RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 SMUG1Q53HV7 270 aa11.19□□□□□ -0.62
CHD3-215ENST00000572750 FAM159AQ6UWV7 190 aa11.19□□□□□ -0.62
CHD3-215ENST00000572750 TMEM183AQ8IXX5 376 aa11.19□□□□□ -0.62
CHD3-215ENST00000572750 FMC1Q96HJ9 113 aa11.19□□□□□ -0.62
CHD3-215ENST00000572750 KLF12Q9Y4X4 402 aa11.19□□□□□ -0.62
CHD3-215ENST00000572750 IGHV4-4A0A075B6R2 117 aa11.18□□□□□ -0.62
CHD3-215ENST00000572750 ZNF415Q09FC8 603 aa11.18□□□□□ -0.62
CHD3-215ENST00000572750 DAZ2Q13117 558 aaKnown RBP11.18□□□□□ -0.62
CHD3-215ENST00000572750 SAPCD1Q5SSQ6 148 aa11.18□□□□□ -0.62
CHD3-215ENST00000572750 IBA57Q5T440 356 aaKnown RBP11.18□□□□□ -0.62
CHD3-215ENST00000572750 Q6ZTI0 123 aa11.18□□□□□ -0.62
CHD3-215ENST00000572750 MDFICQ9P1T7 246 aa11.18□□□□□ -0.62
CHD3-215ENST00000572750 C11orf21Q9P2W6 132 aa11.18□□□□□ -0.62
CHD3-215ENST00000572750 TRGV11A0A075B6L2 103 aa11.17□□□□□ -0.62
CHD3-215ENST00000572750 PFN1P07737 140 aaKnown RBP11.17□□□□□ -0.62
CHD3-215ENST00000572750 TDRG1Q3Y452 100 aa11.17□□□□□ -0.62
CHD3-215ENST00000572750 LINC00612Q8N6U2 182 aa11.17□□□□□ -0.62
CHD3-215ENST00000572750 ZC2HC1AQ96GY0 325 aa11.17□□□□□ -0.62
CHD3-215ENST00000572750 TRGV1A0A0A0MS02 117 aa11.16□□□□□ -0.62
CHD3-215ENST00000572750 LTAP01374 205 aa11.16□□□□□ -0.62
CHD3-215ENST00000572750 IFNA1P01562 189 aa11.16□□□□□ -0.62
CHD3-215ENST00000572750 TYMSP04818 313 aa11.16□□□□□ -0.62
CHD3-215ENST00000572750 BCL2P10415 239 aa11.16□□□□□ -0.62
CHD3-215ENST00000572750 NHLRC2Q8NBF2 726 aa11.16□□□□□ -0.62
CHD3-215ENST00000572750 LINC00476Q8WZB0 136 aa11.16□□□□□ -0.62
CHD3-215ENST00000572750 SDF2L1Q9HCN8 221 aa11.16□□□□□ -0.62
CHD3-215ENST00000572750 MRPL16Q9NX20 251 aaKnown RBP11.16□□□□□ -0.62
CHD3-215ENST00000572750 VPS13DQ5THJ4 4388 aa11.15□□□□□ -0.62
CHD3-215ENST00000572750 TRBV6-1A0A0K0K1D8 114 aa11.15□□□□□ -0.62
CHD3-215ENST00000572750 GNRH2O43555 120 aa11.15□□□□□ -0.62
CHD3-215ENST00000572750 SPINK4O60575 86 aa11.15□□□□□ -0.62
CHD3-215ENST00000572750 ATP5G1P05496 136 aa11.15□□□□□ -0.62
CHD3-215ENST00000572750 DERL1Q9BUN8 251 aa11.15□□□□□ -0.62
CHD3-215ENST00000572750 APLNQ9ULZ1 77 aa11.15□□□□□ -0.62
CHD3-215ENST00000572750 IGHV3-16A0A0C4DH30 117 aa11.14□□□□□ -0.63
CHD3-215ENST00000572750 F5H768 121 aa11.14□□□□□ -0.63
CHD3-215ENST00000572750 MEF2BQ02080 365 aaPredicted RBP11.14□□□□□ -0.63
CHD3-215ENST00000572750 TMEM88Q6PEY1 159 aa11.14□□□□□ -0.63
CHD3-215ENST00000572750 C11orf52Q96A22 123 aa11.14□□□□□ -0.63
CHD3-215ENST00000572750 ZFP30Q9Y2G7 519 aa11.14□□□□□ -0.63
CHD3-215ENST00000572750 TRGV2A0A075B6R0 118 aa11.13□□□□□ -0.63
CHD3-215ENST00000572750 SH2D1AO60880 128 aa11.13□□□□□ -0.63
CHD3-215ENST00000572750 LY6G6CO95867 125 aa11.13□□□□□ -0.63
CHD3-215ENST00000572750 RPL35P42766 123 aaKnown RBP11.13□□□□□ -0.63
CHD3-215ENST00000572750 BLOC1S1P78537 153 aa11.13□□□□□ -0.63
CHD3-215ENST00000572750 KCNS1Q96KK3 526 aa11.13□□□□□ -0.63
CHD3-215ENST00000572750 NDUFAF3Q9BU61 184 aa11.13□□□□□ -0.63
CHD3-215ENST00000572750 CRIP1P50238 77 aa11.12□□□□□ -0.63
CHD3-215ENST00000572750 TCTAP57738 103 aa11.12□□□□□ -0.63
CHD3-215ENST00000572750 COX8CQ7Z4L0 72 aa11.12□□□□□ -0.63
CHD3-215ENST00000572750 DNAH6Q9C0G6 4158 aa11.11□□□□□ -0.63
CHD3-215ENST00000572750 IGKV3D-20A0A0C4DH25 116 aa11.11□□□□□ -0.63
CHD3-215ENST00000572750 S100A9P06702 114 aaKnown RBP11.11□□□□□ -0.63
CHD3-215ENST00000572750 HOXA5P20719 270 aa11.11□□□□□ -0.63
CHD3-215ENST00000572750 LGALS9BQ3B8N2 356 aa11.11□□□□□ -0.63
CHD3-215ENST00000572750 FAM162BQ5T6X4 162 aa11.11□□□□□ -0.63
CHD3-215ENST00000572750 TXNDC17Q9BRA2 123 aa11.11□□□□□ -0.63
CHD3-215ENST00000572750 VAX2Q9UIW0 290 aa11.11□□□□□ -0.63
CHD3-215ENST00000572750 FABP5P3A8MUU1 101 aa11.1□□□□□ -0.63
CHD3-215ENST00000572750 M0R036 132 aa11.1□□□□□ -0.63
CHD3-215ENST00000572750 PDE6DO43924 150 aa11.1□□□□□ -0.63
CHD3-215ENST00000572750 IGHV3-53P01767 116 aa11.1□□□□□ -0.63
CHD3-215ENST00000572750 CENPWQ5EE01 88 aa11.1□□□□□ -0.63
CHD3-215ENST00000572750 LYPD6BQ8NI32 183 aa11.1□□□□□ -0.63
CHD3-215ENST00000572750 FAM210BQ96KR6 192 aa11.1□□□□□ -0.63
CHD3-215ENST00000572750 B4DEV8 164 aa11.09□□□□□ -0.63
CHD3-215ENST00000572750 ORM1P02763 201 aa11.09□□□□□ -0.63
CHD3-215ENST00000572750 OR5I1Q13606 314 aa11.09□□□□□ -0.63
CHD3-215ENST00000572750 ZNF674Q2M3X9 581 aa11.09□□□□□ -0.63
CHD3-215ENST00000572750 BAGE2Q86Y30 109 aa11.09□□□□□ -0.63
CHD3-215ENST00000572750 PCNPQ8WW12 178 aaKnown RBP11.09□□□□□ -0.63
CHD3-215ENST00000572750 C18orf15Q96N68 181 aa11.09□□□□□ -0.63
CHD3-215ENST00000572750 SPXQ9BT56 116 aa11.09□□□□□ -0.63
CHD3-215ENST00000572750 MLST8Q9BVC4 326 aa11.09□□□□□ -0.63
CHD3-215ENST00000572750 MUC4Q99102 2169 aa11.09□□□□□ -0.63
CHD3-215ENST00000572750 PKHD1P08F94 4074 aa11.08□□□□□ -0.64
CHD3-215ENST00000572750 RNASE3P12724 160 aaKnown RBP11.08□□□□□ -0.64
CHD3-215ENST00000572750 TAGLN2P37802 199 aaKnown RBP11.08□□□□□ -0.64
CHD3-215ENST00000572750 LGALS9CQ6DKI2 356 aa11.08□□□□□ -0.64
CHD3-215ENST00000572750 PRR27Q6MZM9 219 aa11.08□□□□□ -0.64
CHD3-215ENST00000572750 TEX261Q6UWH6 196 aa11.08□□□□□ -0.64
CHD3-215ENST00000572750 MED9Q9NWA0 146 aa11.08□□□□□ -0.64
CHD3-215ENST00000572750 TRAV26-1A0A087WT03 109 aa11.07□□□□□ -0.64
CHD3-215ENST00000572750 TMSB15BA0A087X1C1 80 aa11.07□□□□□ -0.64
CHD3-215ENST00000572750 A0A0J9YY99 117 aa11.07□□□□□ -0.64
CHD3-215ENST00000572750 RAB19A4D1S5 217 aa11.07□□□□□ -0.64
CHD3-215ENST00000572750 KRBOX1C9JBD0 128 aa11.07□□□□□ -0.64
CHD3-215ENST00000572750 M0R2P5 195 aa11.07□□□□□ -0.64
CHD3-215ENST00000572750 TOR2AQ5JU69 321 aa11.07□□□□□ -0.64
CHD3-215ENST00000572750 RASL10AQ92737 203 aa11.07□□□□□ -0.64
CHD3-215ENST00000572750 C9orf85Q96MD7 179 aa11.07□□□□□ -0.64
CHD3-215ENST00000572750 NACAE9PAV3 2078 aa11.06□□□□□ -0.64
CHD3-215ENST00000572750 TRBV20OR9-2A0A075B6H5 130 aa11.06□□□□□ -0.64
CHD3-215ENST00000572750 RBFOX3A6NFN3 312 aa11.06□□□□□ -0.64
CHD3-215ENST00000572750 C9JCJ5 164 aa11.06□□□□□ -0.64
CHD3-215ENST00000572750 H3BVH4 76 aa11.06□□□□□ -0.64
CHD3-215ENST00000572750 NUDT3O95989 172 aa11.06□□□□□ -0.64
CHD3-215ENST00000572750 SFTA3P0C7M3 94 aa11.06□□□□□ -0.64
CHD3-215ENST00000572750 ASIPP42127 132 aa11.06□□□□□ -0.64
CHD3-215ENST00000572750 GNG4P50150 75 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms