RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 GNRH2O43555 120 aa11.19□□□□□ -0.62
NDE1-205ENST00000572756 TYMSP04818 313 aa11.19□□□□□ -0.62
NDE1-205ENST00000572756 SEC11BP0C7V7 166 aa11.19□□□□□ -0.62
NDE1-205ENST00000572756 FHITP49789 147 aa11.19□□□□□ -0.62
NDE1-205ENST00000572756 UBE2G2P60604 165 aa11.19□□□□□ -0.62
NDE1-205ENST00000572756 MAP1LC3BQ9GZQ8 125 aa11.19□□□□□ -0.62
NDE1-205ENST00000572756 C11orf21Q9P2W6 132 aa11.19□□□□□ -0.62
NDE1-205ENST00000572756 IGHV3-53P01767 116 aa11.18□□□□□ -0.62
NDE1-205ENST00000572756 FHL2Q14192 279 aa11.18□□□□□ -0.62
NDE1-205ENST00000572756 PRNTQ86SH4 94 aa11.18□□□□□ -0.62
NDE1-205ENST00000572756 LINC00479Q96M42 142 aa11.18□□□□□ -0.62
NDE1-205ENST00000572756 NKX6-2Q9C056 277 aaPredicted RBP11.18□□□□□ -0.62
NDE1-205ENST00000572756 SDF2L1Q9HCN8 221 aa11.18□□□□□ -0.62
NDE1-205ENST00000572756 PEX7O00628 323 aa11.17□□□□□ -0.62
NDE1-205ENST00000572756 GCGP01275 180 aa11.17□□□□□ -0.62
NDE1-205ENST00000572756 ESRGQ1W209 222 aa11.17□□□□□ -0.62
NDE1-205ENST00000572756 SMUG1Q53HV7 270 aa11.17□□□□□ -0.62
NDE1-205ENST00000572756 KCNS1Q96KK3 526 aa11.17□□□□□ -0.62
NDE1-205ENST00000572756 TRAV34A0A0B4J273 112 aa11.16□□□□□ -0.62
NDE1-205ENST00000572756 KANTRA0A1W2PQU2 76 aa11.16□□□□□ -0.62
NDE1-205ENST00000572756 UMAD1C9J7I0 102 aa11.16□□□□□ -0.62
NDE1-205ENST00000572756 M0R2P5 195 aa11.16□□□□□ -0.62
NDE1-205ENST00000572756 IFNA7P01567 189 aa11.16□□□□□ -0.62
NDE1-205ENST00000572756 PFN1P07737 140 aaKnown RBP11.16□□□□□ -0.62
NDE1-205ENST00000572756 CRYBA4P53673 196 aa11.16□□□□□ -0.62
NDE1-205ENST00000572756 SAPCD1Q5SSQ6 148 aa11.16□□□□□ -0.62
NDE1-205ENST00000572756 HIST1H2BAQ96A08 127 aa11.16□□□□□ -0.62
NDE1-205ENST00000572756 UPK3BQ9BT76 320 aa11.16□□□□□ -0.62
NDE1-205ENST00000572756 ZNF471Q9BX82 626 aaPredicted RBP11.16□□□□□ -0.62
NDE1-205ENST00000572756 PRO0255Q9UI72 69 aa11.16□□□□□ -0.62
NDE1-205ENST00000572756 NBDYA0A0U1RRE5 68 aa11.15□□□□□ -0.62
NDE1-205ENST00000572756 A0A1B0GVY2 172 aa11.15□□□□□ -0.62
NDE1-205ENST00000572756 PAX4O43316 350 aa11.15□□□□□ -0.62
NDE1-205ENST00000572756 SFTA3P0C7M3 94 aa11.15□□□□□ -0.62
NDE1-205ENST00000572756 SLAQ13239 276 aa11.15□□□□□ -0.62
NDE1-205ENST00000572756 ZFP69Q49AA0 526 aa11.15□□□□□ -0.62
NDE1-205ENST00000572756 TMUB2Q71RG4 321 aa11.15□□□□□ -0.62
NDE1-205ENST00000572756 STOML3Q8TAV4 291 aa11.15□□□□□ -0.62
NDE1-205ENST00000572756 MBD3L1Q8WWY6 194 aa11.15□□□□□ -0.62
NDE1-205ENST00000572756 ZNF479Q96JC4 524 aa11.15□□□□□ -0.62
NDE1-205ENST00000572756 MRPS16Q9Y3D3 137 aaKnown RBP11.15□□□□□ -0.62
NDE1-205ENST00000572756 ARL2-SNX15V9GYD0 113 aa11.15□□□□□ -0.62
NDE1-205ENST00000572756 TRAV4A0A0B4J268 109 aa11.14□□□□□ -0.63
NDE1-205ENST00000572756 PPT1P50897 306 aa11.14□□□□□ -0.63
NDE1-205ENST00000572756 Q86TA4 180 aa11.14□□□□□ -0.63
NDE1-205ENST00000572756 HHLA3Q9XRX5 114 aa11.14□□□□□ -0.63
NDE1-205ENST00000572756 PKD1P98161 4303 aa11.14□□□□□ -0.63
NDE1-205ENST00000572756 PKHD1P08F94 4074 aa11.14□□□□□ -0.63
NDE1-205ENST00000572756 PRSS29PA6NIE9 313 aa11.13□□□□□ -0.63
NDE1-205ENST00000572756 C1orf134Q5TEV5 83 aa11.13□□□□□ -0.63
NDE1-205ENST00000572756 DPPA3Q6W0C5 159 aa11.13□□□□□ -0.63
NDE1-205ENST00000572756 Q6ZNX1 250 aa11.13□□□□□ -0.63
NDE1-205ENST00000572756 COX8CQ7Z4L0 72 aa11.13□□□□□ -0.63
NDE1-205ENST00000572756 TCTE3Q8IZS6 198 aa11.13□□□□□ -0.63
NDE1-205ENST00000572756 FAM213BQ8TBF2 198 aa11.13□□□□□ -0.63
NDE1-205ENST00000572756 C9orf85Q96MD7 179 aa11.13□□□□□ -0.63
NDE1-205ENST00000572756 TCEAL7Q9BRU2 100 aa11.13□□□□□ -0.63
NDE1-205ENST00000572756 Q9H8V8 135 aa11.13□□□□□ -0.63
NDE1-205ENST00000572756 ICOSQ9Y6W8 199 aa11.13□□□□□ -0.63
NDE1-205ENST00000572756 TRGV4A0A0C4DH28 118 aa11.12□□□□□ -0.63
NDE1-205ENST00000572756 EIF5AP63241 154 aaKnown RBP11.12□□□□□ -0.63
NDE1-205ENST00000572756 SFT2D1Q8WV19 159 aa11.12□□□□□ -0.63
NDE1-205ENST00000572756 IGKV3D-20A0A0C4DH25 116 aa11.11□□□□□ -0.63
NDE1-205ENST00000572756 TRBV6-1A0A0K0K1D8 114 aa11.11□□□□□ -0.63
NDE1-205ENST00000572756 PFDN1O60925 122 aa11.11□□□□□ -0.63
NDE1-205ENST00000572756 RNASE3P12724 160 aaKnown RBP11.11□□□□□ -0.63
NDE1-205ENST00000572756 TPT1P13693 172 aaKnown RBP11.11□□□□□ -0.63
NDE1-205ENST00000572756 LGALSLQ3ZCW2 172 aaPredicted RBP11.11□□□□□ -0.63
NDE1-205ENST00000572756 SOHLH1Q5JUK2 328 aa11.11□□□□□ -0.63
NDE1-205ENST00000572756 FMC1Q96HJ9 113 aa11.11□□□□□ -0.63
NDE1-205ENST00000572756 KRTAP1-5Q9BYS1 174 aa11.11□□□□□ -0.63
NDE1-205ENST00000572756 FABP5P3A8MUU1 101 aa11.1□□□□□ -0.63
NDE1-205ENST00000572756 PAGE4O60829 102 aa11.1□□□□□ -0.63
NDE1-205ENST00000572756 CRIP1P50238 77 aa11.1□□□□□ -0.63
NDE1-205ENST00000572756 MRPL23Q16540 153 aaKnown RBP11.1□□□□□ -0.63
NDE1-205ENST00000572756 CST9LP1Q5W188 147 aa11.1□□□□□ -0.63
NDE1-205ENST00000572756 OR4C5Q8NGB2 326 aa11.1□□□□□ -0.63
NDE1-205ENST00000572756 PTH2Q96A98 100 aa11.1□□□□□ -0.63
NDE1-205ENST00000572756 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
NDE1-205ENST00000572756 ZFP30Q9Y2G7 519 aa11.1□□□□□ -0.63
NDE1-205ENST00000572756 K7EQD1 137 aa11.09□□□□□ -0.63
NDE1-205ENST00000572756 ZNF876PQ49A33 203 aa11.09□□□□□ -0.63
NDE1-205ENST00000572756 C6orf223Q8N319 242 aa11.09□□□□□ -0.63
NDE1-205ENST00000572756 A0A1B0GV50 99 aa11.08□□□□□ -0.64
NDE1-205ENST00000572756 PGPEP1LA6NFU8 196 aa11.08□□□□□ -0.64
NDE1-205ENST00000572756 C9JCJ5 164 aa11.08□□□□□ -0.64
NDE1-205ENST00000572756 LTAP01374 205 aa11.08□□□□□ -0.64
NDE1-205ENST00000572756 C1QBP02746 253 aa11.08□□□□□ -0.64
NDE1-205ENST00000572756 H2AFB1P0C5Y9 115 aa11.08□□□□□ -0.64
NDE1-205ENST00000572756 GATA1P15976 413 aaPredicted RBP11.08□□□□□ -0.64
NDE1-205ENST00000572756 TTC32Q5I0X7 151 aa11.08□□□□□ -0.64
NDE1-205ENST00000572756 A0A1W2PPQ1 181 aa11.07□□□□□ -0.64
NDE1-205ENST00000572756 RS1O15537 224 aa11.07□□□□□ -0.64
NDE1-205ENST00000572756 ORM1P02763 201 aa11.07□□□□□ -0.64
NDE1-205ENST00000572756 GYPEP15421 78 aa11.07□□□□□ -0.64
NDE1-205ENST00000572756 UBE2G1P62253 170 aa11.07□□□□□ -0.64
NDE1-205ENST00000572756 ZNF506Q5JVG8 444 aa11.07□□□□□ -0.64
NDE1-205ENST00000572756 CFAP126Q5VTH2 177 aa11.07□□□□□ -0.64
NDE1-205ENST00000572756 LYPD5Q6UWN5 251 aa11.07□□□□□ -0.64
NDE1-205ENST00000572756 NEGR1Q7Z3B1 354 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms