RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 FABP9Q0Z7S8 132 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 ITPR2Q14571 2701 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 DEFB114Q30KQ6 69 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 EBLN2Q6P2I7 272 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 WDR73Q6P4I2 378 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 RASL11AQ6T310 242 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 ADAMTSL5Q6ZMM2 481 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 ZFP82Q8N141 532 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 NUP35Q8NFH5 326 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 OR8A1Q8NGG7 326 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 GNB1LQ9BYB4 327 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 SAV1Q9H4B6 383 aaPredicted RBP4.59□□□□□ -1.67
CAPN3-218ENST00000568153 MSRB1Q9NZV6 116 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 SELENOKQ9Y6D0 94 aa4.59□□□□□ -1.67
CAPN3-218ENST00000568153 CSMD1Q96PZ7 3565 aa4.59□□□□□ -1.68
CAPN3-218ENST00000568153 ZANQ9Y493 2812 aa4.59□□□□□ -1.68
CAPN3-218ENST00000568153 TRAV25A0A0B4J276 109 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 TRBV7-9A0A0J9YWB2 115 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 LOC105371267A0A1B0GV96 52 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 HIGD1CA8MV81 97 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 DUSP14O95147 198 aaKnown RBP4.58□□□□□ -1.68
CAPN3-218ENST00000568153 ORM1P02763 201 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 GPX1P07203 203 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 ZNF705DP0CH99 300 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-218ENST00000568153 ZNF705BP0CI00 300 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-218ENST00000568153 ZNF80P51504 273 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-218ENST00000568153 CMC4P56277 68 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-218ENST00000568153 NDUFA6P56556 154 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 RIPPLY3P57055 190 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 RAB4BP61018 213 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 NSUN5P1Q3KNT7 163 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 PSMG4Q5JS54 123 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 HIST2H2BDQ6DRA6 164 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 NDUFA11Q86Y39 141 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 NRACQ8N912 160 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 Q8TAT8 98 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 DYNLRB2Q8TF09 96 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 FRZBQ92765 325 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 PGLYRP4Q96LB8 373 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 GPR61Q9BZJ8 451 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 SIGLEC8Q9NYZ4 499 aa4.58□□□□□ -1.68
CAPN3-218ENST00000568153 MT-ND6P03923 174 aa4.57□□□□□ -1.68
CAPN3-218ENST00000568153 ZNF688P0C7X2 276 aa4.57□□□□□ -1.68
CAPN3-218ENST00000568153 TRGC1P0CF51 173 aa4.57□□□□□ -1.68
CAPN3-218ENST00000568153 RNASE4P34096 147 aaKnown RBP4.57□□□□□ -1.68
CAPN3-218ENST00000568153 SNRPEP62304 92 aaKnown RBP4.57□□□□□ -1.68
CAPN3-218ENST00000568153 RIGQ13278 110 aa4.57□□□□□ -1.68
CAPN3-218ENST00000568153 ACTL10Q5JWF8 245 aa4.57□□□□□ -1.68
CAPN3-218ENST00000568153 PIK3CD-AS1Q5SR53 167 aa4.57□□□□□ -1.68
CAPN3-218ENST00000568153 Q6AWC8 147 aa4.57□□□□□ -1.68
CAPN3-218ENST00000568153 MRPL54Q6P161 138 aaKnown RBP4.57□□□□□ -1.68
CAPN3-218ENST00000568153 ATP5L2Q7Z4Y8 100 aa4.57□□□□□ -1.68
CAPN3-218ENST00000568153 GTSF1Q8WW33 167 aa4.57□□□□□ -1.68
CAPN3-218ENST00000568153 BORCS7Q96B45 105 aa4.57□□□□□ -1.68
CAPN3-218ENST00000568153 MXRA5Q9NR99 2828 aa4.57□□□□□ -1.68
CAPN3-218ENST00000568153 SETD2Q9BYW2 2564 aaPredicted RBP4.57□□□□□ -1.68
CAPN3-218ENST00000568153 TMSB15BA0A087X1C1 80 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 TRAV21A0A0B4J279 112 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 A0A0J9YX75 114 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 A0A1B0GUT8 65 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 A0A1B0GW15 77 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 OR4C46A6NHA9 309 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 SNURFLB1AK76 121 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 F2Z2F3 143 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 F6UB75 175 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 PHOX2AO14813 284 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HIST1H2BKO60814 126 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HLA-DQA1P01909 254 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 APCSP02743 223 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 S100A8P05109 93 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HIST1H2BJP06899 126 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 FRMD6-AS1P0C7T7 363 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 GZMBP10144 247 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 CRISP2P16562 243 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HIST1H2BOP23527 126 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 TSPOP30536 169 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HIST1H2BBP33778 126 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 LEPP41159 167 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 CAMPP49913 170 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HIST1H2BDP58876 126 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 DEFB1P60022 68 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 KRTAP10-3P60369 221 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 KRTAP10-11P60412 298 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HIST1H2BCP62807 126 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HIST2H2BEQ16778 126 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.56□□□□□ -1.68
CAPN3-218ENST00000568153 LYZL1Q6UWQ5 148 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 FOXI2Q6ZQN5 318 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 TMEM136Q6ZRR5 245 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HIST1H2BHQ93079 126 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 FAM19A4Q96LR4 140 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HIST1H2BNQ99877 126 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HIST1H2BMQ99879 126 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 SPAG8Q99932 426 aaPredicted RBP4.56□□□□□ -1.68
CAPN3-218ENST00000568153 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 ZFHX3Q15911 3703 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 HIVEP2P31629 2446 aa4.56□□□□□ -1.68
CAPN3-218ENST00000568153 GRIFINA4D1Z8 144 aa4.55□□□□□ -1.68
CAPN3-218ENST00000568153 C5orf52A6NGY3 159 aa4.55□□□□□ -1.68
CAPN3-218ENST00000568153 J3KRW8 73 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms