RNA–Protein interactions for RNA: ENST00000578150.1

TTC39C-205, Transcript of tetratricopeptide repeat domain 39C, human

TSL 3

Gene TTC39C, Length 499 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC39C-205	ENST00000578150	TXNDC17	Q9BRA2	123 aa		13.22	□□□□□ -0.29
TTC39C-205	ENST00000578150	NDFIP1	Q9BT67	221 aa		13.22	□□□□□ -0.29
TTC39C-205	ENST00000578150	PSMG3	Q9BT73	122 aa	Predicted RBP	13.22	□□□□□ -0.29
TTC39C-205	ENST00000578150	SDF2L1	Q9HCN8	221 aa		13.22	□□□□□ -0.29
TTC39C-205	ENST00000578150	BATF3	Q9NR55	127 aa		13.22	□□□□□ -0.29
TTC39C-205	ENST00000578150	LY96	Q9Y6Y9	160 aa		13.22	□□□□□ -0.29
TTC39C-205	ENST00000578150	TRAV8-1	A0A0A6YYK1	113 aa		13.21	□□□□□ -0.29
TTC39C-205	ENST00000578150	EREG	O14944	169 aa		13.21	□□□□□ -0.29
TTC39C-205	ENST00000578150	HMGB3	O15347	200 aa	Known RBP	13.21	□□□□□ -0.29
TTC39C-205	ENST00000578150	GNRH2	O43555	120 aa		13.21	□□□□□ -0.29
TTC39C-205	ENST00000578150	MB	P02144	154 aa		13.21	□□□□□ -0.29
TTC39C-205	ENST00000578150	STAG3L2	P0CL84	134 aa		13.21	□□□□□ -0.29
TTC39C-205	ENST00000578150	STAG3L3	P0CL85	134 aa		13.21	□□□□□ -0.29
TTC39C-205	ENST00000578150	SH2D6	Q7Z4S9	175 aa		13.21	□□□□□ -0.29
TTC39C-205	ENST00000578150	AQP10	Q96PS8	301 aa		13.21	□□□□□ -0.29
TTC39C-205	ENST00000578150		F6UZH7	168 aa		13.2	□□□□□ -0.3
TTC39C-205	ENST00000578150		K7EQM0	130 aa		13.2	□□□□□ -0.3
TTC39C-205	ENST00000578150	TYMS	P04818	313 aa		13.2	□□□□□ -0.3
TTC39C-205	ENST00000578150	ERVFC1-1	P60608	527 aa		13.2	□□□□□ -0.3
TTC39C-205	ENST00000578150	GNG5	P63218	68 aa		13.2	□□□□□ -0.3
TTC39C-205	ENST00000578150	SERF2	P84101	59 aa		13.2	□□□□□ -0.3
TTC39C-205	ENST00000578150	C5orf17	Q8NAS9	161 aa		13.2	□□□□□ -0.3
TTC39C-205	ENST00000578150	HSD17B11	Q8NBQ5	300 aa		13.2	□□□□□ -0.3
TTC39C-205	ENST00000578150	SUN5	Q8TC36	379 aa		13.2	□□□□□ -0.3
TTC39C-205	ENST00000578150	PGPEP1	Q9NXJ5	209 aa		13.2	□□□□□ -0.3
TTC39C-205	ENST00000578150	APOB	P04114	4563 aa	Known RBP	13.19	□□□□□ -0.3
TTC39C-205	ENST00000578150	PTTG1	O95997	202 aa		13.19	□□□□□ -0.3
TTC39C-205	ENST00000578150	EVI2A	P22794	236 aa		13.19	□□□□□ -0.3
TTC39C-205	ENST00000578150	ASB13	Q8WXK3	278 aa		13.19	□□□□□ -0.3
TTC39C-205	ENST00000578150	TCRA	P04437	139 aa		13.18	□□□□□ -0.3
TTC39C-205	ENST00000578150	GCHFR	P30047	84 aa		13.18	□□□□□ -0.3
TTC39C-205	ENST00000578150	CDPF1	Q6NVV7	123 aa		13.18	□□□□□ -0.3
TTC39C-205	ENST00000578150		Q8N1X5	172 aa		13.18	□□□□□ -0.3
TTC39C-205	ENST00000578150	RAB24	Q969Q5	203 aa		13.18	□□□□□ -0.3
TTC39C-205	ENST00000578150	MED28	Q9H204	178 aa		13.18	□□□□□ -0.3
TTC39C-205	ENST00000578150	CIDEA	O60543	219 aa		13.17	□□□□□ -0.3
TTC39C-205	ENST00000578150	DNAH10OS	P0CZ25	163 aa		13.17	□□□□□ -0.3
TTC39C-205	ENST00000578150	ATP6V0C	P27449	155 aa		13.17	□□□□□ -0.3
TTC39C-205	ENST00000578150	TIRAP	P58753	221 aa		13.17	□□□□□ -0.3
TTC39C-205	ENST00000578150	TMEM167B	Q9NRX6	74 aa		13.17	□□□□□ -0.3
TTC39C-205	ENST00000578150	DNAH5	Q8TE73	4624 aa		13.17	□□□□□ -0.3
TTC39C-205	ENST00000578150	FBLL1	A6NHQ2	334 aa	Known RBP	13.16	□□□□□ -0.3
TTC39C-205	ENST00000578150	TAAR5	O14804	337 aa		13.16	□□□□□ -0.3
TTC39C-205	ENST00000578150	CXorf1	O96002	111 aa		13.16	□□□□□ -0.3
TTC39C-205	ENST00000578150	GATA1	P15976	413 aa	Predicted RBP	13.16	□□□□□ -0.3
TTC39C-205	ENST00000578150	WFDC10B	Q8IUB3	73 aa		13.16	□□□□□ -0.3
TTC39C-205	ENST00000578150	C10orf126	Q8N4M7	172 aa		13.16	□□□□□ -0.3
TTC39C-205	ENST00000578150	MSRB1	Q9NZV6	116 aa		13.16	□□□□□ -0.3
TTC39C-205	ENST00000578150	TNFSF18	Q9UNG2	199 aa		13.16	□□□□□ -0.3
TTC39C-205	ENST00000578150	ZFP69	Q49AA0	526 aa		13.15	□□□□□ -0.3
TTC39C-205	ENST00000578150	SGK494	Q96LW2	274 aa		13.15	□□□□□ -0.3
TTC39C-205	ENST00000578150	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.15	□□□□□ -0.3
TTC39C-205	ENST00000578150	PSG8	Q9UQ74	426 aa		13.15	□□□□□ -0.3
TTC39C-205	ENST00000578150	TNFRSF18	Q9Y5U5	241 aa		13.15	□□□□□ -0.3
TTC39C-205	ENST00000578150	PFN1	P07737	140 aa	Known RBP	13.14	□□□□□ -0.31
TTC39C-205	ENST00000578150	SUMO1	P63165	101 aa	Known RBP	13.14	□□□□□ -0.31
TTC39C-205	ENST00000578150	ZNF876P	Q49A33	203 aa		13.14	□□□□□ -0.31
TTC39C-205	ENST00000578150	CYB561D1	Q8N8Q1	229 aa		13.14	□□□□□ -0.31
TTC39C-205	ENST00000578150	EPDR1	Q9UM22	224 aa		13.14	□□□□□ -0.31
TTC39C-205	ENST00000578150	BOLA1	Q9Y3E2	137 aa		13.14	□□□□□ -0.31
TTC39C-205	ENST00000578150	GCG	P01275	180 aa		13.13	□□□□□ -0.31
TTC39C-205	ENST00000578150	IGLV2-11	P01706	119 aa		13.13	□□□□□ -0.31
TTC39C-205	ENST00000578150	GIP	P09681	153 aa	Predicted RBP	13.13	□□□□□ -0.31
TTC39C-205	ENST00000578150	ZNF80	P51504	273 aa	Predicted RBP	13.13	□□□□□ -0.31
TTC39C-205	ENST00000578150	FLI1	Q01543	452 aa	Predicted RBP	13.13	□□□□□ -0.31
TTC39C-205	ENST00000578150	SMUG1	Q53HV7	270 aa		13.13	□□□□□ -0.31
TTC39C-205	ENST00000578150	TMEM75	Q8N9X5	138 aa		13.13	□□□□□ -0.31
TTC39C-205	ENST00000578150	NHLRC2	Q8NBF2	726 aa		13.13	□□□□□ -0.31
TTC39C-205	ENST00000578150	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.13	□□□□□ -0.31
TTC39C-205	ENST00000578150	PTH2	Q96A98	100 aa		13.13	□□□□□ -0.31
TTC39C-205	ENST00000578150	SCRT2	Q9NQ03	307 aa		13.13	□□□□□ -0.31
TTC39C-205	ENST00000578150		A0A087WTM6	91 aa		13.12	□□□□□ -0.31
TTC39C-205	ENST00000578150	LOC100131303	A0A0U1RQF7	123 aa		13.12	□□□□□ -0.31
TTC39C-205	ENST00000578150	GGTLC3	B5MD39	225 aa		13.12	□□□□□ -0.31
TTC39C-205	ENST00000578150	CRYGD	P07320	174 aa		13.12	□□□□□ -0.31
TTC39C-205	ENST00000578150	PPT1	P50897	306 aa		13.12	□□□□□ -0.31
TTC39C-205	ENST00000578150	SAPCD1	Q5SSQ6	148 aa		13.12	□□□□□ -0.31
TTC39C-205	ENST00000578150	C9orf85	Q96MD7	179 aa		13.12	□□□□□ -0.31
TTC39C-205	ENST00000578150	PRADC1	Q9BSG0	188 aa		13.12	□□□□□ -0.31
TTC39C-205	ENST00000578150	SH3BGRL3	Q9H299	93 aa		13.12	□□□□□ -0.31
TTC39C-205	ENST00000578150	C11orf21	Q9P2W6	132 aa		13.12	□□□□□ -0.31
TTC39C-205	ENST00000578150	TRBV6-4	A0A1B0GX49	114 aa		13.11	□□□□□ -0.31
TTC39C-205	ENST00000578150		A0A1W2PRE2	83 aa		13.11	□□□□□ -0.31
TTC39C-205	ENST00000578150	RS1	O15537	224 aa		13.11	□□□□□ -0.31
TTC39C-205	ENST00000578150	RHOH	Q15669	191 aa		13.11	□□□□□ -0.31
TTC39C-205	ENST00000578150		Q5BKY6	102 aa		13.11	□□□□□ -0.31
TTC39C-205	ENST00000578150	CFAP126	Q5VTH2	177 aa		13.11	□□□□□ -0.31
TTC39C-205	ENST00000578150	PRNT	Q86SH4	94 aa		13.11	□□□□□ -0.31
TTC39C-205	ENST00000578150	SLC25A29	Q8N8R3	303 aa		13.11	□□□□□ -0.31
TTC39C-205	ENST00000578150	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.1	□□□□□ -0.31
TTC39C-205	ENST00000578150	IGHV3-38	A0A0C4DH36	116 aa		13.1	□□□□□ -0.31
TTC39C-205	ENST00000578150	LINC01556	Q5JQF7	62 aa		13.09	□□□□□ -0.31
TTC39C-205	ENST00000578150	TRAV8-6	A0A0B4J262	113 aa		13.08	□□□□□ -0.32
TTC39C-205	ENST00000578150	RNF222	A6NCQ9	220 aa		13.08	□□□□□ -0.32
TTC39C-205	ENST00000578150	MGST1	P10620	155 aa	Known RBP	13.08	□□□□□ -0.32
TTC39C-205	ENST00000578150	RPL7L1	Q6DKI1	246 aa	Known RBP	13.08	□□□□□ -0.32
TTC39C-205	ENST00000578150	DPPA3	Q6W0C5	159 aa		13.08	□□□□□ -0.32
TTC39C-205	ENST00000578150	CTXND1	A0A1B0GTU2	59 aa		13.07	□□□□□ -0.32
TTC39C-205	ENST00000578150	RNASE3	P12724	160 aa	Known RBP	13.07	□□□□□ -0.32
TTC39C-205	ENST00000578150	ZNF506	Q5JVG8	444 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 207 ms