RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 AAMDCQ9H7C9 122 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 BIN3Q9NQY0 253 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 ZFP30Q9Y2G7 519 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 X6R8D5 127 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 TRAV8-1A0A0A6YYK1 113 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 IGHV4-28A0A0C4DH34 117 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 A8MTW9 85 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 CT45A10P0DMU9 189 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 RPS10P46783 165 aaKnown RBP5.72□□□□□ -1.49
CCDC40-215ENST00000576033 FAM3BP58499 235 aaPredicted RBP5.72□□□□□ -1.49
CCDC40-215ENST00000576033 ERVFC1-1P60608 527 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 EBLN2Q6P2I7 272 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 Q6ZWC4 215 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 C1orf158Q8N1D5 194 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 NUDT10Q8NFP7 164 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 OR11H2Q8NH07 326 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 NUDT11Q96G61 164 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 VGLL1Q99990 258 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 RNASE7Q9H1E1 156 aaKnown RBP5.72□□□□□ -1.49
CCDC40-215ENST00000576033 PPP1R14DQ9NXH3 145 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 CELA1Q9UNI1 258 aa5.72□□□□□ -1.49
CCDC40-215ENST00000576033 A0A1W2PPQ1 181 aa5.71□□□□□ -1.5
CCDC40-215ENST00000576033 C5orf52A6NGY3 159 aa5.71□□□□□ -1.5
CCDC40-215ENST00000576033 K7EQM0 130 aa5.71□□□□□ -1.5
CCDC40-215ENST00000576033 CMC4P56277 68 aaPredicted RBP5.71□□□□□ -1.5
CCDC40-215ENST00000576033 IBA57Q5T440 356 aaKnown RBP5.71□□□□□ -1.5
CCDC40-215ENST00000576033 GFI1BQ5VTD9 330 aa5.71□□□□□ -1.5
CCDC40-215ENST00000576033 Q8NAQ8 132 aa5.71□□□□□ -1.5
CCDC40-215ENST00000576033 NHLRC2Q8NBF2 726 aa5.71□□□□□ -1.5
CCDC40-215ENST00000576033 SGK494Q96LW2 274 aa5.71□□□□□ -1.5
CCDC40-215ENST00000576033 PSG8Q9UQ74 426 aa5.71□□□□□ -1.5
CCDC40-215ENST00000576033 FAM231BA6NCW3 169 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 ZNF705GA8MUZ8 300 aaPredicted RBP5.7□□□□□ -1.5
CCDC40-215ENST00000576033 UBE2CO00762 179 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 HIST1H2BKO60814 126 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 TRGC2P03986 189 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 HIST1H2BJP06899 126 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 MGST1P10620 155 aaKnown RBP5.7□□□□□ -1.5
CCDC40-215ENST00000576033 HIST1H2BOP23527 126 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 HIST1H2BBP33778 126 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 CSN1S1P47710 185 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 HIST1H2BDP58876 126 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 HIST1H2BCP62807 126 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 HIST2H2BEQ16778 126 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 COA6Q5JTJ3 125 aaKnown RBP5.7□□□□□ -1.5
CCDC40-215ENST00000576033 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.7□□□□□ -1.5
CCDC40-215ENST00000576033 MORN3Q6PF18 240 aaPredicted RBP5.7□□□□□ -1.5
CCDC40-215ENST00000576033 TSKUQ8WUA8 353 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 HIST1H2BHQ93079 126 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 ZC2HC1AQ96GY0 325 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 WWC2-AS2Q96NR7 200 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 HIST1H2BNQ99877 126 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 HIST1H2BMQ99879 126 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 GFRA4Q9GZZ7 299 aa5.7□□□□□ -1.5
CCDC40-215ENST00000576033 VPS13DQ5THJ4 4388 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 GATCO43716 136 aaKnown RBP5.69□□□□□ -1.5
CCDC40-215ENST00000576033 AZU1P20160 251 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 CRIP1P50238 77 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 EMP1P54849 157 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 FOXA3P55318 350 aaPredicted RBP5.69□□□□□ -1.5
CCDC40-215ENST00000576033 NANOS2P60321 138 aaKnown RBP5.69□□□□□ -1.5
CCDC40-215ENST00000576033 COX19Q49B96 90 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 SAPCD1Q5SSQ6 148 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 SAMD13Q5VXD3 122 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 RASL11AQ6T310 242 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 C9orf47Q6ZRZ4 202 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 PRNTQ86SH4 94 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 ZFP82Q8N141 532 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 FRZBQ92765 325 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 AGPAT4-IT1Q9H0P7 198 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 RPP21Q9H633 154 aaKnown RBP5.69□□□□□ -1.5
CCDC40-215ENST00000576033 TP53TG1Q9Y2A0 90 aa5.69□□□□□ -1.5
CCDC40-215ENST00000576033 A0A1B0GXF2 115 aa5.68□□□□□ -1.5
CCDC40-215ENST00000576033 DUSP14O95147 198 aaKnown RBP5.68□□□□□ -1.5
CCDC40-215ENST00000576033 TRGC1P0CF51 173 aa5.68□□□□□ -1.5
CCDC40-215ENST00000576033 ZNF705AQ6ZN79 300 aaPredicted RBP5.68□□□□□ -1.5
CCDC40-215ENST00000576033 ATP5L2Q7Z4Y8 100 aa5.68□□□□□ -1.5
CCDC40-215ENST00000576033 OR10J6PQ8NGY7 276 aa5.68□□□□□ -1.5
CCDC40-215ENST00000576033 IL17DQ8TAD2 202 aa5.68□□□□□ -1.5
CCDC40-215ENST00000576033 MUC7Q8TAX7 377 aa5.68□□□□□ -1.5
CCDC40-215ENST00000576033 FAM19A4Q96LR4 140 aa5.68□□□□□ -1.5
CCDC40-215ENST00000576033 NEU1Q99519 415 aa5.68□□□□□ -1.5
CCDC40-215ENST00000576033 GNB1LQ9BYB4 327 aa5.68□□□□□ -1.5
CCDC40-215ENST00000576033 NAT8BQ9UHF3 227 aa5.68□□□□□ -1.5
CCDC40-215ENST00000576033 RYR3Q15413 4870 aa5.68□□□□□ -1.5
CCDC40-215ENST00000576033 TRAV12-3A0A0B4J271 114 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 TRBV7-9A0A0J9YWB2 115 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 PLAC8L1A1L4L8 177 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 A8MWL6 223 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 INSP01308 110 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 P01737 135 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 MT-ND6P03923 174 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 HTN1P15515 57 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 HOXA5P20719 270 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 PRR27Q6MZM9 219 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 TMEM136Q6ZRR5 245 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 ZNF575Q86XF7 245 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 ZFAND2AQ8N6M9 145 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 GATD1Q8NB37 220 aa5.67□□□□□ -1.5
CCDC40-215ENST00000576033 NUP35Q8NFH5 326 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms