RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 KRTDAPP60985 99 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 TWIST1Q15672 202 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 TDRG1Q3Y452 100 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 EBLN2Q6P2I7 272 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 RNASEKQ6P5S7 137 aaKnown RBP4.06□□□□□ -1.76
SF3B3-213ENST00000569687 PET117Q6UWS5 81 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 MRPL52Q86TS9 123 aaKnown RBP4.06□□□□□ -1.76
SF3B3-213ENST00000569687 LURAP1LQ8IV03 231 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 ORMDL3Q8N138 153 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 ZNF738Q8NE65 137 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 OR8A1Q8NGG7 326 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 OR10J6PQ8NGY7 276 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 RNF185Q96GF1 192 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 ODF3Q96PU9 254 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 TMEM70Q9BUB7 260 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 ANK3Q12955 4377 aaKnown RBP4.06□□□□□ -1.76
SF3B3-213ENST00000569687 ANKRD17O75179 2603 aaKnown RBP4.05□□□□□ -1.76
SF3B3-213ENST00000569687 PRRC2AP48634 2157 aaKnown RBP4.05□□□□□ -1.76
SF3B3-213ENST00000569687 CELSR1Q9NYQ6 3014 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 TRAV9-2A0A087WT02 112 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 TRAV21A0A0B4J279 112 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 IGHV1-24A0A0C4DH33 117 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 SYS1-DBNDD2H3BUS1 97 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 HOXA3O43365 443 aaPredicted RBP4.05□□□□□ -1.76
SF3B3-213ENST00000569687 TCF21O43680 179 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 LEPROTL1O95214 131 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 PRB4P10163 310 aaPredicted RBP4.05□□□□□ -1.76
SF3B3-213ENST00000569687 LCNL1Q6ZST4 164 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 AMN1Q8IY45 258 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 LINC00482Q8N8I6 264 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 PRSS3P2Q8NHM4 247 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 DCANP1Q8TF63 244 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 PRELID3AQ96N28 172 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 C2orf88Q9BSF0 95 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 VAMP8Q9BV40 100 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 TPPP3Q9BW30 176 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 SCRT2Q9NQ03 307 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 HSPB8Q9UJY1 196 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 PTPN13Q12923 2485 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 MXRA5Q9NR99 2828 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 POLQO75417 2590 aa4.05□□□□□ -1.76
SF3B3-213ENST00000569687 NAV2Q8IVL1 2488 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 UNC79Q9P2D8 2635 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 ABCA12Q86UK0 2595 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 TRAV2A0A0B4J234 112 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 KLLNB2CW77 178 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 D6R8Y8 96 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 K7EQG2 157 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 CKS2P33552 79 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 IFI27P40305 119 aaPredicted RBP4.04□□□□□ -1.76
SF3B3-213ENST00000569687 C10orf99Q6UWK7 81 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 FA2HQ7L5A8 372 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 SMIM15Q7Z3B0 74 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 KLHDC1Q8N7A1 406 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 POM121L12Q8N7R1 296 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 OR10AG1Q8NH19 301 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 ZNF747Q9BV97 191 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 MAP1LC3CQ9BXW4 147 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 SIGLEC8Q9NYZ4 499 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 MSRB1Q9NZV6 116 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 CSPG4Q6UVK1 2322 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 CR1P17927 2039 aa4.04□□□□□ -1.76
SF3B3-213ENST00000569687 TEX15Q9BXT5 2789 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 ZANQ9Y493 2812 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 M0QZ24 198 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 DUSP14O95147 198 aaKnown RBP4.03□□□□□ -1.76
SF3B3-213ENST00000569687 NXPH4O95158 308 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 NPYP01303 97 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 IGLC3P0DOY3 106 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 GAGE13Q4V321 117 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 PSMG4Q5JS54 123 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 PRR31Q5SQ13 230 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 PRR9Q5T870 116 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 LINC01545Q5VT33 79 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 Q8N8P6 123 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 MRAP2Q96G30 205 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 MS4A6AQ9H2W1 248 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 NXT2Q9NPJ8 142 aaKnown RBP4.03□□□□□ -1.76
SF3B3-213ENST00000569687 FAM30AQ9NZY2 134 aa4.03□□□□□ -1.76
SF3B3-213ENST00000569687 IGLV2-18A0A075B6J9 118 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 IGHV4OR15-8A0A075B7B6 117 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 A0A087WW49 117 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 A0A096LNJ9 63 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 MUC21A0A0G2JKD1 596 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 A0A0J9YX75 114 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 MUC21A0A140T8X8 626 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 A8MTW9 85 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 M0R143 59 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 CD5LO43866 347 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 CSN3P07498 182 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 FCER1GP30273 86 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 HOXD3P31249 432 aaPredicted RBP4.02□□□□□ -1.77
SF3B3-213ENST00000569687 RNASE4P34096 147 aaKnown RBP4.02□□□□□ -1.77
SF3B3-213ENST00000569687 LEPP41159 167 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 ASIPP42127 132 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 SYNJ2BPP57105 145 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 SNRPD3P62318 126 aaKnown RBP4.02□□□□□ -1.77
SF3B3-213ENST00000569687 KRTAP1-1Q07627 177 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 ANXA2RQ3ZCQ2 193 aa4.02□□□□□ -1.77
SF3B3-213ENST00000569687 SPATA45Q537H7 98 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms