RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 LINC01620Q4KN68 170 aa10.27□□□□□ -0.77
PALB2-205ENST00000567003 Q6ZSA8 131 aa10.27□□□□□ -0.77
PALB2-205ENST00000567003 C2orf50Q96LR7 162 aa10.27□□□□□ -0.77
PALB2-205ENST00000567003 M0R2P5 195 aa10.26□□□□□ -0.77
PALB2-205ENST00000567003 DEFB104AQ8WTQ1 72 aa10.26□□□□□ -0.77
PALB2-205ENST00000567003 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.25□□□□□ -0.77
PALB2-205ENST00000567003 TRAV8-6A0A0B4J262 113 aa10.25□□□□□ -0.77
PALB2-205ENST00000567003 EIF3GO75821 320 aaKnown RBP eCLIP10.25□□□□□ -0.77
PALB2-205ENST00000567003 GHRHP01286 108 aa10.25□□□□□ -0.77
PALB2-205ENST00000567003 C1QBP02746 253 aa10.25□□□□□ -0.77
PALB2-205ENST00000567003 IL7P13232 177 aa10.25□□□□□ -0.77
PALB2-205ENST00000567003 CSN1S1P47710 185 aa10.25□□□□□ -0.77
PALB2-205ENST00000567003 NHLH2Q02577 135 aa10.25□□□□□ -0.77
PALB2-205ENST00000567003 ATP6V1FQ16864 119 aa10.25□□□□□ -0.77
PALB2-205ENST00000567003 IGHV3-73A0A0B4J1V6 119 aa10.24□□□□□ -0.77
PALB2-205ENST00000567003 RBAKDNA6NC62 111 aa10.24□□□□□ -0.77
PALB2-205ENST00000567003 DIRC3C9JPN6 131 aa10.24□□□□□ -0.77
PALB2-205ENST00000567003 F6UZH7 168 aa10.24□□□□□ -0.77
PALB2-205ENST00000567003 PLA2G10O15496 165 aa10.24□□□□□ -0.77
PALB2-205ENST00000567003 OR7C2O60412 319 aa10.24□□□□□ -0.77
PALB2-205ENST00000567003 TYMSP04818 313 aa10.24□□□□□ -0.77
PALB2-205ENST00000567003 IL15RAQ13261 267 aa10.24□□□□□ -0.77
PALB2-205ENST00000567003 SH2D6Q7Z4S9 175 aa10.24□□□□□ -0.77
PALB2-205ENST00000567003 SLC25A29Q8N8R3 303 aa10.24□□□□□ -0.77
PALB2-205ENST00000567003 RPH3ALQ9UNE2 315 aa10.24□□□□□ -0.77
PALB2-205ENST00000567003 UBE2L3P68036 154 aaKnown RBP10.23□□□□□ -0.77
PALB2-205ENST00000567003 TDRG1Q3Y452 100 aa10.23□□□□□ -0.77
PALB2-205ENST00000567003 DPPA3Q6W0C5 159 aa10.23□□□□□ -0.77
PALB2-205ENST00000567003 SCXQ7RTU7 201 aa10.23□□□□□ -0.77
PALB2-205ENST00000567003 OR5C1Q8NGR4 320 aa10.23□□□□□ -0.77
PALB2-205ENST00000567003 HYLS1Q96M11 299 aa10.23□□□□□ -0.77
PALB2-205ENST00000567003 RBM38Q9H0Z9 239 aaKnown RBP10.23□□□□□ -0.77
PALB2-205ENST00000567003 FBLL1A6NHQ2 334 aaKnown RBP10.22□□□□□ -0.77
PALB2-205ENST00000567003 TCRBP04435 133 aa10.22□□□□□ -0.77
PALB2-205ENST00000567003 KRTAP10-4P60372 401 aaPredicted RBP10.22□□□□□ -0.77
PALB2-205ENST00000567003 LELP1Q5T871 98 aa10.22□□□□□ -0.77
PALB2-205ENST00000567003 LYRM1O43325 122 aa10.21□□□□□ -0.77
PALB2-205ENST00000567003 PFN1P07737 140 aaKnown RBP10.21□□□□□ -0.77
PALB2-205ENST00000567003 CNPY1Q3B7I2 92 aa10.21□□□□□ -0.77
PALB2-205ENST00000567003 SERTAD4-AS1Q5TG53 156 aa10.21□□□□□ -0.77
PALB2-205ENST00000567003 SYT8Q8NBV8 401 aa10.21□□□□□ -0.77
PALB2-205ENST00000567003 TVP23CQ96ET8 276 aa10.21□□□□□ -0.77
PALB2-205ENST00000567003 NUDT15Q9NV35 164 aa10.21□□□□□ -0.77
PALB2-205ENST00000567003 CFAP126Q5VTH2 177 aa10.2□□□□□ -0.78
PALB2-205ENST00000567003 BAALCQ8WXS3 180 aa10.2□□□□□ -0.78
PALB2-205ENST00000567003 PRADC1Q9BSG0 188 aa10.2□□□□□ -0.78
PALB2-205ENST00000567003 TM2D2Q9BX73 214 aa10.2□□□□□ -0.78
PALB2-205ENST00000567003 LENEPQ9Y5L5 61 aa10.2□□□□□ -0.78
PALB2-205ENST00000567003 TRAV8-1A0A0A6YYK1 113 aa10.19□□□□□ -0.78
PALB2-205ENST00000567003 TRAV21A0A0B4J279 112 aa10.19□□□□□ -0.78
PALB2-205ENST00000567003 RS1O15537 224 aa10.19□□□□□ -0.78
PALB2-205ENST00000567003 LAGE3Q14657 143 aa10.19□□□□□ -0.78
PALB2-205ENST00000567003 RHOHQ15669 191 aa10.19□□□□□ -0.78
PALB2-205ENST00000567003 GOLT1AQ6ZVE7 132 aa10.19□□□□□ -0.78
PALB2-205ENST00000567003 WDR61Q9GZS3 305 aaKnown RBP10.19□□□□□ -0.78
PALB2-205ENST00000567003 SDF2L1Q9HCN8 221 aa10.19□□□□□ -0.78
PALB2-205ENST00000567003 OR5AC2Q9NZP5 309 aa10.19□□□□□ -0.78
PALB2-205ENST00000567003 SIX6O95475 246 aa10.18□□□□□ -0.78
PALB2-205ENST00000567003 ZNF876PQ49A33 203 aa10.18□□□□□ -0.78
PALB2-205ENST00000567003 DAZ4Q86SG3 579 aaKnown RBP10.18□□□□□ -0.78
PALB2-205ENST00000567003 ATP6V0E2Q8NHE4 81 aa10.18□□□□□ -0.78
PALB2-205ENST00000567003 ASB13Q8WXK3 278 aa10.18□□□□□ -0.78
PALB2-205ENST00000567003 DNAJC30Q96LL9 226 aa10.18□□□□□ -0.78
PALB2-205ENST00000567003 GTSF1LQ9H1H1 148 aa10.18□□□□□ -0.78
PALB2-205ENST00000567003 DAZ3Q9NR90 486 aaKnown RBP10.18□□□□□ -0.78
PALB2-205ENST00000567003 PLA2G2DQ9UNK4 145 aa10.18□□□□□ -0.78
PALB2-205ENST00000567003 PGPA6NDG6 321 aa10.17□□□□□ -0.78
PALB2-205ENST00000567003 H2AFB2P0C5Z0 115 aa10.17□□□□□ -0.78
PALB2-205ENST00000567003 LORP23490 312 aaPredicted RBP10.17□□□□□ -0.78
PALB2-205ENST00000567003 GNG5P63218 68 aa10.17□□□□□ -0.78
PALB2-205ENST00000567003 FFAR4Q5NUL3 377 aa10.17□□□□□ -0.78
PALB2-205ENST00000567003 TMED6Q8WW62 240 aa10.17□□□□□ -0.78
PALB2-205ENST00000567003 SGK494Q96LW2 274 aa10.17□□□□□ -0.78
PALB2-205ENST00000567003 TREM1Q9NP99 234 aa10.17□□□□□ -0.78
PALB2-205ENST00000567003 OTORQ9NRC9 128 aa10.17□□□□□ -0.78
PALB2-205ENST00000567003 C11orf21Q9P2W6 132 aa10.17□□□□□ -0.78
PALB2-205ENST00000567003 TRBV6-4A0A1B0GX49 114 aa10.16□□□□□ -0.78
PALB2-205ENST00000567003 H0YIZ8 118 aa10.16□□□□□ -0.78
PALB2-205ENST00000567003 LRRC37A5PQ49AS3 106 aa10.16□□□□□ -0.78
PALB2-205ENST00000567003 KHDC3LQ587J8 217 aa10.16□□□□□ -0.78
PALB2-205ENST00000567003 TMEM75Q8N9X5 138 aa10.16□□□□□ -0.78
PALB2-205ENST00000567003 CMTM2Q8TAZ6 248 aa10.16□□□□□ -0.78
PALB2-205ENST00000567003 NMES1Q9C002 83 aa10.16□□□□□ -0.78
PALB2-205ENST00000567003 KCNIP2Q9NS61 270 aa10.16□□□□□ -0.78
PALB2-205ENST00000567003 GAGE12JA6NER3 117 aa10.15□□□□□ -0.78
PALB2-205ENST00000567003 ZNF80P51504 273 aaPredicted RBP10.15□□□□□ -0.78
PALB2-205ENST00000567003 GAGE1Q13065 139 aa10.15□□□□□ -0.78
PALB2-205ENST00000567003 GAGE4Q13068 117 aa10.15□□□□□ -0.78
PALB2-205ENST00000567003 GAGE5Q13069 117 aa10.15□□□□□ -0.78
PALB2-205ENST00000567003 GAGE13Q4V321 117 aa10.15□□□□□ -0.78
PALB2-205ENST00000567003 ZNF506Q5JVG8 444 aa10.15□□□□□ -0.78
PALB2-205ENST00000567003 CIRBP-AS1Q8TBR5 109 aa10.15□□□□□ -0.78
PALB2-205ENST00000567003 ATP5SQ99766 215 aa10.15□□□□□ -0.78
PALB2-205ENST00000567003 CHAC1Q9BUX1 264 aa10.15□□□□□ -0.78
PALB2-205ENST00000567003 Q9UF83 564 aa10.15□□□□□ -0.78
PALB2-205ENST00000567003 TRAV8-3A0A0A6YYJ7 113 aa10.14□□□□□ -0.79
PALB2-205ENST00000567003 TMEM238LA0A1B0GVL6 79 aa10.14□□□□□ -0.79
PALB2-205ENST00000567003 RBFOX3A6NFN3 312 aa10.14□□□□□ -0.79
PALB2-205ENST00000567003 PGPEP1LA6NFU8 196 aa10.14□□□□□ -0.79
PALB2-205ENST00000567003 C17orf112F2Z3M2 114 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms