RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 TCL1BO95988 128 aa3□□□□□ -1.93
CDC27-211ENST00000570740 IGLV2-8P01709 118 aa3□□□□□ -1.93
CDC27-211ENST00000570740 GP1BBP13224 206 aa3□□□□□ -1.93
CDC27-211ENST00000570740 LIFP15018 202 aa3□□□□□ -1.93
CDC27-211ENST00000570740 LOXP28300 417 aaPredicted RBP3□□□□□ -1.93
CDC27-211ENST00000570740 EMDP50402 254 aa3□□□□□ -1.93
CDC27-211ENST00000570740 FAM27E3Q08E93 113 aa3□□□□□ -1.93
CDC27-211ENST00000570740 RSPO1Q2MKA7 263 aaPredicted RBP3□□□□□ -1.93
CDC27-211ENST00000570740 C2orf82Q6UX34 121 aa3□□□□□ -1.93
CDC27-211ENST00000570740 MRPL55Q7Z7F7 128 aaKnown RBP3□□□□□ -1.93
CDC27-211ENST00000570740 NDUFA11Q86Y39 141 aa3□□□□□ -1.93
CDC27-211ENST00000570740 C11orf53Q8IXP5 236 aa3□□□□□ -1.93
CDC27-211ENST00000570740 ORMDL3Q8N138 153 aa3□□□□□ -1.93
CDC27-211ENST00000570740 EXOC3-AS1Q8N2X6 119 aa3□□□□□ -1.93
CDC27-211ENST00000570740 RNF182Q8N6D2 247 aa3□□□□□ -1.93
CDC27-211ENST00000570740 ZNF441Q8N8Z8 693 aa3□□□□□ -1.93
CDC27-211ENST00000570740 UBALD1Q8TB05 177 aa3□□□□□ -1.93
CDC27-211ENST00000570740 SPTSSAQ969W0 71 aa3□□□□□ -1.93
CDC27-211ENST00000570740 FMC1Q96HJ9 113 aa3□□□□□ -1.93
CDC27-211ENST00000570740 C18orf15Q96N68 181 aa3□□□□□ -1.93
CDC27-211ENST00000570740 PAXXQ9BUH6 204 aa3□□□□□ -1.93
CDC27-211ENST00000570740 RTL8AQ9BWD3 113 aa3□□□□□ -1.93
CDC27-211ENST00000570740 RETNQ9HD89 108 aa3□□□□□ -1.93
CDC27-211ENST00000570740 LINC00527Q9UJ94 153 aa3□□□□□ -1.93
CDC27-211ENST00000570740 TIMM8BQ9Y5J9 83 aaPredicted RBP3□□□□□ -1.93
CDC27-211ENST00000570740 U3KQK5 164 aa3□□□□□ -1.93
CDC27-211ENST00000570740 ACACAQ13085 2346 aa3□□□□□ -1.93
CDC27-211ENST00000570740 URB1O60287 2271 aaKnown RBP3□□□□□ -1.93
CDC27-211ENST00000570740 TPRP12270 2363 aaKnown RBP3□□□□□ -1.93
CDC27-211ENST00000570740 CEP295Q9C0D2 2601 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 TRAV12-1A0A0B4J245 112 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 IGKV1-9A0A0C4DH69 117 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 TRBV6-1A0A0K0K1D8 114 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 hADV29S1A0JD25 119 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 LINC01546A6NGU7 62 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 EPM2AB3EWF7 344 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 UPK2O00526 184 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 CXCL13O43927 109 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 NGFP01138 241 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 LTAP01374 205 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 IGLV2-11P01706 119 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 IGLV3-1P01715 115 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 FKBP2P26885 142 aaKnown RBP2.99□□□□□ -1.93
CDC27-211ENST00000570740 RPS27P42677 84 aaKnown RBP2.99□□□□□ -1.93
CDC27-211ENST00000570740 ERVK-16P61578 105 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 RPL18AQ02543 176 aaKnown RBP2.99□□□□□ -1.93
CDC27-211ENST00000570740 TFF3Q07654 80 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 ZC2HC1BQ5TFG8 222 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 ZFP2Q6ZN57 461 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 FAM19A1Q7Z5A9 133 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 THAP8Q8NA92 274 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 PATE1Q8WXA2 126 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 MRPL53Q96EL3 112 aaKnown RBP2.99□□□□□ -1.93
CDC27-211ENST00000570740 PGLYRP4Q96LB8 373 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 FAM19A4Q96LR4 140 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 C2orf48Q96LS8 159 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 S1PR3Q99500 378 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 FAM173AQ9BQD7 235 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 SRXN1Q9BYN0 137 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 CALYQ9NYX4 217 aa2.99□□□□□ -1.93
CDC27-211ENST00000570740 KIF26BQ2KJY2 2108 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 NUP214P35658 2090 aaPredicted RBP2.98□□□□□ -1.93
CDC27-211ENST00000570740 TMSB15BA0A087X1C1 80 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 TRAV26-2A0A0B4J265 109 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 IGHV5-51A0A0C4DH38 117 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 TRBV30A0A0K0K1B3 111 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 A0A1W2PNU3 283 aaPredicted RBP2.98□□□□□ -1.93
CDC27-211ENST00000570740 C19orf71A6NCJ1 209 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 LY6LH3BQJ8 138 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 TMEM178BH3BS89 294 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 K7EMI3 77 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 SPINT2O43291 252 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 NDUFC1O43677 76 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 WISP2O76076 250 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 IGKV1-5P01602 117 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 IGHG2P01859 326 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 CFC1BP0CG36 223 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 CFC1P0CG37 223 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 IFI27P40305 119 aaPredicted RBP2.98□□□□□ -1.93
CDC27-211ENST00000570740 SUB1P53999 127 aaKnown RBP eCLIP2.98□□□□□ -1.933e-6■■■■■ 29.6
CDC27-211ENST00000570740 GFERP55789 205 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 SYNJ2BPP57105 145 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 ZNF816Q0VGE8 651 aaPredicted RBP2.98□□□□□ -1.93
CDC27-211ENST00000570740 S100A7L2Q5SY68 101 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 MIC13Q5XKP0 118 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 FAM104BQ5XKR9 115 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 SCGB1D4Q6XE38 83 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 ZNF497Q6ZNH5 498 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 MKXQ8IYA7 352 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 LINC00311Q8N616 119 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 C3orf56Q8N813 242 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 FLVCR1-AS1Q8TAF5 88 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 SPACA5Q96QH8 159 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 Q9H8V8 135 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 ANKRD11Q6UB99 2663 aaPredicted RBP2.98□□□□□ -1.93
CDC27-211ENST00000570740 SCN2AQ99250 2005 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 MYO15AQ9UKN7 3530 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 CHD8Q9HCK8 2581 aa2.98□□□□□ -1.93
CDC27-211ENST00000570740 KMT2BQ9UMN6 2715 aaPredicted RBP2.98□□□□□ -1.93
CDC27-211ENST00000570740 AKAP13Q12802 2813 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms