RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 DEFB130BP0DP73 79 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 DEFB130AP0DP74 79 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 ZNF674Q2M3X9 581 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 Q6AWC8 147 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 FAM159AQ6UWV7 190 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 BAGE2Q86Y30 109 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 TMEM183AQ8IXX5 376 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 LYPD6BQ8NI32 183 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 C16orf74Q96GX8 76 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 TXNDC17Q9BRA2 123 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 NOP10Q9NPE3 64 aaKnown RBP9.48□□□□□ -0.89
CCDC40-205ENST00000571028 GSN-AS1Q9NRJ2 163 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 ZFP30Q9Y2G7 519 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 KLF12Q9Y4X4 402 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 RAB19A4D1S5 217 aa9.47□□□□□ -0.89
CCDC40-205ENST00000571028 SNURFLB1AK76 121 aa9.47□□□□□ -0.89
CCDC40-205ENST00000571028 GNRH2O43555 120 aa9.47□□□□□ -0.89
CCDC40-205ENST00000571028 S100A9P06702 114 aaKnown RBP9.47□□□□□ -0.89
CCDC40-205ENST00000571028 TAGLN2P37802 199 aaKnown RBP9.47□□□□□ -0.89
CCDC40-205ENST00000571028 RPL35P42766 123 aaKnown RBP9.47□□□□□ -0.89
CCDC40-205ENST00000571028 ANXA2RQ3ZCQ2 193 aa9.47□□□□□ -0.89
CCDC40-205ENST00000571028 ZNF506Q5JVG8 444 aa9.47□□□□□ -0.89
CCDC40-205ENST00000571028 RNASE8Q8TDE3 154 aaKnown RBP9.47□□□□□ -0.89
CCDC40-205ENST00000571028 TMEM263Q8WUH6 116 aaKnown RBP9.47□□□□□ -0.89
CCDC40-205ENST00000571028 C11orf52Q96A22 123 aa9.47□□□□□ -0.89
CCDC40-205ENST00000571028 ZC2HC1AQ96GY0 325 aa9.47□□□□□ -0.89
CCDC40-205ENST00000571028 PLAC8L1A1L4L8 177 aa9.46□□□□□ -0.9
CCDC40-205ENST00000571028 M0R2N4 97 aa9.46□□□□□ -0.9
CCDC40-205ENST00000571028 LTAP01374 205 aa9.46□□□□□ -0.9
CCDC40-205ENST00000571028 PFN1P07737 140 aaKnown RBP9.46□□□□□ -0.9
CCDC40-205ENST00000571028 HTN3P15516 51 aa9.46□□□□□ -0.9
CCDC40-205ENST00000571028 RAB14P61106 215 aa9.46□□□□□ -0.9
CCDC40-205ENST00000571028 PRR27Q6MZM9 219 aa9.46□□□□□ -0.9
CCDC40-205ENST00000571028 DKK2Q9UBU2 259 aa9.46□□□□□ -0.9
CCDC40-205ENST00000571028 TIMM8BQ9Y5J9 83 aaPredicted RBP9.46□□□□□ -0.9
CCDC40-205ENST00000571028 FAT2Q9NYQ8 4349 aa9.46□□□□□ -0.9
CCDC40-205ENST00000571028 DNAH6Q9C0G6 4158 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 TRBV6-1A0A0K0K1D8 114 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 FABP5P3A8MUU1 101 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 RTL8CO15255 209 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 SH2D1AO60880 128 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 ORM1P02763 201 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 MGST1P10620 155 aaKnown RBP9.45□□□□□ -0.9
CCDC40-205ENST00000571028 DAD1P61803 113 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 C12orf74Q32Q52 190 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 CENPWQ5EE01 88 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 ZNF493Q6ZR52 646 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 Q6ZTC4 211 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 ZNF575Q86XF7 245 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 FAM210AQ96ND0 272 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 SDF2L1Q9HCN8 221 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 C11orf21Q9P2W6 132 aa9.45□□□□□ -0.9
CCDC40-205ENST00000571028 MUC4Q99102 2169 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 DNAH2Q9P225 4427 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 TRGV11A0A075B6L2 103 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 IGHV4-4A0A075B6R2 117 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 GAGE12BA1L429 117 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 M0R036 132 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 GAGE7O76087 117 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 GAGE12FP0CL80 117 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 GAGE12GP0CL81 117 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 GAGE12IP0CL82 117 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 P0DMU3 169 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 FAM231AP0DMU4 169 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 FAM231CP0DMU5 169 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 GNG4P50150 75 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 IFITM2Q01629 132 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 FAM162BQ5T6X4 162 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 LINC00467Q9BRT7 94 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 MDFICQ9P1T7 246 aa9.44□□□□□ -0.9
CCDC40-205ENST00000571028 TMSB15BA0A087X1C1 80 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 TRGV1A0A0A0MS02 117 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 TRAV10A0A0B4J240 114 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 TEX48A0A1B0GUV7 120 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 PGPEP1LA6NFU8 196 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 TYMSP04818 313 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 CRIP1P50238 77 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 ZNF415Q09FC8 603 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 SOHLH1Q5JUK2 328 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 POM121L12Q8N7R1 296 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 MAPKAPK5-AS1Q8N8E1 139 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 C11orf72Q8NBR9 251 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 KCNS1Q96KK3 526 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 PARLQ9H300 379 aa9.43□□□□□ -0.9
CCDC40-205ENST00000571028 MRPL16Q9NX20 251 aaKnown RBP9.43□□□□□ -0.9
CCDC40-205ENST00000571028 GRIFINA4D1Z8 144 aa9.42□□□□□ -0.9
CCDC40-205ENST00000571028 LYRM9A8MSI8 78 aa9.42□□□□□ -0.9
CCDC40-205ENST00000571028 B4DEV8 164 aa9.42□□□□□ -0.9
CCDC40-205ENST00000571028 SRSF3P84103 164 aaKnown RBP9.42□□□□□ -0.9
CCDC40-205ENST00000571028 OR5I1Q13606 314 aa9.42□□□□□ -0.9
CCDC40-205ENST00000571028 Q6ZTI0 123 aa9.42□□□□□ -0.9
CCDC40-205ENST00000571028 DNAH11Q96DT5 4516 aa9.41□□□□□ -0.9
CCDC40-205ENST00000571028 IGKV3D-20A0A0C4DH25 116 aa9.41□□□□□ -0.9
CCDC40-205ENST00000571028 IGHV3-16A0A0C4DH30 117 aa9.41□□□□□ -0.9
CCDC40-205ENST00000571028 SRP19P09132 144 aaKnown RBP9.41□□□□□ -0.9
CCDC40-205ENST00000571028 S100A4P26447 101 aaKnown RBP9.41□□□□□ -0.9
CCDC40-205ENST00000571028 TCL1AP56279 114 aa9.41□□□□□ -0.9
CCDC40-205ENST00000571028 PEA15Q15121 130 aa9.41□□□□□ -0.9
CCDC40-205ENST00000571028 IBA57Q5T440 356 aaKnown RBP9.41□□□□□ -0.9
CCDC40-205ENST00000571028 DYNC1H1Q14204 4646 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms