RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 C11orf21Q9P2W6 132 aa9.17□□□□□ -0.94
CNOT1-213ENST00000568158 ARL2-SNX15V9GYD0 113 aa9.17□□□□□ -0.94
CNOT1-213ENST00000568158 RYR2Q92736 4967 aa9.16□□□□□ -0.94
CNOT1-213ENST00000568158 TRGV1A0A0A0MS02 117 aa9.16□□□□□ -0.94
CNOT1-213ENST00000568158 TRAV1-1A0A0B4J248 108 aa9.16□□□□□ -0.94
CNOT1-213ENST00000568158 FBLL1A6NHQ2 334 aaKnown RBP9.16□□□□□ -0.94
CNOT1-213ENST00000568158 SPINK4O60575 86 aa9.16□□□□□ -0.94
CNOT1-213ENST00000568158 ATP5G1P05496 136 aa9.16□□□□□ -0.94
CNOT1-213ENST00000568158 PPT1P50897 306 aa9.16□□□□□ -0.94
CNOT1-213ENST00000568158 IBA57Q5T440 356 aaKnown RBP9.16□□□□□ -0.94
CNOT1-213ENST00000568158 TMEM88Q6PEY1 159 aa9.16□□□□□ -0.94
CNOT1-213ENST00000568158 NDUFAF3Q9BU61 184 aa9.16□□□□□ -0.94
CNOT1-213ENST00000568158 HYDINQ4G0P3 5121 aa9.15□□□□□ -0.94
CNOT1-213ENST00000568158 ZNF415Q09FC8 603 aa9.15□□□□□ -0.94
CNOT1-213ENST00000568158 LGALS9CQ6DKI2 356 aa9.15□□□□□ -0.94
CNOT1-213ENST00000568158 ALKAL2Q6UX46 152 aa9.15□□□□□ -0.94
CNOT1-213ENST00000568158 MRPL16Q9NX20 251 aaKnown RBP9.15□□□□□ -0.94
CNOT1-213ENST00000568158 GNG13Q9P2W3 67 aa9.15□□□□□ -0.94
CNOT1-213ENST00000568158 TRGV11A0A075B6L2 103 aa9.14□□□□□ -0.95
CNOT1-213ENST00000568158 SCO2A0A1W2PP80 73 aa9.14□□□□□ -0.95
CNOT1-213ENST00000568158 TYMSP04818 313 aa9.14□□□□□ -0.95
CNOT1-213ENST00000568158 AKR1C3P42330 323 aa9.14□□□□□ -0.95
CNOT1-213ENST00000568158 CRIP1P50238 77 aa9.14□□□□□ -0.95
CNOT1-213ENST00000568158 UBE2G1P62253 170 aa9.14□□□□□ -0.95
CNOT1-213ENST00000568158 OR5I1Q13606 314 aa9.14□□□□□ -0.95
CNOT1-213ENST00000568158 TDRG1Q3Y452 100 aa9.14□□□□□ -0.95
CNOT1-213ENST00000568158 Q86TA4 180 aa9.14□□□□□ -0.95
CNOT1-213ENST00000568158 FAM210BQ96KR6 192 aa9.14□□□□□ -0.95
CNOT1-213ENST00000568158 NACAE9PAV3 2078 aa9.13□□□□□ -0.95
CNOT1-213ENST00000568158 TRGV2A0A075B6R0 118 aa9.13□□□□□ -0.95
CNOT1-213ENST00000568158 IGHV3-16A0A0C4DH30 117 aa9.13□□□□□ -0.95
CNOT1-213ENST00000568158 FABP5P3A8MUU1 101 aa9.13□□□□□ -0.95
CNOT1-213ENST00000568158 TEX46H3BTG2 121 aa9.13□□□□□ -0.95
CNOT1-213ENST00000568158 PFN1P07737 140 aaKnown RBP9.13□□□□□ -0.95
CNOT1-213ENST00000568158 HOXA5P20719 270 aa9.13□□□□□ -0.95
CNOT1-213ENST00000568158 ZC2HC1AQ96GY0 325 aa9.13□□□□□ -0.95
CNOT1-213ENST00000568158 FMC1Q96HJ9 113 aa9.13□□□□□ -0.95
CNOT1-213ENST00000568158 KCNS1Q96KK3 526 aa9.13□□□□□ -0.95
CNOT1-213ENST00000568158 SDF2L1Q9HCN8 221 aa9.13□□□□□ -0.95
CNOT1-213ENST00000568158 ZFP30Q9Y2G7 519 aa9.13□□□□□ -0.95
CNOT1-213ENST00000568158 VPS13DQ5THJ4 4388 aa9.12□□□□□ -0.95
CNOT1-213ENST00000568158 TRBV6-1A0A0K0K1D8 114 aa9.12□□□□□ -0.95
CNOT1-213ENST00000568158 IGHV3-53P01767 116 aa9.12□□□□□ -0.95
CNOT1-213ENST00000568158 LGALS9BQ3B8N2 356 aa9.12□□□□□ -0.95
CNOT1-213ENST00000568158 TCEAL7Q9BRU2 100 aa9.12□□□□□ -0.95
CNOT1-213ENST00000568158 SPXQ9BT56 116 aa9.12□□□□□ -0.95
CNOT1-213ENST00000568158 MANBALQ9NQG1 85 aa9.12□□□□□ -0.95
CNOT1-213ENST00000568158 IGKV3D-20A0A0C4DH25 116 aa9.11□□□□□ -0.95
CNOT1-213ENST00000568158 A0A0J9YY99 117 aa9.11□□□□□ -0.95
CNOT1-213ENST00000568158 NUDT3O95989 172 aa9.11□□□□□ -0.95
CNOT1-213ENST00000568158 LTAP01374 205 aa9.11□□□□□ -0.95
CNOT1-213ENST00000568158 NHLRC2Q8NBF2 726 aa9.11□□□□□ -0.95
CNOT1-213ENST00000568158 S100A9P06702 114 aaKnown RBP9.1□□□□□ -0.95
CNOT1-213ENST00000568158 COX8CQ7Z4L0 72 aa9.1□□□□□ -0.95
CNOT1-213ENST00000568158 BAGE2Q86Y30 109 aa9.1□□□□□ -0.95
CNOT1-213ENST00000568158 RASL10AQ92737 203 aa9.1□□□□□ -0.95
CNOT1-213ENST00000568158 C18orf15Q96N68 181 aa9.1□□□□□ -0.95
CNOT1-213ENST00000568158 MUC4Q99102 2169 aa9.1□□□□□ -0.95
CNOT1-213ENST00000568158 TRAV26-1A0A087WT03 109 aa9.09□□□□□ -0.95
CNOT1-213ENST00000568158 M0R2P5 195 aa9.09□□□□□ -0.95
CNOT1-213ENST00000568158 SH2D1AO60880 128 aa9.09□□□□□ -0.95
CNOT1-213ENST00000568158 ORM1P02763 201 aa9.09□□□□□ -0.95
CNOT1-213ENST00000568158 SFTA3P0C7M3 94 aa9.09□□□□□ -0.95
CNOT1-213ENST00000568158 BLOC1S1P78537 153 aa9.09□□□□□ -0.95
CNOT1-213ENST00000568158 ZNF674Q2M3X9 581 aa9.09□□□□□ -0.95
CNOT1-213ENST00000568158 ZNF575Q86XF7 245 aa9.09□□□□□ -0.95
CNOT1-213ENST00000568158 POM121L12Q8N7R1 296 aa9.09□□□□□ -0.95
CNOT1-213ENST00000568158 C15orf53Q8NAA6 179 aa9.09□□□□□ -0.95
CNOT1-213ENST00000568158 DERL1Q9BUN8 251 aa9.09□□□□□ -0.95
CNOT1-213ENST00000568158 RAB19A4D1S5 217 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 GRIFINA4D1Z8 144 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 PGPEP1LA6NFU8 196 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 KRBOX1C9JBD0 128 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 C9JCJ5 164 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 M0R036 132 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 IFNA1P01562 189 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 P0DMU3 169 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 FAM231AP0DMU4 169 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 FAM231CP0DMU5 169 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 RNASE3P12724 160 aaKnown RBP9.08□□□□□ -0.96
CNOT1-213ENST00000568158 RPL35P42766 123 aaKnown RBP9.08□□□□□ -0.96
CNOT1-213ENST00000568158 FHL2Q14192 279 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 VSIG2Q96IQ7 327 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 ZNF479Q96JC4 524 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 MLST8Q9BVC4 326 aa9.08□□□□□ -0.96
CNOT1-213ENST00000568158 TMSB15BA0A087X1C1 80 aa9.07□□□□□ -0.96
CNOT1-213ENST00000568158 B4DEV8 164 aa9.07□□□□□ -0.96
CNOT1-213ENST00000568158 J3QL48 77 aa9.07□□□□□ -0.96
CNOT1-213ENST00000568158 BCL2P10415 239 aa9.07□□□□□ -0.96
CNOT1-213ENST00000568158 MEF2BQ02080 365 aaPredicted RBP9.07□□□□□ -0.96
CNOT1-213ENST00000568158 FAM162BQ5T6X4 162 aa9.07□□□□□ -0.96
CNOT1-213ENST00000568158 C11orf52Q96A22 123 aa9.07□□□□□ -0.96
CNOT1-213ENST00000568158 C9orf85Q96MD7 179 aa9.07□□□□□ -0.96
CNOT1-213ENST00000568158 TXNDC17Q9BRA2 123 aa9.07□□□□□ -0.96
CNOT1-213ENST00000568158 MED9Q9NWA0 146 aa9.07□□□□□ -0.96
CNOT1-213ENST00000568158 VAX2Q9UIW0 290 aa9.07□□□□□ -0.96
CNOT1-213ENST00000568158 KMT2AQ03164 3969 aa9.07□□□□□ -0.96
CNOT1-213ENST00000568158 S100A4P26447 101 aaKnown RBP9.06□□□□□ -0.96
CNOT1-213ENST00000568158 UBE2DNLQ8IWF7 75 aa9.06□□□□□ -0.96
CNOT1-213ENST00000568158 LYPD6BQ8NI32 183 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms