RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 KIR2DL5BA0A0G2JPC4 375 aa9.84□□□□□ -0.83
SRSF1-202ENST00000578430 G3V4G9 280 aa9.84□□□□□ -0.83
SRSF1-202ENST00000578430 KRTAP10-11P60412 298 aa9.84□□□□□ -0.83
SRSF1-202ENST00000578430 RPL19P84098 196 aaKnown RBP9.84□□□□□ -0.83
SRSF1-202ENST00000578430 KIR3DS1Q14943 382 aa9.84□□□□□ -0.83
SRSF1-202ENST00000578430 TDRG1Q3Y452 100 aa9.84□□□□□ -0.83
SRSF1-202ENST00000578430 KIR2DL5AQ8N109 375 aa9.84□□□□□ -0.83
SRSF1-202ENST00000578430 TMEM256Q8N2U0 113 aa9.84□□□□□ -0.83
SRSF1-202ENST00000578430 KIR2DL5BQ8NHK3 375 aa9.84□□□□□ -0.83
SRSF1-202ENST00000578430 TRAV12-2A0A075B6T6 113 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 A0A1W2PPQ1 181 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 A8MZ25 164 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 SCO1O75880 301 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 RPL35AP18077 110 aaKnown RBP9.83□□□□□ -0.84
SRSF1-202ENST00000578430 FOXA3P55318 350 aaPredicted RBP9.83□□□□□ -0.84
SRSF1-202ENST00000578430 FXYD7P58549 80 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 TMEM88Q6PEY1 159 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 FAM159AQ6UWV7 190 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 CBLN2Q8IUK8 224 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 PYGO2Q9BRQ0 406 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 LINC00467Q9BRT7 94 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 CSTL1Q9H114 145 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 C11orf21Q9P2W6 132 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 NAT8BQ9UHF3 227 aa9.83□□□□□ -0.84
SRSF1-202ENST00000578430 IGHV1OR15-1A0A075B7D0 117 aa9.82□□□□□ -0.84
SRSF1-202ENST00000578430 IGKV3D-20A0A0C4DH25 116 aa9.82□□□□□ -0.84
SRSF1-202ENST00000578430 APOC4P55056 127 aa9.82□□□□□ -0.84
SRSF1-202ENST00000578430 DNLZQ5SXM8 178 aa9.82□□□□□ -0.84
SRSF1-202ENST00000578430 KPRPQ5T749 579 aaPredicted RBP9.82□□□□□ -0.84
SRSF1-202ENST00000578430 NEU1Q99519 415 aa9.82□□□□□ -0.84
SRSF1-202ENST00000578430 XCL2Q9UBD3 114 aa9.82□□□□□ -0.84
SRSF1-202ENST00000578430 TRBV24-1A0A075B6N3 115 aa9.81□□□□□ -0.84
SRSF1-202ENST00000578430 UBE2CO00762 179 aa9.81□□□□□ -0.84
SRSF1-202ENST00000578430 CA1P00915 261 aaPredicted RBP9.81□□□□□ -0.84
SRSF1-202ENST00000578430 MED14OSP0DP75 135 aa9.81□□□□□ -0.84
SRSF1-202ENST00000578430 ANXA2RQ3ZCQ2 193 aa9.81□□□□□ -0.84
SRSF1-202ENST00000578430 YPEL4Q96NS1 127 aa9.81□□□□□ -0.84
SRSF1-202ENST00000578430 NAGKQ9UJ70 344 aa9.81□□□□□ -0.84
SRSF1-202ENST00000578430 GOLT1BQ9Y3E0 138 aa9.81□□□□□ -0.84
SRSF1-202ENST00000578430 TRGV11A0A075B6L2 103 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 TMSB15BA0A087X1C1 80 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 HIGD1CA8MV81 97 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 F2Z2F3 143 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 GIG44P09565 113 aaPredicted RBP9.8□□□□□ -0.84
SRSF1-202ENST00000578430 IGLC6P0CF74 106 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 IGHV4-30-4P0DP06 118 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 ASIPP42127 132 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 DEFA6Q01524 100 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 ELOBQ15370 118 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 MUC21Q5SSG8 566 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 FER1L6-AS1Q8NA97 138 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 GTSF1Q8WW33 167 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 URGCP-MRPS24S4R325 110 aa9.8□□□□□ -0.84
SRSF1-202ENST00000578430 PRKDCP78527 4128 aaKnown RBP9.79□□□□□ -0.84
SRSF1-202ENST00000578430 J3QL48 77 aa9.79□□□□□ -0.84
SRSF1-202ENST00000578430 CTRLP40313 264 aa9.79□□□□□ -0.84
SRSF1-202ENST00000578430 TCL1AP56279 114 aa9.79□□□□□ -0.84
SRSF1-202ENST00000578430 FAM3BP58499 235 aaPredicted RBP9.79□□□□□ -0.84
SRSF1-202ENST00000578430 WDR73Q6P4I2 378 aa9.79□□□□□ -0.84
SRSF1-202ENST00000578430 Q6ZQT7 251 aa9.79□□□□□ -0.84
SRSF1-202ENST00000578430 ATP5L2Q7Z4Y8 100 aa9.79□□□□□ -0.84
SRSF1-202ENST00000578430 ZNF575Q86XF7 245 aa9.79□□□□□ -0.84
SRSF1-202ENST00000578430 NUP35Q8NFH5 326 aa9.79□□□□□ -0.84
SRSF1-202ENST00000578430 BORCS7Q96B45 105 aa9.79□□□□□ -0.84
SRSF1-202ENST00000578430 LINC01587Q99440 93 aa9.79□□□□□ -0.84
SRSF1-202ENST00000578430 TMEM208Q9BTX3 173 aa9.79□□□□□ -0.84
SRSF1-202ENST00000578430 A0A1B0GW15 77 aa9.78□□□□□ -0.84
SRSF1-202ENST00000578430 GRIFINA4D1Z8 144 aa9.78□□□□□ -0.84
SRSF1-202ENST00000578430 TYMSP04818 313 aa9.78□□□□□ -0.84
SRSF1-202ENST00000578430 OR5AL1P0C617 328 aa9.78□□□□□ -0.84
SRSF1-202ENST00000578430 RBMY1A1P0DJD3 496 aaKnown RBP9.78□□□□□ -0.84
SRSF1-202ENST00000578430 RBMY1CP0DJD4 496 aa9.78□□□□□ -0.84
SRSF1-202ENST00000578430 GZMBP10144 247 aa9.78□□□□□ -0.84
SRSF1-202ENST00000578430 S100A4P26447 101 aaKnown RBP9.78□□□□□ -0.84
SRSF1-202ENST00000578430 RBMY1FQ15415 496 aaKnown RBP9.78□□□□□ -0.84
SRSF1-202ENST00000578430 COX19Q49B96 90 aa9.78□□□□□ -0.84
SRSF1-202ENST00000578430 RASL11AQ6T310 242 aa9.78□□□□□ -0.84
SRSF1-202ENST00000578430 C1orf158Q8N1D5 194 aa9.78□□□□□ -0.84
SRSF1-202ENST00000578430 CSNK1G2-AS1Q8NCQ2 148 aa9.78□□□□□ -0.84
SRSF1-202ENST00000578430 SSBP4Q9BWG4 385 aaPredicted RBP9.78□□□□□ -0.84
SRSF1-202ENST00000578430 TP53TG3Q9ULZ0 132 aa9.78□□□□□ -0.84
SRSF1-202ENST00000578430 CBY3A6NI87 242 aa9.77□□□□□ -0.85
SRSF1-202ENST00000578430 COLCA2A8K830 154 aa9.77□□□□□ -0.85
SRSF1-202ENST00000578430 SNAI2O43623 268 aa9.77□□□□□ -0.85
SRSF1-202ENST00000578430 PGLYRP4Q96LB8 373 aa9.77□□□□□ -0.85
SRSF1-202ENST00000578430 CNFNQ9BYD5 112 aa9.77□□□□□ -0.85
SRSF1-202ENST00000578430 DNAH3Q8TD57 4116 aa9.76□□□□□ -0.85
SRSF1-202ENST00000578430 IGHV3-16A0A0C4DH30 117 aa9.76□□□□□ -0.85
SRSF1-202ENST00000578430 A0A1B0GUT8 65 aa9.76□□□□□ -0.85
SRSF1-202ENST00000578430 GNRH2O43555 120 aa9.76□□□□□ -0.85
SRSF1-202ENST00000578430 S100A8P05109 93 aa9.76□□□□□ -0.85
SRSF1-202ENST00000578430 CACNG7P62955 275 aa9.76□□□□□ -0.85
SRSF1-202ENST00000578430 RIGQ13278 110 aa9.76□□□□□ -0.85
SRSF1-202ENST00000578430 LYZL1Q6UWQ5 148 aa9.76□□□□□ -0.85
SRSF1-202ENST00000578430 ZNF705AQ6ZN79 300 aaPredicted RBP9.76□□□□□ -0.85
SRSF1-202ENST00000578430 FAM210BQ96KR6 192 aa9.76□□□□□ -0.85
SRSF1-202ENST00000578430 SCRT2Q9NQ03 307 aa9.76□□□□□ -0.85
SRSF1-202ENST00000578430 TGIF2-C20orf24A0A0A6YYL0 155 aa9.75□□□□□ -0.85
SRSF1-202ENST00000578430 ARMS2P0C7Q2 107 aa9.75□□□□□ -0.85
SRSF1-202ENST00000578430 ZNF415Q09FC8 603 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms