RNA–Protein interactions for RNA: ENST00000569783.1

CDH11-218, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-218ENST00000569783 SDF2L1Q9HCN8 221 aa13.09□□□□□ -0.31
CDH11-218ENST00000569783 A0A1W2PPV4 95 aa13.08□□□□□ -0.32
CDH11-218ENST00000569783 KCNS1Q96KK3 526 aa13.08□□□□□ -0.32
CDH11-218ENST00000569783 SMIM3Q9BZL3 60 aa13.08□□□□□ -0.32
CDH11-218ENST00000569783 IGHV3-16A0A0C4DH30 117 aa13.07□□□□□ -0.32
CDH11-218ENST00000569783 IGHV3-38A0A0C4DH36 116 aa13.07□□□□□ -0.32
CDH11-218ENST00000569783 INMT-MINDY4F8WBC2 141 aa13.07□□□□□ -0.32
CDH11-218ENST00000569783 ACOT6Q3I5F7 207 aaPredicted RBP13.07□□□□□ -0.32
CDH11-218ENST00000569783 PQLC2Q6ZP29 291 aa13.07□□□□□ -0.32
CDH11-218ENST00000569783 GOLT1AQ6ZVE7 132 aa13.07□□□□□ -0.32
CDH11-218ENST00000569783 ARL6IP6Q8N6S5 226 aa13.07□□□□□ -0.32
CDH11-218ENST00000569783 TREM1Q9NP99 234 aa13.07□□□□□ -0.32
CDH11-218ENST00000569783 BOLA1Q9Y3E2 137 aa13.07□□□□□ -0.32
CDH11-218ENST00000569783 LOC100131303A0A0U1RQF7 123 aa13.06□□□□□ -0.32
CDH11-218ENST00000569783 F6UZH7 168 aa13.06□□□□□ -0.32
CDH11-218ENST00000569783 UPK1BO75841 260 aa13.06□□□□□ -0.32
CDH11-218ENST00000569783 TYMSP04818 313 aa13.06□□□□□ -0.32
CDH11-218ENST00000569783 RPL12P30050 165 aaKnown RBP13.06□□□□□ -0.32
CDH11-218ENST00000569783 H2BFSP57053 126 aa13.06□□□□□ -0.32
CDH11-218ENST00000569783 TRAV8-6A0A0B4J262 113 aa13.05□□□□□ -0.32
CDH11-218ENST00000569783 SSNA1O43805 119 aa13.05□□□□□ -0.32
CDH11-218ENST00000569783 EIF3GO75821 320 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDH11-218ENST00000569783 MPC2O95563 127 aa13.05□□□□□ -0.32
CDH11-218ENST00000569783 PFN1P07737 140 aaKnown RBP13.05□□□□□ -0.32
CDH11-218ENST00000569783 TIRAPP58753 221 aa13.05□□□□□ -0.32
CDH11-218ENST00000569783 ASB13Q8WXK3 278 aa13.05□□□□□ -0.32
CDH11-218ENST00000569783 NDFIP1Q9BT67 221 aa13.05□□□□□ -0.32
CDH11-218ENST00000569783 IGLV5-52A0A0A0MRZ9 124 aa13.04□□□□□ -0.32
CDH11-218ENST00000569783 FBLL1A6NHQ2 334 aaKnown RBP13.04□□□□□ -0.32
CDH11-218ENST00000569783 FAM229AH3BQW9 127 aa13.04□□□□□ -0.32
CDH11-218ENST00000569783 GATA1P15976 413 aaPredicted RBP13.04□□□□□ -0.32
CDH11-218ENST00000569783 PRADC1Q9BSG0 188 aa13.04□□□□□ -0.32
CDH11-218ENST00000569783 TRAV8-1A0A0A6YYK1 113 aa13.03□□□□□ -0.32
CDH11-218ENST00000569783 CIDEAO60543 219 aa13.03□□□□□ -0.32
CDH11-218ENST00000569783 SMR3BP02814 79 aaPredicted RBP13.03□□□□□ -0.32
CDH11-218ENST00000569783 LINC01556Q5JQF7 62 aa13.03□□□□□ -0.32
CDH11-218ENST00000569783 OR10J3Q5JRS4 329 aa13.03□□□□□ -0.32
CDH11-218ENST00000569783 NTN5Q8WTR8 489 aaPredicted RBP13.03□□□□□ -0.32
CDH11-218ENST00000569783 ZNF876PQ49A33 203 aa13.02□□□□□ -0.33
CDH11-218ENST00000569783 TVP23CQ96ET8 276 aa13.02□□□□□ -0.33
CDH11-218ENST00000569783 SERTM2A0A1B0GWG4 89 aa13.01□□□□□ -0.33
CDH11-218ENST00000569783 IBA57-AS1B1ANH7 110 aa13.01□□□□□ -0.33
CDH11-218ENST00000569783 GNG5P63218 68 aa13.01□□□□□ -0.33
CDH11-218ENST00000569783 RHOHQ15669 191 aa13.01□□□□□ -0.33
CDH11-218ENST00000569783 SLC25A29Q8N8R3 303 aa13.01□□□□□ -0.33
CDH11-218ENST00000569783 MARVELD1Q9BSK0 173 aa13.01□□□□□ -0.33
CDH11-218ENST00000569783 TRBV6-4A0A1B0GX49 114 aa13□□□□□ -0.33
CDH11-218ENST00000569783 K7EQM0 130 aa13□□□□□ -0.33
CDH11-218ENST00000569783 HMGB3O15347 200 aaKnown RBP13□□□□□ -0.33
CDH11-218ENST00000569783 RAB2AP61019 212 aa13□□□□□ -0.33
CDH11-218ENST00000569783 OR10G9Q8NGN4 311 aa13□□□□□ -0.33
CDH11-218ENST00000569783 OR10G7Q8NGN6 311 aa13□□□□□ -0.33
CDH11-218ENST00000569783 TMEM70Q9BUB7 260 aa13□□□□□ -0.33
CDH11-218ENST00000569783 Q9HAA7 133 aa13□□□□□ -0.33
CDH11-218ENST00000569783 LRCOL1A6NCL2 159 aa12.99□□□□□ -0.33
CDH11-218ENST00000569783 TAAR5O14804 337 aa12.99□□□□□ -0.33
CDH11-218ENST00000569783 SGK494Q96LW2 274 aa12.99□□□□□ -0.33
CDH11-218ENST00000569783 WFDC1Q9HC57 220 aa12.99□□□□□ -0.33
CDH11-218ENST00000569783 IGHV3-73A0A0B4J1V6 119 aa12.98□□□□□ -0.33
CDH11-218ENST00000569783 RS1O15537 224 aa12.98□□□□□ -0.33
CDH11-218ENST00000569783 ZFP69Q49AA0 526 aa12.98□□□□□ -0.33
CDH11-218ENST00000569783 LELP1Q5T871 98 aa12.98□□□□□ -0.33
CDH11-218ENST00000569783 CFAP126Q5VTH2 177 aa12.98□□□□□ -0.33
CDH11-218ENST00000569783 Q8N814 137 aa12.98□□□□□ -0.33
CDH11-218ENST00000569783 IGHV3-30P01768 117 aa12.97□□□□□ -0.33
CDH11-218ENST00000569783 IGHV3-33P01772 117 aa12.97□□□□□ -0.33
CDH11-218ENST00000569783 ARL14EPLP0DKL9 152 aa12.97□□□□□ -0.33
CDH11-218ENST00000569783 IGHV3-30-3P0DP02 117 aa12.97□□□□□ -0.33
CDH11-218ENST00000569783 IGHV3-30-5P0DP03 117 aa12.97□□□□□ -0.33
CDH11-218ENST00000569783 CDC34P49427 236 aaPredicted RBP12.97□□□□□ -0.33
CDH11-218ENST00000569783 DEFA1P59665 94 aa12.97□□□□□ -0.33
CDH11-218ENST00000569783 DEFA3P59666 94 aa12.97□□□□□ -0.33
CDH11-218ENST00000569783 HAMPP81172 84 aa12.97□□□□□ -0.33
CDH11-218ENST00000569783 IFITM3Q01628 133 aa12.97□□□□□ -0.33
CDH11-218ENST00000569783 Q6ZSN1 163 aa12.97□□□□□ -0.33
CDH11-218ENST00000569783 C5orf17Q8NAS9 161 aa12.97□□□□□ -0.33
CDH11-218ENST00000569783 GCGP01275 180 aa12.96□□□□□ -0.33
CDH11-218ENST00000569783 TCRAP04437 139 aa12.96□□□□□ -0.33
CDH11-218ENST00000569783 MGST1P10620 155 aaKnown RBP12.96□□□□□ -0.33
CDH11-218ENST00000569783 ATP6V0E2Q8NHE4 81 aa12.96□□□□□ -0.33
CDH11-218ENST00000569783 TM2D2Q9BX73 214 aa12.96□□□□□ -0.33
CDH11-218ENST00000569783 GTSF1LQ9H1H1 148 aa12.96□□□□□ -0.33
CDH11-218ENST00000569783 SH3BGRL3Q9H299 93 aa12.96□□□□□ -0.33
CDH11-218ENST00000569783 PSG8Q9UQ74 426 aa12.95□□□□□ -0.34
CDH11-218ENST00000569783 STAG3L2P0CL84 134 aa12.94□□□□□ -0.34
CDH11-218ENST00000569783 STAG3L3P0CL85 134 aa12.94□□□□□ -0.34
CDH11-218ENST00000569783 ZNF80P51504 273 aaPredicted RBP12.94□□□□□ -0.34
CDH11-218ENST00000569783 LAGE3Q14657 143 aa12.94□□□□□ -0.34
CDH11-218ENST00000569783 SMUG1Q53HV7 270 aa12.94□□□□□ -0.34
CDH11-218ENST00000569783 ZNF506Q5JVG8 444 aa12.94□□□□□ -0.34
CDH11-218ENST00000569783 DPPA3Q6W0C5 159 aa12.94□□□□□ -0.34
CDH11-218ENST00000569783 PTH2Q96A98 100 aa12.94□□□□□ -0.34
CDH11-218ENST00000569783 C9orf85Q96MD7 179 aa12.94□□□□□ -0.34
CDH11-218ENST00000569783 C11orf21Q9P2W6 132 aa12.94□□□□□ -0.34
CDH11-218ENST00000569783 HERC1Q15751 4861 aa12.94□□□□□ -0.34
CDH11-218ENST00000569783 DMBT1Q9UGM3 2413 aaPredicted RBP12.93□□□□□ -0.34
CDH11-218ENST00000569783 PGPEP1LA6NFU8 196 aa12.93□□□□□ -0.34
CDH11-218ENST00000569783 FLI1Q01543 452 aaPredicted RBP12.93□□□□□ -0.34
CDH11-218ENST00000569783 PRNTQ86SH4 94 aa12.93□□□□□ -0.34
CDH11-218ENST00000569783 MBP02144 154 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms