RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 LSM2Q9Y333 95 aaKnown RBP0.43□□□□□ -2.34
TTC39C-207ENST00000581394 FANCMQ8IYD8 2048 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 FRAS1Q86XX4 4008 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 TRBV30A0A0K0K1B3 111 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 CXorf51AA0A1B0GTR3 108 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 DBIP07108 87 aaKnown RBP0.42□□□□□ -2.34
TTC39C-207ENST00000581394 ADCYAP1P18509 176 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 CKS1BP61024 79 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 PCBD1P61457 104 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 FXYD3Q14802 87 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 RHOHQ15669 191 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 XAF1Q6GPH4 301 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 ATOH7Q8N100 152 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 PLAC4Q8WY50 150 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 AP1S3Q96PC3 154 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 SMIM7Q9BQ49 75 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 SLC35B3Q9H1N7 401 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 MRPL35Q9NZE8 188 aaKnown RBP0.42□□□□□ -2.34
TTC39C-207ENST00000581394 GSKIPQ9P0R6 139 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 BOKQ9UMX3 212 aaPredicted RBP0.42□□□□□ -2.34
TTC39C-207ENST00000581394 KIAA1549LQ6ZVL6 1849 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 LRP5O75197 1615 aa0.42□□□□□ -2.34
TTC39C-207ENST00000581394 PTPRDP23468 1912 aa0.41□□□□□ -2.34
TTC39C-207ENST00000581394 TMEM30CPA0ZSE6 113 aa0.41□□□□□ -2.34
TTC39C-207ENST00000581394 BBIP1A8MTZ0 92 aa0.41□□□□□ -2.34
TTC39C-207ENST00000581394 PITX3O75364 302 aa0.41□□□□□ -2.34
TTC39C-207ENST00000581394 TSPAN19P0C672 248 aa0.41□□□□□ -2.34
TTC39C-207ENST00000581394 IGLC6P0CF74 106 aa0.41□□□□□ -2.34
TTC39C-207ENST00000581394 C10orf99Q6UWK7 81 aa0.41□□□□□ -2.34
TTC39C-207ENST00000581394 Q6ZQY7 126 aa0.41□□□□□ -2.34
TTC39C-207ENST00000581394 Q86TA4 180 aa0.41□□□□□ -2.34
TTC39C-207ENST00000581394 SPANXCQ9NY87 97 aa0.41□□□□□ -2.34
TTC39C-207ENST00000581394 KIDINS220Q9ULH0 1771 aa0.41□□□□□ -2.34
TTC39C-207ENST00000581394 FAM236AA0A1B0GUQ0 79 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 FAM236BA0A1B0GV22 79 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 TPST1O60507 370 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 SULT1C4O75897 302 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 TFF1P04155 84 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 MPC1LP0DKB6 136 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 LINC00694P0DN24 101 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 IL7P13232 177 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 HIST1H1BP16401 226 aaKnown RBP0.4□□□□□ -2.35
TTC39C-207ENST00000581394 KDELR1P24390 212 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 LSM3P62310 102 aaKnown RBP0.4□□□□□ -2.35
TTC39C-207ENST00000581394 IDO2Q6ZQW0 420 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 SLC25A26Q70HW3 274 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 OR8J3Q8NGG0 315 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 DMAC1Q96GE9 116 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 C10orf95Q9H7T3 257 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 CALML5Q9NZT1 146 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.4□□□□□ -2.35
TTC39C-207ENST00000581394 PTPRMP28827 1452 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 ZCCHC6Q5VYS8 1495 aaKnown RBP0.4□□□□□ -2.35
TTC39C-207ENST00000581394 KDM5CP41229 1560 aa0.4□□□□□ -2.35
TTC39C-207ENST00000581394 PRG4Q92954 1404 aaPredicted RBP0.39□□□□□ -2.35
TTC39C-207ENST00000581394 A0A0G2JMM0 328 aa0.39□□□□□ -2.35
TTC39C-207ENST00000581394 PNMA8CA0A1B0GUJ8 204 aa0.39□□□□□ -2.35
TTC39C-207ENST00000581394 M0R2P5 195 aa0.39□□□□□ -2.35
TTC39C-207ENST00000581394 LY6G6CO95867 125 aa0.39□□□□□ -2.35
TTC39C-207ENST00000581394 EVI2AP22794 236 aa0.39□□□□□ -2.35
TTC39C-207ENST00000581394 PLGLB1Q02325 96 aa0.39□□□□□ -2.35
TTC39C-207ENST00000581394 CLLU1Q5K131 121 aa0.39□□□□□ -2.35
TTC39C-207ENST00000581394 KNTC1P50748 2209 aa0.39□□□□□ -2.35
TTC39C-207ENST00000581394 MUC5ACP98088 5654 aa0.39□□□□□ -2.35
TTC39C-207ENST00000581394 ABCA4P78363 2273 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 ANK1P16157 1881 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 UHRF1BP1LA0JNW5 1464 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 SMIM24O75264 130 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 KRTAP2-3P0C7H8 128 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 CAV3P56539 151 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 ZNF56Q15929 161 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 SPINK9Q5DT21 86 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 ATP11AUNQ6ZP68 121 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 Q6ZS92 163 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 ATP6V0E2Q8NHE4 81 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 MAFIPQ8WZ33 124 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 KRTAP2-4Q9BYR9 128 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 KRTAP2-1Q9BYU5 128 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 OVOS2A0A0J9YW53 1432 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 OVOS2Q6IE36 1432 aa0.38□□□□□ -2.35
TTC39C-207ENST00000581394 SPTBP11277 2137 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 ERCC6Q03468 1493 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 TRBV20-1A0A075B6N2 111 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 TRBV10-1A0A0K0K1A3 114 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 HIGD1CA8MV81 97 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 M0R129 80 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 CCKP06307 115 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 IQCJQ1A5X6 159 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 SMIM21Q3B7S5 101 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 SNX29P2Q8IUI4 249 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 SMIM3Q9BZL3 60 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 ATG5Q9H1Y0 275 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 CEP152O94986 1710 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 FHAD1B1AJZ9 1412 aa0.37□□□□□ -2.35
TTC39C-207ENST00000581394 A0A096LNT2 108 aa0.36□□□□□ -2.35
TTC39C-207ENST00000581394 SLC25A6P12236 298 aa0.36□□□□□ -2.35
TTC39C-207ENST00000581394 RPL37P61927 97 aaKnown RBP0.36□□□□□ -2.35
TTC39C-207ENST00000581394 OR2T2Q6IF00 324 aa0.36□□□□□ -2.35
TTC39C-207ENST00000581394 ANP32BQ92688 251 aaKnown RBP0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms