RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 AMN1Q8IY45 258 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 IGHV4OR15-8A0A075B7B6 117 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 A0A087WW49 117 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 D6R8Y8 96 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 F6UB75 175 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 CD5LO43866 347 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 COX11Q9Y6N1 276 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 BUB3O43684 328 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 NCR2O95944 276 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 CT83Q5H943 113 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 OR11H1Q8NG94 326 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 USMG5Q96IX5 58 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 ZFAND3Q9H8U3 227 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 PLP1P60201 277 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 KRTAP1-1Q07627 177 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 PSG3Q16557 428 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 OR10AG1Q8NH19 301 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 SMIM12Q96EX1 92 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 PRAC2D3DTV9 90 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 PCP4P48539 62 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 SIGLEC15Q6ZMC9 328 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 C18orf15Q96N68 181 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 AP1S3Q96PC3 154 aa10.65□□□□□ -0.7
TVP23A-207ENST00000573360 PRELID3AQ96N28 172 aa10.64□□□□□ -0.71
TVP23A-207ENST00000573360 GFRA4Q9GZZ7 299 aa10.64□□□□□ -0.71
TVP23A-207ENST00000573360 CKS2P33552 79 aa10.64□□□□□ -0.71
TVP23A-207ENST00000573360 VGLL1Q99990 258 aa10.64□□□□□ -0.71
TVP23A-207ENST00000573360 ST20Q9HBF5 79 aa10.64□□□□□ -0.71
TVP23A-207ENST00000573360 SMAD5-AS1Q9Y6J3 95 aa10.64□□□□□ -0.71
TVP23A-207ENST00000573360 CLPSL1A2RUU4 121 aa10.64□□□□□ -0.71
TVP23A-207ENST00000573360 NDFIP1Q9BT67 221 aa10.64□□□□□ -0.71
TVP23A-207ENST00000573360 FSHBP01225 129 aa10.63□□□□□ -0.71
TVP23A-207ENST00000573360 PSMB8P28062 276 aa10.63□□□□□ -0.71
TVP23A-207ENST00000573360 IGLV2-11P01706 119 aa10.63□□□□□ -0.71
TVP23A-207ENST00000573360 IGHG4P01861 327 aa10.63□□□□□ -0.71
TVP23A-207ENST00000573360 HOXD3P31249 432 aaPredicted RBP10.63□□□□□ -0.71
TVP23A-207ENST00000573360 UBE2V1Q13404 147 aa10.63□□□□□ -0.71
TVP23A-207ENST00000573360 ORAOV1Q8WV07 137 aa10.63□□□□□ -0.71
TVP23A-207ENST00000573360 ZNF688P0C7X2 276 aa10.63□□□□□ -0.71
TVP23A-207ENST00000573360 TMEM75Q8N9X5 138 aa10.63□□□□□ -0.71
TVP23A-207ENST00000573360 NAA38Q9BRA0 125 aaKnown RBP10.63□□□□□ -0.71
TVP23A-207ENST00000573360 SH2D1AO60880 128 aa10.62□□□□□ -0.71
TVP23A-207ENST00000573360 PET117Q6UWS5 81 aa10.62□□□□□ -0.71
TVP23A-207ENST00000573360 TMEM14CQ9P0S9 112 aa10.62□□□□□ -0.71
TVP23A-207ENST00000573360 AGRNO00468 2067 aa10.62□□□□□ -0.71
TVP23A-207ENST00000573360 IGLV1-40P01703 118 aa10.62□□□□□ -0.71
TVP23A-207ENST00000573360 NMUP48645 174 aa10.62□□□□□ -0.71
TVP23A-207ENST00000573360 CRIP1P50238 77 aa10.62□□□□□ -0.71
TVP23A-207ENST00000573360 CACNG7P62955 275 aa10.62□□□□□ -0.71
TVP23A-207ENST00000573360 HIST1H1AQ02539 215 aaPredicted RBP10.62□□□□□ -0.71
TVP23A-207ENST00000573360 DAZ1Q9NQZ3 744 aaKnown RBP10.62□□□□□ -0.71
TVP23A-207ENST00000573360 CD28P10747 220 aa10.61□□□□□ -0.71
TVP23A-207ENST00000573360 HTN1P15515 57 aa10.61□□□□□ -0.71
TVP23A-207ENST00000573360 C12orf54Q6X4T0 127 aa10.61□□□□□ -0.71
TVP23A-207ENST00000573360 AMMECR1LQ6DCA0 310 aa10.61□□□□□ -0.71
TVP23A-207ENST00000573360 RNASE8Q8TDE3 154 aaKnown RBP10.61□□□□□ -0.71
TVP23A-207ENST00000573360 FAM231BA6NCW3 169 aa10.61□□□□□ -0.71
TVP23A-207ENST00000573360 CITED2Q99967 270 aaPredicted RBP10.61□□□□□ -0.71
TVP23A-207ENST00000573360 STAB1Q9NY15 2570 aa10.6□□□□□ -0.71
TVP23A-207ENST00000573360 RAB37Q96AX2 223 aa10.6□□□□□ -0.71
TVP23A-207ENST00000573360 ORMDL3Q8N138 153 aa10.6□□□□□ -0.71
TVP23A-207ENST00000573360 SPRY2O43597 315 aa10.6□□□□□ -0.71
TVP23A-207ENST00000573360 VPS25Q9BRG1 176 aa10.6□□□□□ -0.71
TVP23A-207ENST00000573360 NDUFA4O00483 81 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 EVI2AP22794 236 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 C19orf54Q5BKX5 351 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 COL6A5A8TX70 2615 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 FER1L6-AS1Q8NA97 138 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 ZNF747Q9BV97 191 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 PPP1R14DQ9NXH3 145 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 SIGLEC8Q9NYZ4 499 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 PRSS1P07477 247 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 S100A7P31151 101 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 PSG9Q00887 426 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 BVES-AS1Q5T3Y7 98 aa10.59□□□□□ -0.71
TVP23A-207ENST00000573360 NPIPB6E9PJ23 425 aa10.58□□□□□ -0.72
TVP23A-207ENST00000573360 TCTEX1D4Q5JR98 221 aa10.58□□□□□ -0.72
TVP23A-207ENST00000573360 C9orf139Q6ZV77 190 aa10.58□□□□□ -0.72
TVP23A-207ENST00000573360 TEX29Q8N6K0 151 aa10.58□□□□□ -0.72
TVP23A-207ENST00000573360 TMEM190Q8WZ59 177 aa10.58□□□□□ -0.72
TVP23A-207ENST00000573360 MSRB1Q9NZV6 116 aa10.58□□□□□ -0.72
TVP23A-207ENST00000573360 PSMG4Q5JS54 123 aa10.58□□□□□ -0.72
TVP23A-207ENST00000573360 DYNLRB2Q8TF09 96 aa10.58□□□□□ -0.72
TVP23A-207ENST00000573360 Q6ZQT7 251 aa10.57□□□□□ -0.72
TVP23A-207ENST00000573360 LINC01006Q8NI28 216 aa10.57□□□□□ -0.72
TVP23A-207ENST00000573360 UFC1Q9Y3C8 167 aa10.57□□□□□ -0.72
TVP23A-207ENST00000573360 AKAP9Q99996 3911 aa10.57□□□□□ -0.72
TVP23A-207ENST00000573360 TENM1Q9UKZ4 2725 aa10.57□□□□□ -0.72
TVP23A-207ENST00000573360 ELANEP08246 267 aa10.57□□□□□ -0.72
TVP23A-207ENST00000573360 MRPS12O15235 138 aaKnown RBP10.57□□□□□ -0.72
TVP23A-207ENST00000573360 LGALS1P09382 135 aaKnown RBP10.57□□□□□ -0.72
TVP23A-207ENST00000573360 MRPL51Q4U2R6 128 aaKnown RBP10.57□□□□□ -0.72
TVP23A-207ENST00000573360 SAPCD1Q5SSQ6 148 aa10.57□□□□□ -0.72
TVP23A-207ENST00000573360 TMEM78Q5T7P6 136 aa10.57□□□□□ -0.72
TVP23A-207ENST00000573360 OR1N2Q8NGR9 330 aa10.57□□□□□ -0.72
TVP23A-207ENST00000573360 IGHV7-4-1A0A0J9YVY3 117 aa10.56□□□□□ -0.72
TVP23A-207ENST00000573360 FAM104BQ5XKR9 115 aa10.56□□□□□ -0.72
TVP23A-207ENST00000573360 LYPD1Q8N2G4 141 aa10.56□□□□□ -0.72
TVP23A-207ENST00000573360 NPYP01303 97 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms