RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 SPINK4O60575 86 aa5.67□□□□□ -1.5
CDH13-214ENST00000569455 IGKV3-20P01619 116 aa5.67□□□□□ -1.5
CDH13-214ENST00000569455 HLA-DQA1P01909 254 aa5.67□□□□□ -1.5
CDH13-214ENST00000569455 TRGC2P03986 189 aa5.67□□□□□ -1.5
CDH13-214ENST00000569455 GZMBP10144 247 aa5.67□□□□□ -1.5
CDH13-214ENST00000569455 RAB4BP61018 213 aa5.67□□□□□ -1.5
CDH13-214ENST00000569455 MRPL54Q6P161 138 aaKnown RBP5.67□□□□□ -1.5
CDH13-214ENST00000569455 GTSF1Q8WW33 167 aa5.67□□□□□ -1.5
CDH13-214ENST00000569455 PGLYRP4Q96LB8 373 aa5.67□□□□□ -1.5
CDH13-214ENST00000569455 CLUHP3Q96NS8 147 aa5.67□□□□□ -1.5
CDH13-214ENST00000569455 GNB1LQ9BYB4 327 aa5.67□□□□□ -1.5
CDH13-214ENST00000569455 ZMAT5Q9UDW3 170 aaKnown RBP5.67□□□□□ -1.5
CDH13-214ENST00000569455 SNURFLB1AK76 121 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 F2Z2F3 143 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 H3BMM0 161 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 AMBPP02760 352 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 S100A6P06703 90 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 HBBP68871 147 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 ODF3L2Q3SX64 289 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 PRR9Q5T870 116 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 FAM159AQ6UWV7 190 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 AMTNQ6UX39 209 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 FER1L6-AS1Q8NA97 138 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 FRZBQ92765 325 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 KCNS1Q96KK3 526 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 TPPP3Q9BW30 176 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 NAGKQ9UJ70 344 aa5.66□□□□□ -1.5
CDH13-214ENST00000569455 TRAV12-3A0A0B4J271 114 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 IGKV3D-20A0A0C4DH25 116 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 A0A1B0GXF2 115 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 GRIFINA4D1Z8 144 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 IGLC6P0CF74 106 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 CTRLP40313 264 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 ASIPP42127 132 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 CAMPP49913 170 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 NUTF2P61970 127 aaKnown RBP5.65□□□□□ -1.5
CDH13-214ENST00000569455 FABP9Q0Z7S8 132 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 SPINK13Q1W4C9 94 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 BEAN1Q3B7T3 259 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 GFI1BQ5VTD9 330 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 LYZL1Q6UWQ5 148 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 TMEM136Q6ZRR5 245 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 STHQ8IWL8 128 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 ZFP82Q8N141 532 aa5.65□□□□□ -1.5
CDH13-214ENST00000569455 MRPL18Q9H0U6 180 aaKnown RBP5.65□□□□□ -1.5
CDH13-214ENST00000569455 M0R2Z0 102 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 INSP01308 110 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 APCSP02743 223 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 OR5AL1P0C617 328 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 ARMS2P0C7Q2 107 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 TRGC1P0CF51 173 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 MED14OSP0DP75 135 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 S100A4P26447 101 aaKnown RBP5.64□□□□□ -1.51
CDH13-214ENST00000569455 CACNG7P62955 275 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 ANXA2RQ3ZCQ2 193 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 MUC21Q5SSG8 566 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 DNLZQ5SXM8 178 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 GTSCR1Q86UQ5 136 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 C20orf144Q9BQM9 153 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 C11orf21Q9P2W6 132 aa5.64□□□□□ -1.51
CDH13-214ENST00000569455 TRGV11A0A075B6L2 103 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 TRAV12-2A0A075B6T6 113 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 IGHV1OR15-1A0A075B7D0 117 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 HIST1H2BKO60814 126 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 HIST1H2BJP06899 126 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 CD7P09564 240 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 HIST1H2BOP23527 126 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 HIST1H2BBP33778 126 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 HIST1H2BDP58876 126 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 HIST1H2BCP62807 126 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 KIR3DS1Q14943 382 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 TWIST1Q15672 202 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 ZNF124Q15973 351 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 HIST2H2BEQ16778 126 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 TDRG1Q3Y452 100 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.63□□□□□ -1.51
CDH13-214ENST00000569455 SMIM15Q7Z3B0 74 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 TRPT1Q86TN4 253 aaKnown RBP5.63□□□□□ -1.51
CDH13-214ENST00000569455 GATD1Q8NB37 220 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 HIST1H2BHQ93079 126 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 HIST1H2BNQ99877 126 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 HIST1H2BMQ99879 126 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 SSBP4Q9BWG4 385 aaPredicted RBP5.63□□□□□ -1.51
CDH13-214ENST00000569455 CNFNQ9BYD5 112 aa5.63□□□□□ -1.51
CDH13-214ENST00000569455 DNAH3Q8TD57 4116 aa5.62□□□□□ -1.51
CDH13-214ENST00000569455 RBMY1BA6NDE4 496 aaKnown RBP5.62□□□□□ -1.51
CDH13-214ENST00000569455 RBMY1EA6NEQ0 496 aaKnown RBP5.62□□□□□ -1.51
CDH13-214ENST00000569455 H3BVH4 76 aa5.62□□□□□ -1.51
CDH13-214ENST00000569455 PHOX2AO14813 284 aa5.62□□□□□ -1.51
CDH13-214ENST00000569455 SNAI2O43623 268 aa5.62□□□□□ -1.51
CDH13-214ENST00000569455 ZNF324O75467 553 aaPredicted RBP5.62□□□□□ -1.51
CDH13-214ENST00000569455 RBMY1DP0C7P1 496 aaKnown RBP5.62□□□□□ -1.51
CDH13-214ENST00000569455 FRMD6-AS1P0C7T7 363 aa5.62□□□□□ -1.51
CDH13-214ENST00000569455 FXYD7P58549 80 aa5.62□□□□□ -1.51
CDH13-214ENST00000569455 SPANXN1Q5VSR9 72 aa5.62□□□□□ -1.51
CDH13-214ENST00000569455 MORN3Q6PF18 240 aaPredicted RBP5.62□□□□□ -1.51
CDH13-214ENST00000569455 Q6ZQT7 251 aa5.62□□□□□ -1.51
CDH13-214ENST00000569455 ZNF493Q6ZR52 646 aa5.62□□□□□ -1.51
CDH13-214ENST00000569455 C1QTNF4Q9BXJ3 329 aa5.62□□□□□ -1.51
CDH13-214ENST00000569455 PHLDA3Q9Y5J5 127 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms