RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 RPL7P18124 248 aaKnown RBP11.24□□□□□ -0.61
SCARF1-209ENST00000576012 FHL3Q13643 280 aa11.24□□□□□ -0.61
SCARF1-209ENST00000576012 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
SCARF1-209ENST00000576012 SCGB3A1Q96QR1 104 aa11.24□□□□□ -0.61
SCARF1-209ENST00000576012 SPATA25Q9BR10 227 aa11.24□□□□□ -0.61
SCARF1-209ENST00000576012 VCX2Q9H322 139 aa11.24□□□□□ -0.61
SCARF1-209ENST00000576012 IGKV3D-20A0A0C4DH25 116 aa11.24□□□□□ -0.61
SCARF1-209ENST00000576012 NDPQ00604 133 aa11.24□□□□□ -0.61
SCARF1-209ENST00000576012 ZMAT4Q9H898 229 aa11.24□□□□□ -0.61
SCARF1-209ENST00000576012 RAXQ9Y2V3 346 aa11.24□□□□□ -0.61
SCARF1-209ENST00000576012 ZNF815PA8K554 130 aa11.23□□□□□ -0.61
SCARF1-209ENST00000576012 MGPP08493 103 aa11.23□□□□□ -0.61
SCARF1-209ENST00000576012 FOXI1Q12951 378 aa11.23□□□□□ -0.61
SCARF1-209ENST00000576012 C8orf86Q6ZUL3 223 aa11.23□□□□□ -0.61
SCARF1-209ENST00000576012 IGHG4P01861 327 aa11.23□□□□□ -0.61
SCARF1-209ENST00000576012 SCGB1C2P0DMR2 95 aa11.23□□□□□ -0.61
SCARF1-209ENST00000576012 SLC25A16P16260 332 aa11.23□□□□□ -0.61
SCARF1-209ENST00000576012 XGP55808 180 aa11.23□□□□□ -0.61
SCARF1-209ENST00000576012 CREBBPQ92793 2442 aa11.23□□□□□ -0.61
SCARF1-209ENST00000576012 SMCPP49901 116 aaPredicted RBP11.22□□□□□ -0.61
SCARF1-209ENST00000576012 MORN3Q6PF18 240 aaPredicted RBP11.22□□□□□ -0.61
SCARF1-209ENST00000576012 Q8N8P6 123 aa11.22□□□□□ -0.61
SCARF1-209ENST00000576012 RNF183Q96D59 192 aa11.22□□□□□ -0.61
SCARF1-209ENST00000576012 RPL39LQ96EH5 51 aaKnown RBP11.22□□□□□ -0.61
SCARF1-209ENST00000576012 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
SCARF1-209ENST00000576012 FANCD2OSQ96PS1 177 aa11.22□□□□□ -0.61
SCARF1-209ENST00000576012 BSNQ9UPA5 3926 aa11.22□□□□□ -0.61
SCARF1-209ENST00000576012 TRBV6-1A0A0K0K1D8 114 aa11.22□□□□□ -0.61
SCARF1-209ENST00000576012 NBR2O15453 112 aa11.22□□□□□ -0.61
SCARF1-209ENST00000576012 CEACAM4O75871 244 aa11.22□□□□□ -0.61
SCARF1-209ENST00000576012 IGF1P05019 195 aa11.22□□□□□ -0.61
SCARF1-209ENST00000576012 ECSCRQ19T08 205 aa11.22□□□□□ -0.61
SCARF1-209ENST00000576012 PRO0461Q9UI25 63 aa11.22□□□□□ -0.61
SCARF1-209ENST00000576012 A0A087WX48 190 aa11.21□□□□□ -0.61
SCARF1-209ENST00000576012 MYMXA0A1B0GTQ4 84 aa11.21□□□□□ -0.61
SCARF1-209ENST00000576012 TMEM78Q5T7P6 136 aa11.21□□□□□ -0.61
SCARF1-209ENST00000576012 SMIM20Q8N5G0 67 aa11.21□□□□□ -0.61
SCARF1-209ENST00000576012 PRADC1Q9BSG0 188 aa11.21□□□□□ -0.61
SCARF1-209ENST00000576012 PRTN3P24158 256 aa11.21□□□□□ -0.62
SCARF1-209ENST00000576012 A0A0G2JNJ9 132 aa11.2□□□□□ -0.62
SCARF1-209ENST00000576012 PRSS29PA6NIE9 313 aa11.2□□□□□ -0.62
SCARF1-209ENST00000576012 THBDP07204 575 aa11.2□□□□□ -0.62
SCARF1-209ENST00000576012 Q9UFV3 132 aa11.2□□□□□ -0.62
SCARF1-209ENST00000576012 C14orf178Q8N769 122 aaPredicted RBP11.2□□□□□ -0.62
SCARF1-209ENST00000576012 AGPAT4-IT1Q9H0P7 198 aa11.2□□□□□ -0.62
SCARF1-209ENST00000576012 CDIP1Q9H305 208 aa11.2□□□□□ -0.62
SCARF1-209ENST00000576012 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.2□□□□□ -0.623e-6■□□□□ 10.1
SCARF1-209ENST00000576012 CUBNO60494 3623 aa11.2□□□□□ -0.62
SCARF1-209ENST00000576012 LGALS1P09382 135 aaKnown RBP11.2□□□□□ -0.62
SCARF1-209ENST00000576012 RAX2Q96IS3 184 aa11.2□□□□□ -0.62
SCARF1-209ENST00000576012 RAB1BQ9H0U4 201 aa11.2□□□□□ -0.62
SCARF1-209ENST00000576012 TRBV7-3A0A075B6L6 115 aa11.19□□□□□ -0.62
SCARF1-209ENST00000576012 E7EQL1 145 aa11.19□□□□□ -0.62
SCARF1-209ENST00000576012 F8W735 103 aaPredicted RBP11.19□□□□□ -0.62
SCARF1-209ENST00000576012 PDE6HQ13956 83 aa11.19□□□□□ -0.62
SCARF1-209ENST00000576012 SRSF1Q07955 248 aaKnown RBP eCLIP11.19□□□□□ -0.62
SCARF1-209ENST00000576012 IGHV3-64A0A075B6Q5 118 aa11.19□□□□□ -0.62
SCARF1-209ENST00000576012 FAM90A27PA6NNH2 459 aa11.19□□□□□ -0.62
SCARF1-209ENST00000576012 CTSGP08311 255 aa11.19□□□□□ -0.62
SCARF1-209ENST00000576012 ASCL5Q7RTU5 278 aa11.19□□□□□ -0.62
SCARF1-209ENST00000576012 NOTCH3Q9UM47 2321 aa11.18□□□□□ -0.62
SCARF1-209ENST00000576012 S100A4P26447 101 aaKnown RBP11.18□□□□□ -0.62
SCARF1-209ENST00000576012 PRR30Q53SZ7 412 aaPredicted RBP11.18□□□□□ -0.62
SCARF1-209ENST00000576012 DLX4Q92988 240 aaPredicted RBP11.18□□□□□ -0.62
SCARF1-209ENST00000576012 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
SCARF1-209ENST00000576012 CELSR1Q9NYQ6 3014 aa11.18□□□□□ -0.62
SCARF1-209ENST00000576012 H7C1H1 209 aa11.18□□□□□ -0.62
SCARF1-209ENST00000576012 IGLV2-18A0A075B6J9 118 aa11.17□□□□□ -0.62
SCARF1-209ENST00000576012 F8VRH5 84 aa11.17□□□□□ -0.62
SCARF1-209ENST00000576012 NBL1P41271 181 aa11.17□□□□□ -0.62
SCARF1-209ENST00000576012 NRACQ8N912 160 aa11.17□□□□□ -0.62
SCARF1-209ENST00000576012 NUP37Q8NFH4 326 aa11.17□□□□□ -0.62
SCARF1-209ENST00000576012 CITED2Q99967 270 aaPredicted RBP11.17□□□□□ -0.62
SCARF1-209ENST00000576012 BEX4Q9NWD9 120 aaPredicted RBP11.17□□□□□ -0.62
SCARF1-209ENST00000576012 LINC00527Q9UJ94 153 aa11.17□□□□□ -0.62
SCARF1-209ENST00000576012 SORL1Q92673 2214 aa11.17□□□□□ -0.62
SCARF1-209ENST00000576012 Q6ZUT4 128 aa11.17□□□□□ -0.62
SCARF1-209ENST00000576012 TRBV20-1A0A075B6N2 111 aa11.17□□□□□ -0.62
SCARF1-209ENST00000576012 M0QXV9 152 aa11.17□□□□□ -0.62
SCARF1-209ENST00000576012 TSPAN13O95857 204 aa11.17□□□□□ -0.62
SCARF1-209ENST00000576012 CLEC19AQ6UXS0 136 aa11.17□□□□□ -0.62
SCARF1-209ENST00000576012 B5MCH6 92 aa11.16□□□□□ -0.62
SCARF1-209ENST00000576012 PLNP26678 52 aa11.16□□□□□ -0.62
SCARF1-209ENST00000576012 LINC01560Q8TB33 94 aa11.16□□□□□ -0.62
SCARF1-209ENST00000576012 ANAPC13Q9BS18 74 aa11.16□□□□□ -0.62
SCARF1-209ENST00000576012 TNFRSF13BO14836 293 aaPredicted RBP11.16□□□□□ -0.62
SCARF1-209ENST00000576012 C15orf32Q32M92 178 aa11.16□□□□□ -0.62
SCARF1-209ENST00000576012 CFAP126Q5VTH2 177 aa11.16□□□□□ -0.62
SCARF1-209ENST00000576012 RPL11P62913 178 aaKnown RBP11.15□□□□□ -0.62
SCARF1-209ENST00000576012 CARD19Q96LW7 228 aa11.15□□□□□ -0.62
SCARF1-209ENST00000576012 DPM3Q9P2X0 92 aa11.15□□□□□ -0.62
SCARF1-209ENST00000576012 IGLV11-55A0A075B6I3 123 aa11.15□□□□□ -0.62
SCARF1-209ENST00000576012 TCL1BO95988 128 aa11.15□□□□□ -0.63
SCARF1-209ENST00000576012 TMEM170BQ5T4T1 132 aa11.14□□□□□ -0.63
SCARF1-209ENST00000576012 C2orf66Q6UXQ4 117 aa11.14□□□□□ -0.63
SCARF1-209ENST00000576012 Q6ZS46 218 aa11.14□□□□□ -0.63
SCARF1-209ENST00000576012 C8orf31Q8N9H6 132 aa11.14□□□□□ -0.63
SCARF1-209ENST00000576012 ZFHX3Q15911 3703 aa11.14□□□□□ -0.63
SCARF1-209ENST00000576012 SHISA9B4DS77 424 aa11.14□□□□□ -0.63
SCARF1-209ENST00000576012 RPL32P62910 135 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms