RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 BRWD1-AS2P59051 145 aa6.91□□□□□ -1.3
TVP23A-205ENST00000572428 ZNRF1Q8ND25 227 aa6.91□□□□□ -1.3
TVP23A-205ENST00000572428 PPDPFLQ8WWR9 84 aa6.91□□□□□ -1.3
TVP23A-205ENST00000572428 CCL17Q92583 94 aa6.91□□□□□ -1.3
TVP23A-205ENST00000572428 DCTN5Q9BTE1 182 aa6.91□□□□□ -1.3
TVP23A-205ENST00000572428 TIMM9Q9Y5J7 89 aa6.91□□□□□ -1.3
TVP23A-205ENST00000572428 CHD6Q8TD26 2715 aa6.91□□□□□ -1.3
TVP23A-205ENST00000572428 RNF223E7ERA6 249 aa6.9□□□□□ -1.3
TVP23A-205ENST00000572428 CD7P09564 240 aa6.9□□□□□ -1.3
TVP23A-205ENST00000572428 PAPPA-AS1Q5QFB9 102 aa6.9□□□□□ -1.3
TVP23A-205ENST00000572428 ASPHD1Q5U4P2 390 aa6.9□□□□□ -1.3
TVP23A-205ENST00000572428 TACC2O95359 2948 aa6.9□□□□□ -1.3
TVP23A-205ENST00000572428 LINC00473A8K010 186 aa6.9□□□□□ -1.31
TVP23A-205ENST00000572428 ZNF324O75467 553 aaPredicted RBP6.9□□□□□ -1.31
TVP23A-205ENST00000572428 GYPAP02724 150 aa6.9□□□□□ -1.31
TVP23A-205ENST00000572428 PIP4P2Q8N4L2 257 aa6.9□□□□□ -1.31
TVP23A-205ENST00000572428 Q6ZRU5 148 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 KCNS1Q96KK3 526 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 LINC00479Q96M42 142 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 CCL19Q99731 98 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 CTSZQ9UBR2 303 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 BUB3O43684 328 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 DEFA4P12838 97 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 ERVK-16P61578 105 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 C17orf58Q2M2W7 97 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 AGPAT4-IT1Q9H0P7 198 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 GNG13Q9P2W3 67 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 LINC01548A6NM66 108 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 TCL1BO95988 128 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 IGHV4-39P01824 125 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 ARL16Q0P5N6 197 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 LY6G5BQ8NDX9 201 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 S1PR3Q99500 378 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 CCL13Q99616 98 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 SHANK2-AS3Q9BTD1 123 aa6.89□□□□□ -1.31
TVP23A-205ENST00000572428 PROP1O75360 226 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 INAFM2P0DMQ5 153 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 EBI3Q14213 229 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 RRN3P1Q2M238 152 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 LYPD2Q6UXB3 125 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 DCHS2Q6V1P9 2916 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 BPIFA4PQ86YQ2 179 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 FAM216BQ8N7L0 139 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 TAF15Q92804 592 aaKnown RBP eCLIP6.88□□□□□ -1.31
TVP23A-205ENST00000572428 ARL2-SNX15V9GYD0 113 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 TENM4Q6N022 2769 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 E9PLD3 99 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 LRBAP50851 2863 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 hADV29S1A0JD25 119 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 A1L4Q6 167 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 CEBPZOSA8MTT3 80 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 LYNX1G3V0Z9 82 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 LYNX1P0DP58 116 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 EBLN2Q6P2I7 272 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 TEPPQ6URK8 271 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 FAM19A2Q8N3H0 131 aa6.88□□□□□ -1.31
TVP23A-205ENST00000572428 MRPL20Q9BYC9 149 aaKnown RBP6.88□□□□□ -1.31
TVP23A-205ENST00000572428 TRACP01848 142 aa6.87□□□□□ -1.31
TVP23A-205ENST00000572428 CFAP126Q5VTH2 177 aa6.87□□□□□ -1.31
TVP23A-205ENST00000572428 NEXN-AS1Q8NBZ9 246 aa6.87□□□□□ -1.31
TVP23A-205ENST00000572428 OR8B2Q96RD0 313 aa6.87□□□□□ -1.31
TVP23A-205ENST00000572428 GNB4Q9HAV0 340 aa6.87□□□□□ -1.31
TVP23A-205ENST00000572428 PMS2P5A8MQ11 134 aa6.87□□□□□ -1.31
TVP23A-205ENST00000572428 NDUFB3O43676 98 aa6.87□□□□□ -1.31
TVP23A-205ENST00000572428 ASIPP42127 132 aa6.87□□□□□ -1.31
TVP23A-205ENST00000572428 UBE2G1P62253 170 aa6.87□□□□□ -1.31
TVP23A-205ENST00000572428 LEAP2Q969E1 77 aa6.87□□□□□ -1.31
TVP23A-205ENST00000572428 PLAC8L1A1L4L8 177 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 NDUFS7O75251 213 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 LY6HO94772 140 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 DSCR9P59020 149 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 LINC00528Q8N1L1 170 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 PHLDA1Q8WV24 401 aaPredicted RBP6.86□□□□□ -1.31
TVP23A-205ENST00000572428 ZNF256Q9Y2P7 627 aaPredicted RBP6.86□□□□□ -1.31
TVP23A-205ENST00000572428 SMIM13P0DJ93 91 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 LOXL1Q08397 574 aaPredicted RBP6.86□□□□□ -1.31
TVP23A-205ENST00000572428 SS18Q15532 418 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 RPL39P5Q59GN2 51 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 POM121L12Q8N7R1 296 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 CLDND2Q8NHS1 167 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 UBE2L5PA0A1B0GUS4 154 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 EPM2AB3EWF7 344 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 SMKR1H3BMG3 65 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 HLA-DRB4P13762 266 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 PSMB8P28062 276 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 CEMP1Q6PRD7 247 aaPredicted RBP6.86□□□□□ -1.31
TVP23A-205ENST00000572428 RABAC1Q9UI14 185 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 HLA-DRB4X5D2U9 266 aa6.86□□□□□ -1.31
TVP23A-205ENST00000572428 A8MWV9 139 aa6.85□□□□□ -1.31
TVP23A-205ENST00000572428 F5H697 171 aa6.85□□□□□ -1.31
TVP23A-205ENST00000572428 K7ERJ3 54 aa6.85□□□□□ -1.31
TVP23A-205ENST00000572428 OR5AL1P0C617 328 aa6.85□□□□□ -1.31
TVP23A-205ENST00000572428 SAA2P0DJI9 122 aaPredicted RBP6.85□□□□□ -1.31
TVP23A-205ENST00000572428 TMEM136Q6ZRR5 245 aa6.85□□□□□ -1.31
TVP23A-205ENST00000572428 DCANP1Q8TF63 244 aa6.85□□□□□ -1.31
TVP23A-205ENST00000572428 HIGD1BQ9P298 99 aa6.85□□□□□ -1.31
TVP23A-205ENST00000572428 COX8AP10176 69 aa6.85□□□□□ -1.31
TVP23A-205ENST00000572428 RTL8BQ17RB0 113 aa6.85□□□□□ -1.31
TVP23A-205ENST00000572428 FXYD5Q96DB9 178 aa6.85□□□□□ -1.31
TVP23A-205ENST00000572428 KNCNA6PVL3 124 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms