RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 C2orf88Q9BSF0 95 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 TMEM160Q9NX00 188 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 HOXD3P31249 432 aaPredicted RBP8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 LINC00310P59036 64 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 LAGE3Q14657 143 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 IGHG4P01861 327 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 IGLC3P0DOY3 106 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 TCTEX1D4Q5JR98 221 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 SCGB3A1Q96QR1 104 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 ASPMQ8IZT6 3477 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 TRAV26-2A0A0B4J265 109 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 IGHV4-31P0DP07 118 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 GPHB5Q86YW7 130 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 DUX3Q96PT4 197 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 SNHG12Q9BXW3 62 aa8.91□□□□□ -0.98
PDXDC1-217ENST00000570001 K7EMT4 169 aa8.9□□□□□ -0.98
PDXDC1-217ENST00000570001 TMEM158Q8WZ71 300 aa8.9□□□□□ -0.98
PDXDC1-217ENST00000570001 MS4A6AQ9H2W1 248 aa8.9□□□□□ -0.98
PDXDC1-217ENST00000570001 MAJINQ3KP22 176 aa8.9□□□□□ -0.98
PDXDC1-217ENST00000570001 ZNF493Q6ZR52 646 aa8.9□□□□□ -0.98
PDXDC1-217ENST00000570001 LINC00173Q6ZV60 143 aa8.9□□□□□ -0.98
PDXDC1-217ENST00000570001 LINC01619G3V211 115 aa8.9□□□□□ -0.99
PDXDC1-217ENST00000570001 ORMDL2Q53FV1 153 aa8.9□□□□□ -0.99
PDXDC1-217ENST00000570001 DMRTA1Q5VZB9 504 aa8.9□□□□□ -0.99
PDXDC1-217ENST00000570001 OR11H1Q8NG94 326 aa8.9□□□□□ -0.99
PDXDC1-217ENST00000570001 IGLL1P15814 213 aa8.89□□□□□ -0.99
PDXDC1-217ENST00000570001 BBC3Q96PG8 261 aaPredicted RBP8.89□□□□□ -0.99
PDXDC1-217ENST00000570001 TRAV8-2A0A0B4J237 113 aa8.89□□□□□ -0.99
PDXDC1-217ENST00000570001 TMEM89A2RUT3 159 aa8.89□□□□□ -0.99
PDXDC1-217ENST00000570001 SRSF2Q01130 221 aaKnown RBP8.89□□□□□ -0.99
PDXDC1-217ENST00000570001 SPINK13Q1W4C9 94 aa8.89□□□□□ -0.99
PDXDC1-217ENST00000570001 RRN3P1Q2M238 152 aa8.89□□□□□ -0.99
PDXDC1-217ENST00000570001 DEFB136Q30KP8 78 aa8.89□□□□□ -0.99
PDXDC1-217ENST00000570001 ANKRD17O75179 2603 aaKnown RBP8.89□□□□□ -0.99
PDXDC1-217ENST00000570001 OR1N2Q8NGR9 330 aa8.89□□□□□ -0.99
PDXDC1-217ENST00000570001 MRAP2Q96G30 205 aa8.89□□□□□ -0.99
PDXDC1-217ENST00000570001 CRIP2P52943 208 aaPredicted RBP8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 DEFB131AP59861 70 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 LRRC75A-AS1Q8N1F1 130 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 ZNF747Q9BV97 191 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 ABCA12Q86UK0 2595 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 TRGV11A0A075B6L2 103 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 TRAV12-2A0A075B6T6 113 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 IGLC6P0CF74 106 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 UBE2E2Q96LR5 201 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 IGHV4OR15-8A0A075B7B6 117 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 A0A087WW49 117 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 IGKV3D-20A0A0C4DH25 116 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 SPRY2O43597 315 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 Q8N8P6 123 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 GNRH2O43555 120 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 GATA1P15976 413 aaPredicted RBP8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 LINC01587Q99440 93 aa8.88□□□□□ -0.99
PDXDC1-217ENST00000570001 A6NDN8 102 aa8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 C10orf99Q6UWK7 81 aa8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 MRPL52Q86TS9 123 aaKnown RBP8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 C20orf173Q96LM9 149 aa8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 ZNF256Q9Y2P7 627 aaPredicted RBP8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 PRRC2AP48634 2157 aaKnown RBP8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 NUTF2P61970 127 aaKnown RBP8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 Q6YL49 198 aa8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 LAMA5O15230 3695 aa8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 A0A087WWL8 130 aa8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 CDKN1BP46527 198 aa8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 HERVK_113P61574 105 aa8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 DPM2O94777 84 aa8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 IGLV1-40P01703 118 aa8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 KRTAP10-9P60411 292 aa8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 U3KQE9 123 aa8.87□□□□□ -0.99
PDXDC1-217ENST00000570001 C2orf70A6NJV1 201 aa8.86□□□□□ -0.99
PDXDC1-217ENST00000570001 IGKCP01834 107 aa8.86□□□□□ -0.99
PDXDC1-217ENST00000570001 KLK9Q9UKQ9 250 aa8.86□□□□□ -0.99
PDXDC1-217ENST00000570001 SORL1Q92673 2214 aa8.86□□□□□ -0.99
PDXDC1-217ENST00000570001 H7C1H1 209 aa8.86□□□□□ -0.99
PDXDC1-217ENST00000570001 SLURP1P55000 103 aa8.86□□□□□ -0.99
PDXDC1-217ENST00000570001 OR4C5Q8NGB2 326 aa8.86□□□□□ -0.99
PDXDC1-217ENST00000570001 RNF114Q9Y508 228 aa8.86□□□□□ -0.99
PDXDC1-217ENST00000570001 TRAV8-6A0A0B4J262 113 aa8.85□□□□□ -0.99
PDXDC1-217ENST00000570001 PSMB8P28062 276 aa8.85□□□□□ -0.99
PDXDC1-217ENST00000570001 SCGB1D4Q6XE38 83 aa8.85□□□□□ -0.99
PDXDC1-217ENST00000570001 SUMO2P61956 95 aaKnown RBP8.85□□□□□ -0.99
PDXDC1-217ENST00000570001 STHQ8IWL8 128 aa8.85□□□□□ -0.99
PDXDC1-217ENST00000570001 CSTL1Q9H114 145 aa8.85□□□□□ -0.99
PDXDC1-217ENST00000570001 CYSLTR1Q9Y271 337 aa8.85□□□□□ -0.99
PDXDC1-217ENST00000570001 MRPS16Q9Y3D3 137 aaKnown RBP8.85□□□□□ -0.99
PDXDC1-217ENST00000570001 STPG4Q8N801 248 aa8.84□□□□□ -0.99
PDXDC1-217ENST00000570001 DEFB104AQ8WTQ1 72 aa8.84□□□□□ -0.99
PDXDC1-217ENST00000570001 IGHV1OR15-1A0A075B7D0 117 aa8.84□□□□□ -0.99
PDXDC1-217ENST00000570001 WNK1Q9H4A3 2382 aa8.84□□□□□ -0.99
PDXDC1-217ENST00000570001 LGALS9BQ3B8N2 356 aa8.84□□□□□ -0.99
PDXDC1-217ENST00000570001 LGALS9CQ6DKI2 356 aa8.84□□□□□ -0.99
PDXDC1-217ENST00000570001 KNCNA6PVL3 124 aa8.84□□□□□ -0.99
PDXDC1-217ENST00000570001 GCSHP23434 173 aa8.84□□□□□ -0.99
PDXDC1-217ENST00000570001 LINC00469Q8N7U9 141 aa8.84□□□□□ -0.99
PDXDC1-217ENST00000570001 SMIM2Q9BVW6 85 aa8.84□□□□□ -0.99
PDXDC1-217ENST00000570001 OR11H12B2RN74 326 aa8.83□□□□□ -1
PDXDC1-217ENST00000570001 OR11H2Q8NH07 326 aa8.83□□□□□ -1
PDXDC1-217ENST00000570001 ZNF876PQ49A33 203 aa8.83□□□□□ -1
PDXDC1-217ENST00000570001 MPV17L2Q567V2 206 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms