RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 F6UZH7 168 aa11.93□□□□□ -0.5
RPA1-203ENST00000571058 M0R2P5 195 aa11.93□□□□□ -0.5
RPA1-203ENST00000571058 CRYBA4P53673 196 aa11.93□□□□□ -0.5
RPA1-203ENST00000571058 FLI1Q01543 452 aaPredicted RBP11.93□□□□□ -0.5
RPA1-203ENST00000571058 FHL2Q14192 279 aa11.93□□□□□ -0.5
RPA1-203ENST00000571058 MRPL23Q16540 153 aaKnown RBP11.93□□□□□ -0.5
RPA1-203ENST00000571058 SAPCD1Q5SSQ6 148 aa11.93□□□□□ -0.5
RPA1-203ENST00000571058 AKR1C8PQ5T2L2 129 aa11.93□□□□□ -0.5
RPA1-203ENST00000571058 TMEM75Q8N9X5 138 aa11.93□□□□□ -0.5
RPA1-203ENST00000571058 PSG8Q9UQ74 426 aa11.93□□□□□ -0.5
RPA1-203ENST00000571058 IGHV3-16A0A0C4DH30 117 aa11.92□□□□□ -0.5
RPA1-203ENST00000571058 G3V3Q6 166 aa11.92□□□□□ -0.5
RPA1-203ENST00000571058 ARPC5O15511 151 aa11.92□□□□□ -0.5
RPA1-203ENST00000571058 TRAV4A0A0B4J268 109 aa11.91□□□□□ -0.5
RPA1-203ENST00000571058 GNRH2O43555 120 aa11.91□□□□□ -0.5
RPA1-203ENST00000571058 ORM1P02763 201 aa11.91□□□□□ -0.5
RPA1-203ENST00000571058 PFN1P07737 140 aaKnown RBP11.91□□□□□ -0.5
RPA1-203ENST00000571058 PPT1P50897 306 aa11.91□□□□□ -0.5
RPA1-203ENST00000571058 SMUG1Q53HV7 270 aa11.91□□□□□ -0.5
RPA1-203ENST00000571058 C8orf49Q96NF6 230 aa11.91□□□□□ -0.5
RPA1-203ENST00000571058 GCGP01275 180 aa11.9□□□□□ -0.5
RPA1-203ENST00000571058 IGLV2-11P01706 119 aa11.9□□□□□ -0.5
RPA1-203ENST00000571058 TYMSP04818 313 aa11.9□□□□□ -0.5
RPA1-203ENST00000571058 ZNF345Q14585 488 aa11.9□□□□□ -0.5
RPA1-203ENST00000571058 ZNF726P1Q15940 193 aa11.9□□□□□ -0.5
RPA1-203ENST00000571058 NEGR1Q7Z3B1 354 aa11.9□□□□□ -0.5
RPA1-203ENST00000571058 OR4C5Q8NGB2 326 aa11.9□□□□□ -0.5
RPA1-203ENST00000571058 PCNPQ8WW12 178 aaKnown RBP11.9□□□□□ -0.5
RPA1-203ENST00000571058 SGK494Q96LW2 274 aa11.9□□□□□ -0.5
RPA1-203ENST00000571058 CIDEAO60543 219 aa11.89□□□□□ -0.51
RPA1-203ENST00000571058 IFNA7P01567 189 aa11.89□□□□□ -0.51
RPA1-203ENST00000571058 MED14OSP0DP75 135 aa11.89□□□□□ -0.51
RPA1-203ENST00000571058 PRNTQ86SH4 94 aa11.89□□□□□ -0.51
RPA1-203ENST00000571058 HIST1H2BAQ96A08 127 aa11.89□□□□□ -0.51
RPA1-203ENST00000571058 ZNF479Q96JC4 524 aa11.89□□□□□ -0.51
RPA1-203ENST00000571058 PKHD1P08F94 4074 aa11.88□□□□□ -0.51
RPA1-203ENST00000571058 C9JCJ5 164 aa11.88□□□□□ -0.51
RPA1-203ENST00000571058 SIVA1O15304 175 aa11.88□□□□□ -0.51
RPA1-203ENST00000571058 SFTA3P0C7M3 94 aa11.88□□□□□ -0.51
RPA1-203ENST00000571058 STOML3Q8TAV4 291 aa11.88□□□□□ -0.51
RPA1-203ENST00000571058 TXNDC17Q9BRA2 123 aa11.88□□□□□ -0.51
RPA1-203ENST00000571058 TCEAL7Q9BRU2 100 aa11.88□□□□□ -0.51
RPA1-203ENST00000571058 CYTL1Q9NRR1 136 aa11.88□□□□□ -0.51
RPA1-203ENST00000571058 MAP1LC3B2A6NCE7 125 aa11.87□□□□□ -0.51
RPA1-203ENST00000571058 HMSDA8MTL9 139 aa11.87□□□□□ -0.51
RPA1-203ENST00000571058 SRIP30626 198 aa11.87□□□□□ -0.51
RPA1-203ENST00000571058 ZNF80P51504 273 aaPredicted RBP11.87□□□□□ -0.51
RPA1-203ENST00000571058 SH2D6Q7Z4S9 175 aa11.87□□□□□ -0.51
RPA1-203ENST00000571058 KCNRGQ8N5I3 272 aa11.87□□□□□ -0.51
RPA1-203ENST00000571058 MAP1LC3BQ9GZQ8 125 aa11.87□□□□□ -0.51
RPA1-203ENST00000571058 FAM74A7A6NL05 159 aa11.86□□□□□ -0.51
RPA1-203ENST00000571058 K7EQD1 137 aa11.86□□□□□ -0.51
RPA1-203ENST00000571058 NXPH4O95158 308 aa11.86□□□□□ -0.51
RPA1-203ENST00000571058 TNP2Q05952 138 aa11.86□□□□□ -0.51
RPA1-203ENST00000571058 LYPD5Q6UWN5 251 aa11.86□□□□□ -0.51
RPA1-203ENST00000571058 PTH2Q96A98 100 aa11.86□□□□□ -0.51
RPA1-203ENST00000571058 KRTAP1-5Q9BYS1 174 aa11.86□□□□□ -0.51
RPA1-203ENST00000571058 ARL2-SNX15V9GYD0 113 aa11.86□□□□□ -0.51
RPA1-203ENST00000571058 A0A0D9SG52 128 aa11.85□□□□□ -0.51
RPA1-203ENST00000571058 UMAD1C9J7I0 102 aa11.85□□□□□ -0.51
RPA1-203ENST00000571058 K7EP13 123 aa11.85□□□□□ -0.51
RPA1-203ENST00000571058 PEX7O00628 323 aa11.85□□□□□ -0.51
RPA1-203ENST00000571058 GYPEP15421 78 aa11.85□□□□□ -0.51
RPA1-203ENST00000571058 FHITP49789 147 aa11.85□□□□□ -0.51
RPA1-203ENST00000571058 FGF8P55075 233 aaPredicted RBP11.85□□□□□ -0.51
RPA1-203ENST00000571058 UBE2G2P60604 165 aa11.85□□□□□ -0.51
RPA1-203ENST00000571058 ZNF876PQ49A33 203 aa11.85□□□□□ -0.51
RPA1-203ENST00000571058 PKD1P98161 4303 aa11.85□□□□□ -0.51
RPA1-203ENST00000571058 HERC2O95714 4834 aa11.84□□□□□ -0.51
RPA1-203ENST00000571058 FABP5P3A8MUU1 101 aa11.84□□□□□ -0.51
RPA1-203ENST00000571058 SEC11BP0C7V7 166 aa11.84□□□□□ -0.51
RPA1-203ENST00000571058 C9orf85Q96MD7 179 aa11.84□□□□□ -0.51
RPA1-203ENST00000571058 C11orf21Q9P2W6 132 aa11.84□□□□□ -0.51
RPA1-203ENST00000571058 TRAV9-2A0A087WT02 112 aa11.83□□□□□ -0.52
RPA1-203ENST00000571058 SMLR1H3BR10 107 aa11.83□□□□□ -0.52
RPA1-203ENST00000571058 GATA1P15976 413 aaPredicted RBP11.83□□□□□ -0.52
RPA1-203ENST00000571058 EIF5AP63241 154 aaKnown RBP11.83□□□□□ -0.52
RPA1-203ENST00000571058 PIK3CD-AS1Q5SR53 167 aa11.83□□□□□ -0.52
RPA1-203ENST00000571058 Q86TA4 180 aa11.83□□□□□ -0.52
RPA1-203ENST00000571058 FMC1Q96HJ9 113 aa11.83□□□□□ -0.52
RPA1-203ENST00000571058 LINC00479Q96M42 142 aa11.83□□□□□ -0.52
RPA1-203ENST00000571058 ZFP30Q9Y2G7 519 aa11.83□□□□□ -0.52
RPA1-203ENST00000571058 BOLA1Q9Y3E2 137 aa11.83□□□□□ -0.52
RPA1-203ENST00000571058 TRAV34A0A0B4J273 112 aa11.82□□□□□ -0.52
RPA1-203ENST00000571058 KANTRA0A1W2PQU2 76 aa11.82□□□□□ -0.52
RPA1-203ENST00000571058 COX8CQ7Z4L0 72 aa11.82□□□□□ -0.52
RPA1-203ENST00000571058 KIAA1109Q2LD37 5005 aa11.82□□□□□ -0.52
RPA1-203ENST00000571058 RS1O15537 224 aa11.81□□□□□ -0.52
RPA1-203ENST00000571058 TIRAPP58753 221 aa11.81□□□□□ -0.52
RPA1-203ENST00000571058 UBE2G1P62253 170 aa11.81□□□□□ -0.52
RPA1-203ENST00000571058 DPPA3Q6W0C5 159 aa11.81□□□□□ -0.52
RPA1-203ENST00000571058 TRBV6-1A0A0K0K1D8 114 aa11.8□□□□□ -0.52
RPA1-203ENST00000571058 TRBV6-4A0A1B0GX49 114 aa11.8□□□□□ -0.52
RPA1-203ENST00000571058 BCL2L11O43521 198 aa11.8□□□□□ -0.52
RPA1-203ENST00000571058 RNASE3P12724 160 aaKnown RBP11.8□□□□□ -0.52
RPA1-203ENST00000571058 S100A4P26447 101 aaKnown RBP11.8□□□□□ -0.52
RPA1-203ENST00000571058 ASIPP42127 132 aa11.8□□□□□ -0.52
RPA1-203ENST00000571058 CFAP126Q5VTH2 177 aa11.8□□□□□ -0.52
RPA1-203ENST00000571058 CST9LP1Q5W188 147 aa11.8□□□□□ -0.52
RPA1-203ENST00000571058 NFE4Q86UQ8 179 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms