RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 C19orf54Q5BKX5 351 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 GPHB5Q86YW7 130 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 RNF182Q8N6D2 247 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 POM121L12Q8N7R1 296 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 RNASE8Q8TDE3 154 aaKnown RBP5.83□□□□□ -1.48
ATXN3-250ENST00000568290 TIMM17AQ99595 171 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 CCL19Q99731 98 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 DKK2Q9UBU2 259 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 HHLA3Q9XRX5 114 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 PRRC2CQ9Y520 2896 aaKnown RBP5.82□□□□□ -1.48
ATXN3-250ENST00000568290 TRGV11A0A075B6L2 103 aa5.82□□□□□ -1.48
ATXN3-250ENST00000568290 PRAC2D3DTV9 90 aa5.82□□□□□ -1.48
ATXN3-250ENST00000568290 E9PLD3 99 aa5.82□□□□□ -1.48
ATXN3-250ENST00000568290 G3V318 75 aa5.82□□□□□ -1.48
ATXN3-250ENST00000568290 HOXA3O43365 443 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-250ENST00000568290 NXPH4O95158 308 aa5.82□□□□□ -1.48
ATXN3-250ENST00000568290 HLA-DMBP28068 263 aa5.82□□□□□ -1.48
ATXN3-250ENST00000568290 RHOHQ15669 191 aa5.82□□□□□ -1.48
ATXN3-250ENST00000568290 SCGB1D4Q6XE38 83 aa5.82□□□□□ -1.48
ATXN3-250ENST00000568290 GTSCR1Q86UQ5 136 aa5.82□□□□□ -1.48
ATXN3-250ENST00000568290 MTURNQ8N3F0 131 aa5.82□□□□□ -1.48
ATXN3-250ENST00000568290 ZNF479Q96JC4 524 aa5.82□□□□□ -1.48
ATXN3-250ENST00000568290 MCRIP2Q9BUT9 160 aaKnown RBP5.82□□□□□ -1.48
ATXN3-250ENST00000568290 MRPL35Q9NZE8 188 aaKnown RBP5.82□□□□□ -1.48
ATXN3-250ENST00000568290 MSRB1Q9NZV6 116 aa5.82□□□□□ -1.48
ATXN3-250ENST00000568290 MAP1BP46821 2468 aaKnown RBP5.82□□□□□ -1.48
ATXN3-250ENST00000568290 FRYLO94915 3013 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 IGHV3-35A0A0C4DH35 117 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 A6NDX4 124 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 G3V4G9 280 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 MGPP08493 103 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 CRYBA4P53673 196 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 SMAGPQ0VAQ4 97 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 SRSF9Q13242 221 aaKnown RBP eCLIP5.81□□□□□ -1.48
ATXN3-250ENST00000568290 PMVKQ15126 192 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 IGFL4Q6B9Z1 124 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 C2orf66Q6UXQ4 117 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 FOXI2Q6ZQN5 318 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 PCP2Q8IVA1 136 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 ZFAND2AQ8N6M9 145 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 NEXN-AS1Q8NBZ9 246 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 C10orf105Q8TEF2 133 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 RAB37Q96AX2 223 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 FAM19A4Q96LR4 140 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 RHPN1-AS1Q9BWJ2 59 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 NHP2Q9NX24 153 aaKnown RBP5.81□□□□□ -1.48
ATXN3-250ENST00000568290 ACACAQ13085 2346 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 PKDREJQ9NTG1 2253 aa5.81□□□□□ -1.48
ATXN3-250ENST00000568290 CFAP54Q96N23 3096 aa5.8□□□□□ -1.48
ATXN3-250ENST00000568290 POLEQ07864 2286 aa5.8□□□□□ -1.48
ATXN3-250ENST00000568290 TRBV20-1A0A075B6N2 111 aa5.8□□□□□ -1.48
ATXN3-250ENST00000568290 IGHV3-66A0A0C4DH42 116 aa5.8□□□□□ -1.48
ATXN3-250ENST00000568290 TRBV6-5A0A0K0K1A5 114 aa5.8□□□□□ -1.48
ATXN3-250ENST00000568290 SOCS3O14543 225 aa5.8□□□□□ -1.48
ATXN3-250ENST00000568290 MSMBP08118 114 aa5.8□□□□□ -1.48
ATXN3-250ENST00000568290 PPIFP30405 207 aaKnown RBP5.8□□□□□ -1.48
ATXN3-250ENST00000568290 RNASE4P34096 147 aaKnown RBP5.8□□□□□ -1.48
ATXN3-250ENST00000568290 ANXA2RQ3ZCQ2 193 aa5.8□□□□□ -1.48
ATXN3-250ENST00000568290 PIK3CD-AS1Q5SR53 167 aa5.8□□□□□ -1.48
ATXN3-250ENST00000568290 NEGR1Q7Z3B1 354 aa5.8□□□□□ -1.48
ATXN3-250ENST00000568290 TRPT1Q86TN4 253 aaKnown RBP5.8□□□□□ -1.48
ATXN3-250ENST00000568290 CEP250Q9BV73 2442 aa5.8□□□□□ -1.48
ATXN3-250ENST00000568290 USP34Q70CQ2 3546 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 TRAV2A0A0B4J234 112 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 A0A1B0GWB2 263 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 C11orf86A6NJI1 115 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 KLLNB2CW77 178 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 F5H697 171 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 H3BUX3 64 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 LGALS9O00182 355 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 PLXNB1O43157 2135 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 ELANEP08246 267 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 ATP5J2P56134 94 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 C12orf74Q32Q52 190 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 GAGE13Q4V321 117 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 RNF152Q8N8N0 203 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 ATP6V0E2Q8NHE4 81 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 COPS9Q8WXC6 57 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 JMJD8Q96S16 334 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 CSTL1Q9H114 145 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 PRORYQ9H606 182 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 TP73-AS1Q9UF72 201 aa5.79□□□□□ -1.48
ATXN3-250ENST00000568290 IGHV3OR16-13A0A075B7E8 117 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 IGHV3OR16-8A0A075B7F1 116 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-250ENST00000568290 IGHV3-74A0A0B4J1X5 117 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 ZNF815PA8K554 130 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 IGLL5B9A064 214 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 IGHV4-39P01824 125 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 ROS1P08922 2347 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 LGALS3P17931 250 aaKnown RBP5.78□□□□□ -1.48
ATXN3-250ENST00000568290 RIPPLY3P57055 190 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 FXYD7P58549 80 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 RPL24P83731 157 aaKnown RBP5.78□□□□□ -1.48
ATXN3-250ENST00000568290 RRN3P1Q2M238 152 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 PRR31Q5SQ13 230 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 Q6ZVH6 145 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 TMEM219Q86XT9 240 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 C14orf178Q8N769 122 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-250ENST00000568290 RASL10AQ92737 203 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms