RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 CLLU1Q5K131 121 aa13.74□□□□□ -0.21
LIMD2-209ENST00000580222 ZFAND2AQ8N6M9 145 aa13.74□□□□□ -0.21
LIMD2-209ENST00000580222 UBR4Q5T4S7 5183 aa13.74□□□□□ -0.21
LIMD2-209ENST00000580222 RNASE4P34096 147 aaKnown RBP13.73□□□□□ -0.21
LIMD2-209ENST00000580222 TMEM183BQ1AE95 376 aa13.73□□□□□ -0.21
LIMD2-209ENST00000580222 PRR9Q5T870 116 aa13.73□□□□□ -0.21
LIMD2-209ENST00000580222 C1orf134Q5TEV5 83 aa13.73□□□□□ -0.21
LIMD2-209ENST00000580222 C1orf158Q8N1D5 194 aa13.73□□□□□ -0.21
LIMD2-209ENST00000580222 MED9Q9NWA0 146 aa13.73□□□□□ -0.21
LIMD2-209ENST00000580222 MYCBP2O75592 4640 aa13.73□□□□□ -0.21
LIMD2-209ENST00000580222 TRAV12-3A0A0B4J271 114 aa13.72□□□□□ -0.21
LIMD2-209ENST00000580222 S100A9P06702 114 aaKnown RBP13.72□□□□□ -0.21
LIMD2-209ENST00000580222 SAPCD1Q5SSQ6 148 aa13.72□□□□□ -0.21
LIMD2-209ENST00000580222 TVP23CQ96ET8 276 aa13.72□□□□□ -0.21
LIMD2-209ENST00000580222 C8orf49Q96NF6 230 aa13.72□□□□□ -0.21
LIMD2-209ENST00000580222 C20orf144Q9BQM9 153 aa13.72□□□□□ -0.21
LIMD2-209ENST00000580222 NIPSNAP3BQ9BS92 247 aa13.72□□□□□ -0.21
LIMD2-209ENST00000580222 KLF12Q9Y4X4 402 aa13.72□□□□□ -0.21
LIMD2-209ENST00000580222 TRBV6-1A0A0K0K1D8 114 aa13.71□□□□□ -0.21
LIMD2-209ENST00000580222 DERL1Q9BUN8 251 aa13.71□□□□□ -0.21
LIMD2-209ENST00000580222 RPL35P42766 123 aaKnown RBP13.7□□□□□ -0.22
LIMD2-209ENST00000580222 SMUG1Q53HV7 270 aa13.7□□□□□ -0.22
LIMD2-209ENST00000580222 SOHLH1Q5JUK2 328 aa13.7□□□□□ -0.22
LIMD2-209ENST00000580222 ZNF705AQ6ZN79 300 aaPredicted RBP13.7□□□□□ -0.22
LIMD2-209ENST00000580222 TMEM256Q8N2U0 113 aa13.7□□□□□ -0.22
LIMD2-209ENST00000580222 LINC01587Q99440 93 aa13.7□□□□□ -0.22
LIMD2-209ENST00000580222 ZFP30Q9Y2G7 519 aa13.7□□□□□ -0.22
LIMD2-209ENST00000580222 TMEM250H0YL14 139 aa13.69□□□□□ -0.22
LIMD2-209ENST00000580222 H7BYZ3 331 aa13.69□□□□□ -0.22
LIMD2-209ENST00000580222 RGS13O14921 159 aa13.69□□□□□ -0.22
LIMD2-209ENST00000580222 CEBPGP53567 150 aa13.69□□□□□ -0.22
LIMD2-209ENST00000580222 TAS2R60P59551 318 aa13.69□□□□□ -0.22
LIMD2-209ENST00000580222 GCGP01275 180 aa13.68□□□□□ -0.22
LIMD2-209ENST00000580222 LTAP01374 205 aa13.68□□□□□ -0.22
LIMD2-209ENST00000580222 UBE2DNLQ8IWF7 75 aa13.68□□□□□ -0.22
LIMD2-209ENST00000580222 NDUFS6O75380 124 aaKnown RBP13.67□□□□□ -0.22
LIMD2-209ENST00000580222 HTN1P15515 57 aa13.67□□□□□ -0.22
LIMD2-209ENST00000580222 PEA15Q15121 130 aa13.67□□□□□ -0.22
LIMD2-209ENST00000580222 RRN3P1Q2M238 152 aa13.67□□□□□ -0.22
LIMD2-209ENST00000580222 ZNF674Q2M3X9 581 aa13.67□□□□□ -0.22
LIMD2-209ENST00000580222 CENPWQ5EE01 88 aa13.67□□□□□ -0.22
LIMD2-209ENST00000580222 Q6AWC8 147 aa13.67□□□□□ -0.22
LIMD2-209ENST00000580222 BAGE2Q86Y30 109 aa13.67□□□□□ -0.22
LIMD2-209ENST00000580222 NHLRC2Q8NBF2 726 aa13.67□□□□□ -0.22
LIMD2-209ENST00000580222 NEU1Q99519 415 aa13.67□□□□□ -0.22
LIMD2-209ENST00000580222 PARLQ9H300 379 aa13.67□□□□□ -0.22
LIMD2-209ENST00000580222 TRAV21A0A0B4J279 112 aa13.66□□□□□ -0.22
LIMD2-209ENST00000580222 ZNF705GA8MUZ8 300 aaPredicted RBP13.66□□□□□ -0.22
LIMD2-209ENST00000580222 ZNF324O75467 553 aaPredicted RBP13.66□□□□□ -0.22
LIMD2-209ENST00000580222 SRP19P09132 144 aaKnown RBP13.66□□□□□ -0.22
LIMD2-209ENST00000580222 GNG4P50150 75 aa13.66□□□□□ -0.22
LIMD2-209ENST00000580222 PYGO2Q9BRQ0 406 aa13.66□□□□□ -0.22
LIMD2-209ENST00000580222 RAB19A4D1S5 217 aa13.65□□□□□ -0.22
LIMD2-209ENST00000580222 SMIM9A6NGZ8 99 aa13.65□□□□□ -0.22
LIMD2-209ENST00000580222 SRSF3P84103 164 aaKnown RBP13.65□□□□□ -0.22
LIMD2-209ENST00000580222 TMEM183AQ8IXX5 376 aa13.65□□□□□ -0.22
LIMD2-209ENST00000580222 ZC2HC1AQ96GY0 325 aa13.65□□□□□ -0.22
LIMD2-209ENST00000580222 NAGKQ9UJ70 344 aa13.65□□□□□ -0.22
LIMD2-209ENST00000580222 PFN1P07737 140 aaKnown RBP13.64□□□□□ -0.23
LIMD2-209ENST00000580222 ZNF80P51504 273 aaPredicted RBP13.64□□□□□ -0.23
LIMD2-209ENST00000580222 MUC21Q5SSG8 566 aa13.64□□□□□ -0.23
LIMD2-209ENST00000580222 Q6ZQT7 251 aa13.64□□□□□ -0.23
LIMD2-209ENST00000580222 SMDT1Q9H4I9 107 aa13.64□□□□□ -0.23
LIMD2-209ENST00000580222 IGHV1OR15-1A0A075B7D0 117 aa13.63□□□□□ -0.23
LIMD2-209ENST00000580222 FAM159AQ6UWV7 190 aa13.63□□□□□ -0.23
LIMD2-209ENST00000580222 EIF4E3Q8N5X7 224 aaKnown RBP13.63□□□□□ -0.23
LIMD2-209ENST00000580222 SRRM2Q9UQ35 2752 aaKnown RBP13.63□□□□□ -0.23
LIMD2-209ENST00000580222 CBY3A6NI87 242 aa13.62□□□□□ -0.23
LIMD2-209ENST00000580222 PRM2P04554 102 aa13.62□□□□□ -0.23
LIMD2-209ENST00000580222 MGST1P10620 155 aaKnown RBP13.62□□□□□ -0.23
LIMD2-209ENST00000580222 RNF212Q495C1 297 aa13.62□□□□□ -0.23
LIMD2-209ENST00000580222 PRR27Q6MZM9 219 aa13.62□□□□□ -0.23
LIMD2-209ENST00000580222 COX8CQ7Z4L0 72 aa13.62□□□□□ -0.23
LIMD2-209ENST00000580222 SMIM12Q96EX1 92 aa13.62□□□□□ -0.23
LIMD2-209ENST00000580222 MLST8Q9BVC4 326 aa13.62□□□□□ -0.23
LIMD2-209ENST00000580222 TRBV20OR9-2A0A075B6H5 130 aa13.61□□□□□ -0.23
LIMD2-209ENST00000580222 PGPEP1LA6NFU8 196 aa13.61□□□□□ -0.23
LIMD2-209ENST00000580222 FABP5P3A8MUU1 101 aa13.61□□□□□ -0.23
LIMD2-209ENST00000580222 C9JCJ5 164 aa13.61□□□□□ -0.23
LIMD2-209ENST00000580222 SH2D1AO60880 128 aa13.61□□□□□ -0.23
LIMD2-209ENST00000580222 FAM162BQ5T6X4 162 aa13.61□□□□□ -0.23
LIMD2-209ENST00000580222 C16orf74Q96GX8 76 aa13.61□□□□□ -0.23
LIMD2-209ENST00000580222 SMIM7Q9BQ49 75 aa13.61□□□□□ -0.23
LIMD2-209ENST00000580222 LINC00467Q9BRT7 94 aa13.61□□□□□ -0.23
LIMD2-209ENST00000580222 TMEM189A5PLL7 270 aa13.6□□□□□ -0.23
LIMD2-209ENST00000580222 ZNF727A8MUV8 499 aa13.6□□□□□ -0.23
LIMD2-209ENST00000580222 C9JQL5 133 aa13.6□□□□□ -0.23
LIMD2-209ENST00000580222 AZU1P20160 251 aa13.6□□□□□ -0.23
LIMD2-209ENST00000580222 EMP1P54849 157 aa13.6□□□□□ -0.23
LIMD2-209ENST00000580222 ANXA2RQ3ZCQ2 193 aa13.6□□□□□ -0.23
LIMD2-209ENST00000580222 TMEM263Q8WUH6 116 aaKnown RBP13.6□□□□□ -0.23
LIMD2-209ENST00000580222 VPS13BQ7Z7G8 4022 aa13.6□□□□□ -0.23
LIMD2-209ENST00000580222 IGLV2-8P01709 118 aa13.59□□□□□ -0.23
LIMD2-209ENST00000580222 COMMD7Q86VX2 200 aa13.59□□□□□ -0.23
LIMD2-209ENST00000580222 KCNS1Q96KK3 526 aa13.59□□□□□ -0.23
LIMD2-209ENST00000580222 SDF2L1Q9HCN8 221 aa13.59□□□□□ -0.23
LIMD2-209ENST00000580222 NACAE9PAV3 2078 aa13.59□□□□□ -0.23
LIMD2-209ENST00000580222 TRGV11A0A075B6L2 103 aa13.58□□□□□ -0.24
LIMD2-209ENST00000580222 CRIP1P50238 77 aa13.58□□□□□ -0.24
LIMD2-209ENST00000580222 ZNF493Q6ZR52 646 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms