RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 FOXE3Q13461 319 aa12.8□□□□□ -0.36
CMTM3-213ENST00000566756 GLMPQ8WWB7 406 aa12.8□□□□□ -0.36
CMTM3-213ENST00000566756 HIGD1BQ9P298 99 aa12.8□□□□□ -0.36
CMTM3-213ENST00000566756 CENPEQ02224 2701 aa12.8□□□□□ -0.36
CMTM3-213ENST00000566756 LINC01548A6NM66 108 aa12.8□□□□□ -0.36
CMTM3-213ENST00000566756 DKK2Q9UBU2 259 aa12.8□□□□□ -0.36
CMTM3-213ENST00000566756 TRAV8-6A0A0B4J262 113 aa12.79□□□□□ -0.36
CMTM3-213ENST00000566756 IGHV3-66A0A0C4DH42 116 aa12.79□□□□□ -0.36
CMTM3-213ENST00000566756 C9orf118A6NHY6 69 aa12.79□□□□□ -0.36
CMTM3-213ENST00000566756 J3QLI3 93 aa12.78□□□□□ -0.36
CMTM3-213ENST00000566756 GAS8-AS1O95177 125 aa12.78□□□□□ -0.36
CMTM3-213ENST00000566756 NRACQ8N912 160 aa12.78□□□□□ -0.36
CMTM3-213ENST00000566756 MRAP2Q96G30 205 aa12.78□□□□□ -0.36
CMTM3-213ENST00000566756 LINC00477Q96M19 166 aa12.78□□□□□ -0.36
CMTM3-213ENST00000566756 HHLA3Q9XRX5 114 aa12.78□□□□□ -0.36
CMTM3-213ENST00000566756 CELSR2Q9HCU4 2923 aa12.78□□□□□ -0.36
CMTM3-213ENST00000566756 POLQO75417 2590 aa12.78□□□□□ -0.36
CMTM3-213ENST00000566756 H3BUA1 57 aa12.78□□□□□ -0.36
CMTM3-213ENST00000566756 IGHV4-38-2P0DP08 117 aa12.78□□□□□ -0.36
CMTM3-213ENST00000566756 TMEM158Q8WZ71 300 aa12.78□□□□□ -0.36
CMTM3-213ENST00000566756 IGKCP01834 107 aa12.77□□□□□ -0.37
CMTM3-213ENST00000566756 PPIFP30405 207 aaKnown RBP12.77□□□□□ -0.37
CMTM3-213ENST00000566756 BRD3OSQ6XYD6 125 aa12.77□□□□□ -0.37
CMTM3-213ENST00000566756 C16orf92Q96LL3 132 aa12.77□□□□□ -0.37
CMTM3-213ENST00000566756 CR1P17927 2039 aa12.77□□□□□ -0.37
CMTM3-213ENST00000566756 ABCA12Q86UK0 2595 aa12.77□□□□□ -0.37
CMTM3-213ENST00000566756 NDUFA4O00483 81 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 NMUP48645 174 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 LAGE3Q14657 143 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 GTF2H5Q6ZYL4 71 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 C18orf15Q96N68 181 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 AP1S3Q96PC3 154 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 CST9LQ9H4G1 147 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 NAV2Q8IVL1 2488 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 TENM4Q6N022 2769 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 IGHV3OR16-10A0A075B7F0 116 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 OVOL1O14753 267 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 DPM2O94777 84 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 TRGV3P03979 118 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 IGF1P05019 195 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 PRSS1P07477 247 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 ERASQ7Z444 233 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 PCP2Q8IVA1 136 aa12.76□□□□□ -0.37
CMTM3-213ENST00000566756 VPS13CQ709C8 3753 aa12.75□□□□□ -0.37
CMTM3-213ENST00000566756 IGHV3OR16-13A0A075B7E8 117 aa12.75□□□□□ -0.37
CMTM3-213ENST00000566756 IGHV3-74A0A0B4J1X5 117 aa12.75□□□□□ -0.37
CMTM3-213ENST00000566756 K7EMI3 77 aa12.75□□□□□ -0.37
CMTM3-213ENST00000566756 AVPP01185 164 aa12.75□□□□□ -0.37
CMTM3-213ENST00000566756 SMIM17P0DL12 118 aa12.75□□□□□ -0.37
CMTM3-213ENST00000566756 MED14OSP0DP75 135 aa12.75□□□□□ -0.37
CMTM3-213ENST00000566756 GATA1P15976 413 aaPredicted RBP12.75□□□□□ -0.37
CMTM3-213ENST00000566756 ARL3P36405 182 aa12.75□□□□□ -0.37
CMTM3-213ENST00000566756 Q5PR19 223 aa12.75□□□□□ -0.37
CMTM3-213ENST00000566756 SPANXN1Q5VSR9 72 aa12.75□□□□□ -0.37
CMTM3-213ENST00000566756 UFSP1Q6NVU6 142 aa12.75□□□□□ -0.37
CMTM3-213ENST00000566756 USMG5Q96IX5 58 aa12.75□□□□□ -0.37
CMTM3-213ENST00000566756 TRBV7-9A0A0J9YWB2 115 aa12.74□□□□□ -0.37
CMTM3-213ENST00000566756 MYOZ3Q8TDC0 251 aa12.74□□□□□ -0.37
CMTM3-213ENST00000566756 GAGE10A6NGK3 116 aa12.74□□□□□ -0.37
CMTM3-213ENST00000566756 ZNF207O43670 478 aaKnown RBP12.74□□□□□ -0.37
CMTM3-213ENST00000566756 WFDC3Q8IUB2 231 aa12.74□□□□□ -0.37
CMTM3-213ENST00000566756 IGHV3-49A0A0A0MS15 119 aa12.73□□□□□ -0.37
CMTM3-213ENST00000566756 TRAV21A0A0B4J279 112 aa12.73□□□□□ -0.37
CMTM3-213ENST00000566756 GAGE12BA1L429 117 aa12.73□□□□□ -0.37
CMTM3-213ENST00000566756 RNF223E7ERA6 249 aa12.73□□□□□ -0.37
CMTM3-213ENST00000566756 SOCS3O14543 225 aa12.73□□□□□ -0.37
CMTM3-213ENST00000566756 PRRC2AP48634 2157 aaKnown RBP12.73□□□□□ -0.37
CMTM3-213ENST00000566756 OCIAD2Q56VL3 154 aa12.73□□□□□ -0.37
CMTM3-213ENST00000566756 FOXC2Q99958 501 aa12.73□□□□□ -0.37
CMTM3-213ENST00000566756 APRG1Q8IVJ8 170 aa12.72□□□□□ -0.37
CMTM3-213ENST00000566756 OR10J6PQ8NGY7 276 aa12.72□□□□□ -0.37
CMTM3-213ENST00000566756 APCP25054 2843 aa12.72□□□□□ -0.37
CMTM3-213ENST00000566756 HELZ2Q9BYK8 2649 aaKnown RBP12.72□□□□□ -0.37
CMTM3-213ENST00000566756 TGFAP01135 160 aa12.72□□□□□ -0.37
CMTM3-213ENST00000566756 TMEM219Q86XT9 240 aa12.72□□□□□ -0.37
CMTM3-213ENST00000566756 KRTAP1-3Q8IUG1 177 aa12.72□□□□□ -0.37
CMTM3-213ENST00000566756 ZFAND2AQ8N6M9 145 aa12.72□□□□□ -0.37
CMTM3-213ENST00000566756 UFC1Q9Y3C8 167 aa12.72□□□□□ -0.37
CMTM3-213ENST00000566756 MAP1AP78559 2803 aaPredicted RBP12.72□□□□□ -0.37
CMTM3-213ENST00000566756 TRAV12-1A0A0B4J245 112 aa12.71□□□□□ -0.37
CMTM3-213ENST00000566756 A0A0G2JLM5 398 aa12.71□□□□□ -0.37
CMTM3-213ENST00000566756 IGHV4-31P0DP07 118 aa12.71□□□□□ -0.37
CMTM3-213ENST00000566756 PCP4P48539 62 aa12.71□□□□□ -0.37
CMTM3-213ENST00000566756 GPHB5Q86YW7 130 aa12.71□□□□□ -0.37
CMTM3-213ENST00000566756 C20orf173Q96LM9 149 aa12.71□□□□□ -0.37
CMTM3-213ENST00000566756 FAM19A4Q96LR4 140 aa12.71□□□□□ -0.37
CMTM3-213ENST00000566756 C20orf78Q9BR46 151 aa12.71□□□□□ -0.37
CMTM3-213ENST00000566756 CSPG4Q6UVK1 2322 aa12.71□□□□□ -0.38
CMTM3-213ENST00000566756 A0A087WX48 190 aa12.7□□□□□ -0.38
CMTM3-213ENST00000566756 K7EP34 96 aa12.7□□□□□ -0.38
CMTM3-213ENST00000566756 IGHG2P01859 326 aa12.7□□□□□ -0.38
CMTM3-213ENST00000566756 PRR9Q5T870 116 aa12.7□□□□□ -0.38
CMTM3-213ENST00000566756 SMIM2Q9BVW6 85 aa12.7□□□□□ -0.38
CMTM3-213ENST00000566756 IGKV2D-26A0A0A0MRZ7 120 aa12.7□□□□□ -0.38
CMTM3-213ENST00000566756 H3BVH4 76 aa12.7□□□□□ -0.38
CMTM3-213ENST00000566756 M0R381 172 aa12.7□□□□□ -0.38
CMTM3-213ENST00000566756 PLNP26678 52 aa12.7□□□□□ -0.38
CMTM3-213ENST00000566756 ORMDL2Q53FV1 153 aa12.7□□□□□ -0.38
CMTM3-213ENST00000566756 A6NDX4 124 aa12.69□□□□□ -0.38
CMTM3-213ENST00000566756 PPP1R17O96001 155 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms