RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 RIPPLY3P57055 190 aa5.91□□□□□ -1.46
LINC00559-201ENST00000569476 Q5PR19 223 aa5.91□□□□□ -1.46
LINC00559-201ENST00000569476 C2orf91Q6ZV80 131 aa5.91□□□□□ -1.46
LINC00559-201ENST00000569476 TMEM158Q8WZ71 300 aa5.91□□□□□ -1.46
LINC00559-201ENST00000569476 SPEGQ15772 3267 aa5.91□□□□□ -1.46
LINC00559-201ENST00000569476 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.91□□□□□ -1.46
LINC00559-201ENST00000569476 H3BRM9 83 aa5.91□□□□□ -1.46
LINC00559-201ENST00000569476 CRYBA4P53673 196 aa5.91□□□□□ -1.46
LINC00559-201ENST00000569476 MAJINQ3KP22 176 aa5.91□□□□□ -1.46
LINC00559-201ENST00000569476 FOXC2Q99958 501 aa5.91□□□□□ -1.46
LINC00559-201ENST00000569476 MSRB1Q9NZV6 116 aa5.91□□□□□ -1.46
LINC00559-201ENST00000569476 RIF1Q5UIP0 2472 aaKnown RBP5.91□□□□□ -1.46
LINC00559-201ENST00000569476 PLXNB1O43157 2135 aa5.9□□□□□ -1.46
LINC00559-201ENST00000569476 NCR2O95944 276 aa5.9□□□□□ -1.46
LINC00559-201ENST00000569476 RNASE3P12724 160 aaKnown RBP5.9□□□□□ -1.46
LINC00559-201ENST00000569476 FREM2Q5SZK8 3169 aa5.9□□□□□ -1.46
LINC00559-201ENST00000569476 RNASE4P34096 147 aaKnown RBP5.9□□□□□ -1.47
LINC00559-201ENST00000569476 UBE2V1Q13404 147 aa5.9□□□□□ -1.47
LINC00559-201ENST00000569476 SMKR1H3BMG3 65 aa5.9□□□□□ -1.47
LINC00559-201ENST00000569476 VCYO14598 125 aa5.9□□□□□ -1.47
LINC00559-201ENST00000569476 TGFAP01135 160 aa5.9□□□□□ -1.47
LINC00559-201ENST00000569476 HINT1P49773 126 aaPredicted RBP5.9□□□□□ -1.47
LINC00559-201ENST00000569476 RASL10AQ92737 203 aa5.9□□□□□ -1.47
LINC00559-201ENST00000569476 TIMM17AQ99595 171 aa5.9□□□□□ -1.47
LINC00559-201ENST00000569476 IGHV3OR16-8A0A075B7F1 116 aa5.89□□□□□ -1.47
LINC00559-201ENST00000569476 IGHV3-11P01762 117 aa5.89□□□□□ -1.47
LINC00559-201ENST00000569476 SPAG8Q99932 426 aaPredicted RBP5.89□□□□□ -1.47
LINC00559-201ENST00000569476 IGHV1OR15-1A0A075B7D0 117 aa5.89□□□□□ -1.47
LINC00559-201ENST00000569476 IGHV3-16A0A0C4DH30 117 aa5.89□□□□□ -1.47
LINC00559-201ENST00000569476 CDKN1BP46527 198 aa5.89□□□□□ -1.47
LINC00559-201ENST00000569476 FRYQ5TBA9 3013 aa5.89□□□□□ -1.47
LINC00559-201ENST00000569476 F8VRH5 84 aa5.89□□□□□ -1.47
LINC00559-201ENST00000569476 BATFQ16520 125 aa5.89□□□□□ -1.47
LINC00559-201ENST00000569476 ERASQ7Z444 233 aa5.89□□□□□ -1.47
LINC00559-201ENST00000569476 TMEM160Q9NX00 188 aa5.89□□□□□ -1.47
LINC00559-201ENST00000569476 LINC00527Q9UJ94 153 aa5.89□□□□□ -1.47
LINC00559-201ENST00000569476 PKDREJQ9NTG1 2253 aa5.89□□□□□ -1.47
LINC00559-201ENST00000569476 CFAP54Q96N23 3096 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 IGHV3-49A0A0A0MS15 119 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 K7EP13 123 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 NUDT3O95989 172 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 LINC00315P59091 139 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 ZNF124Q15973 351 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 NSUN5P1Q3KNT7 163 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 PRSS1P07477 247 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 POLR2KP53803 58 aaKnown RBP5.88□□□□□ -1.47
LINC00559-201ENST00000569476 ANKRD39Q53RE8 183 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 ADAMTSL5Q6ZMM2 481 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 TRPT1Q86TN4 253 aaKnown RBP5.88□□□□□ -1.47
LINC00559-201ENST00000569476 NEXN-AS1Q8NBZ9 246 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 HHLA3Q9XRX5 114 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 IGHV3OR16-13A0A075B7E8 117 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 IGHV3-74A0A0B4J1X5 117 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 TRBV27A0A0K0K1C4 114 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 RNF223E7ERA6 249 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 TAX1BP3O14907 124 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 RPL11P62913 178 aaKnown RBP5.88□□□□□ -1.47
LINC00559-201ENST00000569476 C16orf95Q9H693 158 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 CYSLTR1Q9Y271 337 aa5.88□□□□□ -1.47
LINC00559-201ENST00000569476 MPV17L2Q567V2 206 aa5.87□□□□□ -1.47
LINC00559-201ENST00000569476 SPXQ9BT56 116 aa5.87□□□□□ -1.47
LINC00559-201ENST00000569476 FOSL1P15407 271 aa5.87□□□□□ -1.47
LINC00559-201ENST00000569476 HOXD3P31249 432 aaPredicted RBP5.87□□□□□ -1.47
LINC00559-201ENST00000569476 AMTNQ6UX39 209 aa5.87□□□□□ -1.47
LINC00559-201ENST00000569476 Q6ZS46 218 aa5.87□□□□□ -1.47
LINC00559-201ENST00000569476 DNAJC30Q96LL9 226 aa5.87□□□□□ -1.47
LINC00559-201ENST00000569476 SCGB3A1Q96QR1 104 aa5.87□□□□□ -1.47
LINC00559-201ENST00000569476 FAM110AQ9BQ89 295 aa5.87□□□□□ -1.47
LINC00559-201ENST00000569476 TM2D2Q9BX73 214 aa5.87□□□□□ -1.47
LINC00559-201ENST00000569476 CHTOPQ9Y3Y2 248 aaKnown RBP5.87□□□□□ -1.47
LINC00559-201ENST00000569476 KIR2DL4Q99706 377 aa5.86□□□□□ -1.47
LINC00559-201ENST00000569476 PIEZO2Q9H5I5 2752 aa5.86□□□□□ -1.47
LINC00559-201ENST00000569476 ARHGAP32A7KAX9 2087 aa5.86□□□□□ -1.47
LINC00559-201ENST00000569476 C9orf118A6NHY6 69 aa5.86□□□□□ -1.47
LINC00559-201ENST00000569476 CIDEAO60543 219 aa5.86□□□□□ -1.47
LINC00559-201ENST00000569476 HERVK_113P61574 105 aa5.86□□□□□ -1.47
LINC00559-201ENST00000569476 TLN1Q9Y490 2541 aaKnown RBP5.86□□□□□ -1.47
LINC00559-201ENST00000569476 ABCA4P78363 2273 aa5.86□□□□□ -1.47
LINC00559-201ENST00000569476 PRRC2AP48634 2157 aaKnown RBP5.86□□□□□ -1.47
LINC00559-201ENST00000569476 RHODO00212 210 aa5.86□□□□□ -1.47
LINC00559-201ENST00000569476 GTF2H5Q6ZYL4 71 aa5.86□□□□□ -1.47
LINC00559-201ENST00000569476 A8MWV9 139 aa5.85□□□□□ -1.47
LINC00559-201ENST00000569476 OR5A1Q8NGJ0 315 aa5.85□□□□□ -1.47
LINC00559-201ENST00000569476 DKK2Q9UBU2 259 aa5.85□□□□□ -1.47
LINC00559-201ENST00000569476 E9PLD3 99 aa5.85□□□□□ -1.47
LINC00559-201ENST00000569476 HOXA3O43365 443 aaPredicted RBP5.85□□□□□ -1.47
LINC00559-201ENST00000569476 SUMO4Q6EEV6 95 aa5.85□□□□□ -1.47
LINC00559-201ENST00000569476 C2orf66Q6UXQ4 117 aa5.85□□□□□ -1.47
LINC00559-201ENST00000569476 KRTAP1-3Q8IUG1 177 aa5.85□□□□□ -1.47
LINC00559-201ENST00000569476 PYGO1Q9Y3Y4 419 aa5.85□□□□□ -1.47
LINC00559-201ENST00000569476 PCNX1Q96RV3 2341 aa5.85□□□□□ -1.47
LINC00559-201ENST00000569476 MUC21A0A0G2JKD1 596 aa5.84□□□□□ -1.47
LINC00559-201ENST00000569476 MUC21A0A140T8X8 626 aa5.84□□□□□ -1.47
LINC00559-201ENST00000569476 GATA1P15976 413 aaPredicted RBP5.84□□□□□ -1.47
LINC00559-201ENST00000569476 PTTG1IPP53801 180 aa5.84□□□□□ -1.47
LINC00559-201ENST00000569476 ZNF415Q09FC8 603 aa5.84□□□□□ -1.47
LINC00559-201ENST00000569476 MUC21Q5SSG8 566 aa5.84□□□□□ -1.47
LINC00559-201ENST00000569476 C14orf178Q8N769 122 aaPredicted RBP5.84□□□□□ -1.47
LINC00559-201ENST00000569476 CSTL1Q9H114 145 aa5.84□□□□□ -1.47
LINC00559-201ENST00000569476 ABCA2Q9BZC7 2435 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms