RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 PPT1P50897 306 aa7.75□□□□□ -1.17
SMARCE1-214ENST00000578112 PYDC2Q56P42 97 aa7.75□□□□□ -1.17
SMARCE1-214ENST00000578112 IBA57Q5T440 356 aaKnown RBP7.75□□□□□ -1.17
SMARCE1-214ENST00000578112 LINC00305Q7Z4B0 112 aa7.75□□□□□ -1.17
SMARCE1-214ENST00000578112 PTH2Q96A98 100 aa7.75□□□□□ -1.17
SMARCE1-214ENST00000578112 COX7A2P2O60397 106 aa7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 CKS1BP61024 79 aa7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 Q6ZRN7 208 aaPredicted RBP7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 CBLN2Q8IUK8 224 aa7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 KRTAP1-5Q9BYS1 174 aa7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 TRAV9-2A0A087WT02 112 aa7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 NDUFB6O95139 128 aa7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 PDE6HQ13956 83 aa7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 COL5A1-AS1Q5SY13 56 aa7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 ERASQ7Z444 233 aa7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 LINC00477Q96M19 166 aa7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 TMEM14CQ9P0S9 112 aa7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 V9GYH0 126 aa7.74□□□□□ -1.17
SMARCE1-214ENST00000578112 H3BP45 60 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 PRM2P04554 102 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 C10orf113Q5VZT2 155 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 CST9LQ9H4G1 147 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 ICOSQ9Y6W8 199 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 A0A096LPF7 62 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 TGIF2-C20orf24A0A0A6YYL0 155 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 GAGE12BA1L429 117 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 C7orf71A4D174 169 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 AGPAT2O15120 278 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 SSSCA1O60232 199 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 GAGE7O76087 117 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 MT-ND4LP03901 98 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 GAGE12FP0CL80 117 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 GAGE12GP0CL81 117 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 GAGE12IP0CL82 117 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 RPL32P62910 135 aaKnown RBP7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 Q6ZRG5 221 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 LYPD1Q8N2G4 141 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 FAM19A4Q96LR4 140 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 UHRF2Q96PU4 802 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 SSBP4Q9BWG4 385 aaPredicted RBP7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 ZNF586Q9NXT0 402 aa7.73□□□□□ -1.17
SMARCE1-214ENST00000578112 KLLNB2CW77 178 aa7.72□□□□□ -1.17
SMARCE1-214ENST00000578112 SPINK4O60575 86 aa7.72□□□□□ -1.17
SMARCE1-214ENST00000578112 CRISP2P16562 243 aa7.72□□□□□ -1.17
SMARCE1-214ENST00000578112 TCL1AP56279 114 aa7.72□□□□□ -1.17
SMARCE1-214ENST00000578112 LINC00315P59091 139 aa7.72□□□□□ -1.17
SMARCE1-214ENST00000578112 KRTAP10-2P60368 255 aa7.72□□□□□ -1.17
SMARCE1-214ENST00000578112 C10orf91Q5T1B1 145 aa7.72□□□□□ -1.17
SMARCE1-214ENST00000578112 ZNF664Q8N3J9 261 aa7.72□□□□□ -1.17
SMARCE1-214ENST00000578112 INAFM2P0DMQ5 153 aa7.71□□□□□ -1.17
SMARCE1-214ENST00000578112 CT45A10P0DMU9 189 aa7.71□□□□□ -1.17
SMARCE1-214ENST00000578112 HTN1P15515 57 aa7.71□□□□□ -1.17
SMARCE1-214ENST00000578112 SEC61GP60059 68 aa7.71□□□□□ -1.17
SMARCE1-214ENST00000578112 C11orf72Q8NBR9 251 aa7.71□□□□□ -1.17
SMARCE1-214ENST00000578112 VGLL1Q99990 258 aa7.71□□□□□ -1.17
SMARCE1-214ENST00000578112 CARHSP1Q9Y2V2 147 aaKnown RBP7.71□□□□□ -1.17
SMARCE1-214ENST00000578112 ZNF324O75467 553 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-214ENST00000578112 SLC38A11Q08AI6 406 aa7.71□□□□□ -1.18
SMARCE1-214ENST00000578112 VWC2Q2TAL6 325 aa7.71□□□□□ -1.18
SMARCE1-214ENST00000578112 LGALSLQ3ZCW2 172 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-214ENST00000578112 VSIG2Q96IQ7 327 aa7.71□□□□□ -1.18
SMARCE1-214ENST00000578112 SMCO4Q9NRQ5 59 aa7.71□□□□□ -1.18
SMARCE1-214ENST00000578112 A0A0J9YY99 117 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 PDE6DO43924 150 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 RPL29P47914 159 aaKnown RBP7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 OPCMLQ14982 345 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 OR10D4PQ8NGN7 298 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 FRZBQ92765 325 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 MGST2Q99735 147 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 LRP1BQ9NZR2 4599 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 TRGV2A0A075B6R0 118 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 MPDU1O75352 247 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 HIST1H1EP10412 219 aaKnown RBP7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 MRPL23Q16540 153 aaKnown RBP7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 OR4C5Q8NGB2 326 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 ASB13Q8WXK3 278 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 TMEM37Q8WXS4 190 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 ACTR3CQ9C0K3 210 aaPredicted RBP7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 PRO0255Q9UI72 69 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 TP53TG3Q9ULZ0 132 aa7.7□□□□□ -1.18
SMARCE1-214ENST00000578112 IFITM10A6NMD0 228 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 IAH1Q2TAA2 248 aaPredicted RBP7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 PRR27Q6MZM9 219 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 C9orf47Q6ZRZ4 202 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 SH2D6Q7Z4S9 175 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 NTN5Q8WTR8 489 aaPredicted RBP7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 WDR83OSQ9Y284 106 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 RCL1Q9Y2P8 373 aaKnown RBP7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 PRAC2D3DTV9 90 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 PHOX2AO14813 284 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 NXPH4O95158 308 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 INPP1P49441 399 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 JOSD1Q15040 202 aaPredicted RBP7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 RNASEKQ6P5S7 137 aaKnown RBP7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 Q6ZTI0 123 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 C10orf126Q8N4M7 172 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 HIST1H2BAQ96A08 127 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 SDHCQ99643 169 aaPredicted RBP7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 C1orf43Q9BWL3 253 aa7.69□□□□□ -1.18
SMARCE1-214ENST00000578112 FUT9Q9Y231 359 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms