PTPRGP23470 1445 aa0.3□□□□□ -2.36
SMARCE1-219ENST00000583294 JMJD1CQ15652 2540 aa0.29□□□□□ -2.36
SMARCE1-219ENST00000583294 PIEZO1Q92508 2521 aa0.29□□□□□ -2.36
SMARCE1-219ENST00000583294 WDR97A6NE52 1622 aa0.29□□□□□ -2.36
SMARCE1-219ENST00000583294 MT-ND4LP03901 98 aa0.29□□□□□ -2.36
SMARCE1-219ENST00000583294 TFF1P04155 84 aa0.29□□□□□ -2.36
SMARCE1-219ENST00000583294 HIST1H1BP16401 226 aaKnown RBP0.29□□□□□ -2.36
SMARCE1-219ENST00000583294 SDC4P31431 198 aa0.29□□□□□ -2.36
SMARCE1-219ENST00000583294 CALML5Q9NZT1 146 aa0.29□□□□□ -2.36
SMARCE1-219ENST00000583294 METTL1Q9UBP6 276 aaKnown RBP0.29□□□□□ -2.36
SMARCE1-219ENST00000583294 IGF2RP11717 2491 aa0.29□□□□□ -2.36
SMARCE1-219ENST00000583294 TRBV10-1A0A0K0K1A3 114 aa0.28□□□□□ -2.36
SMARCE1-219ENST00000583294 PAEPP09466 180 aa0.28□□□□□ -2.36
SMARCE1-219ENST00000583294 TTC28Q96AY4 2481 aa0.28□□□□□ -2.36
SMARCE1-219ENST00000583294 KDM5CP41229 1560 aa0.28□□□□□ -2.37
SMARCE1-219ENST00000583294 H0YJX3 145 aa0.27□□□□□ -2.37
SMARCE1-219ENST00000583294 Q5XG85 94 aa0.27□□□□□ -2.37
SMARCE1-219ENST00000583294 SLC35B3Q9H1N7 401 aa0.27□□□□□ -2.37
SMARCE1-219ENST00000583294 GINS2Q9Y248 185 aa0.27□□□□□ -2.37
SMARCE1-219ENST00000583294 MPC1LP0DKB6 136 aa0.26□□□□□ -2.37
SMARCE1-219ENST00000583294 RPS28P62857 69 aaKnown RBP0.26□□□□□ -2.37
SMARCE1-219ENST00000583294 OR8B8Q15620 311 aa0.26□□□□□ -2.37
SMARCE1-219ENST00000583294 HSPB11Q9Y547 144 aa0.26□□□□□ -2.37
SMARCE1-219ENST00000583294 BLMP54132 1417 aaPredicted RBP0.26□□□□□ -2.37
SMARCE1-219ENST00000583294 ARHGAP31Q2M1Z3 1444 aa0.26□□□□□ -2.37
SMARCE1-219ENST00000583294 TANC1Q9C0D5 1861 aa0.26□□□□□ -2.37
SMARCE1-219ENST00000583294 MED13LQ71F56 2210 aa0.26□□□□□ -2.37
SMARCE1-219ENST00000583294 TRAV36DV7A0A075B6V5 113 aa0.25□□□□□ -2.37
SMARCE1-219ENST00000583294 GNG14A0A1W2PPG7 69 aa0.25□□□□□ -2.37
SMARCE1-219ENST00000583294 PLGLB1Q02325 96 aa0.25□□□□□ -2.37
SMARCE1-219ENST00000583294 BANF2Q9H503 90 aa0.25□□□□□ -2.37
SMARCE1-219ENST00000583294 ABCA12Q86UK0 2595 aa0.24□□□□□ -2.37
SMARCE1-219ENST00000583294 A0A096LNT2 108 aa0.24□□□□□ -2.37
SMARCE1-219ENST00000583294 OR2H2O95918 312 aa0.23□□□□□ -2.37
SMARCE1-219ENST00000583294 TMEM244Q5VVB8 128 aa0.23□□□□□ -2.37
SMARCE1-219ENST00000583294 TMEM91Q6ZNR0 172 aa0.23□□□□□ -2.37
SMARCE1-219ENST00000583294 DSCR8Q96T75 97 aa0.23□□□□□ -2.37
SMARCE1-219ENST00000583294 MYO7AQ13402 2215 aa0.22□□□□□ -2.37
SMARCE1-219ENST00000583294 SMIM24O75264 130 aa0.22□□□□□ -2.37
SMARCE1-219ENST00000583294 CMPK1P30085 196 aa0.22□□□□□ -2.37
SMARCE1-219ENST00000583294 AKR1D1P51857 326 aa0.22□□□□□ -2.37
SMARCE1-219ENST00000583294 SLC25A26Q70HW3 274 aa0.22□□□□□ -2.37
SMARCE1-219ENST00000583294 TMEM141Q96I45 108 aa0.22□□□□□ -2.37
SMARCE1-219ENST00000583294 PROK2Q9HC23 129 aa0.22□□□□□ -2.37
SMARCE1-219ENST00000583294 MRPL40Q9NQ50 206 aaKnown RBP0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms