RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 KCNS1Q96KK3 526 aa10.15□□□□□ -0.78
RNF40-209ENST00000566703 A0A1W2PPV4 95 aa10.14□□□□□ -0.79
RNF40-209ENST00000566703 WFDC10BQ8IUB3 73 aa10.14□□□□□ -0.79
RNF40-209ENST00000566703 NAGKQ9UJ70 344 aa10.14□□□□□ -0.79
RNF40-209ENST00000566703 SERTM2A0A1B0GWG4 89 aa10.13□□□□□ -0.79
RNF40-209ENST00000566703 SSNA1O43805 119 aa10.13□□□□□ -0.79
RNF40-209ENST00000566703 GOLT1AQ6ZVE7 132 aa10.13□□□□□ -0.79
RNF40-209ENST00000566703 TVP23CQ96ET8 276 aa10.13□□□□□ -0.79
RNF40-209ENST00000566703 SMIM3Q9BZL3 60 aa10.13□□□□□ -0.79
RNF40-209ENST00000566703 SDF2L1Q9HCN8 221 aa10.13□□□□□ -0.79
RNF40-209ENST00000566703 TREM1Q9NP99 234 aa10.13□□□□□ -0.79
RNF40-209ENST00000566703 CRYGDP07320 174 aa10.12□□□□□ -0.79
RNF40-209ENST00000566703 PFN1P07737 140 aaKnown RBP10.12□□□□□ -0.79
RNF40-209ENST00000566703 GATA1P15976 413 aaPredicted RBP10.12□□□□□ -0.79
RNF40-209ENST00000566703 DNAH5Q8TE73 4624 aa10.12□□□□□ -0.79
RNF40-209ENST00000566703 APOBP04114 4563 aaKnown RBP10.12□□□□□ -0.79
RNF40-209ENST00000566703 IGHV3-38A0A0C4DH36 116 aa10.11□□□□□ -0.79
RNF40-209ENST00000566703 TYMSP04818 313 aa10.11□□□□□ -0.79
RNF40-209ENST00000566703 FUSP35637 526 aaKnown RBP eCLIP10.11□□□□□ -0.79
RNF40-209ENST00000566703 DEFA1P59665 94 aa10.11□□□□□ -0.79
RNF40-209ENST00000566703 DEFA3P59666 94 aa10.11□□□□□ -0.79
RNF40-209ENST00000566703 KRTAP10-1P60331 282 aa10.11□□□□□ -0.79
RNF40-209ENST00000566703 NDFIP1Q9BT67 221 aa10.11□□□□□ -0.79
RNF40-209ENST00000566703 WFDC1Q9HC57 220 aa10.11□□□□□ -0.79
RNF40-209ENST00000566703 RPH3ALQ9UNE2 315 aa10.11□□□□□ -0.79
RNF40-209ENST00000566703 INAFM2P0DMQ5 153 aa10.1□□□□□ -0.79
RNF40-209ENST00000566703 GCSHP23434 173 aa10.1□□□□□ -0.79
RNF40-209ENST00000566703 LINC01556Q5JQF7 62 aa10.1□□□□□ -0.79
RNF40-209ENST00000566703 OR10G9Q8NGN4 311 aa10.1□□□□□ -0.79
RNF40-209ENST00000566703 OR10G7Q8NGN6 311 aa10.1□□□□□ -0.79
RNF40-209ENST00000566703 ASB13Q8WXK3 278 aa10.1□□□□□ -0.79
RNF40-209ENST00000566703 FRZBQ92765 325 aa10.1□□□□□ -0.79
RNF40-209ENST00000566703 PTH2Q96A98 100 aa10.1□□□□□ -0.79
RNF40-209ENST00000566703 TRAV8-1A0A0A6YYK1 113 aa10.09□□□□□ -0.79
RNF40-209ENST00000566703 LOC100131303A0A0U1RQF7 123 aa10.09□□□□□ -0.79
RNF40-209ENST00000566703 TRBV6-4A0A1B0GX49 114 aa10.09□□□□□ -0.79
RNF40-209ENST00000566703 FBLL1A6NHQ2 334 aaKnown RBP10.09□□□□□ -0.79
RNF40-209ENST00000566703 IBA57-AS1B1ANH7 110 aa10.09□□□□□ -0.79
RNF40-209ENST00000566703 F6UZH7 168 aa10.09□□□□□ -0.79
RNF40-209ENST00000566703 TAAR5O14804 337 aa10.09□□□□□ -0.79
RNF40-209ENST00000566703 RS1O15537 224 aa10.09□□□□□ -0.79
RNF40-209ENST00000566703 EIF3GO75821 320 aaKnown RBP eCLIP10.09□□□□□ -0.79
RNF40-209ENST00000566703 PPT1P50897 306 aa10.09□□□□□ -0.79
RNF40-209ENST00000566703 RAB2AP61019 212 aa10.09□□□□□ -0.79
RNF40-209ENST00000566703 NHLRC2Q8NBF2 726 aa10.09□□□□□ -0.79
RNF40-209ENST00000566703 SUN5Q8TC36 379 aa10.09□□□□□ -0.79
RNF40-209ENST00000566703 PRADC1Q9BSG0 188 aa10.09□□□□□ -0.79
RNF40-209ENST00000566703 TRAV8-6A0A0B4J262 113 aa10.08□□□□□ -0.8
RNF40-209ENST00000566703 A6NHS1 94 aa10.08□□□□□ -0.8
RNF40-209ENST00000566703 K7EQM0 130 aa10.08□□□□□ -0.8
RNF40-209ENST00000566703 ZNF876PQ49A33 203 aa10.08□□□□□ -0.8
RNF40-209ENST00000566703 SLC25A29Q8N8R3 303 aa10.08□□□□□ -0.8
RNF40-209ENST00000566703 C5orf17Q8NAS9 161 aa10.08□□□□□ -0.8
RNF40-209ENST00000566703 OR2G3Q8NGZ4 309 aa10.08□□□□□ -0.8
RNF40-209ENST00000566703 NTN5Q8WTR8 489 aaPredicted RBP10.08□□□□□ -0.8
RNF40-209ENST00000566703 LRCOL1A6NCL2 159 aa10.07□□□□□ -0.8
RNF40-209ENST00000566703 STAG3L2P0CL84 134 aa10.07□□□□□ -0.8
RNF40-209ENST00000566703 STAG3L3P0CL85 134 aa10.07□□□□□ -0.8
RNF40-209ENST00000566703 CDC34P49427 236 aaPredicted RBP10.07□□□□□ -0.8
RNF40-209ENST00000566703 GNG5P63218 68 aa10.07□□□□□ -0.8
RNF40-209ENST00000566703 RHOHQ15669 191 aa10.07□□□□□ -0.8
RNF40-209ENST00000566703 CFAP126Q5VTH2 177 aa10.07□□□□□ -0.8
RNF40-209ENST00000566703 HMGB3O15347 200 aaKnown RBP10.06□□□□□ -0.8
RNF40-209ENST00000566703 PSCAO43653 123 aa10.06□□□□□ -0.8
RNF40-209ENST00000566703 MBP02144 154 aa10.06□□□□□ -0.8
RNF40-209ENST00000566703 TCRAP04437 139 aa10.06□□□□□ -0.8
RNF40-209ENST00000566703 ARL14EPLP0DKL9 152 aa10.06□□□□□ -0.8
RNF40-209ENST00000566703 SERF2P84101 59 aa10.06□□□□□ -0.8
RNF40-209ENST00000566703 LELP1Q5T871 98 aa10.06□□□□□ -0.8
RNF40-209ENST00000566703 Q5VSD8 79 aa10.06□□□□□ -0.8
RNF40-209ENST00000566703 C9orf85Q96MD7 179 aa10.06□□□□□ -0.8
RNF40-209ENST00000566703 PSMG3Q9BT73 122 aaPredicted RBP10.06□□□□□ -0.8
RNF40-209ENST00000566703 TMEM70Q9BUB7 260 aa10.06□□□□□ -0.8
RNF40-209ENST00000566703 SH3BGRL3Q9H299 93 aa10.06□□□□□ -0.8
RNF40-209ENST00000566703 PSG8Q9UQ74 426 aa10.06□□□□□ -0.8
RNF40-209ENST00000566703 ZNF80P51504 273 aaPredicted RBP10.05□□□□□ -0.8
RNF40-209ENST00000566703 SMUG1Q53HV7 270 aa10.05□□□□□ -0.8
RNF40-209ENST00000566703 SAPCD1Q5SSQ6 148 aa10.05□□□□□ -0.8
RNF40-209ENST00000566703 RAB24Q969Q5 203 aa10.05□□□□□ -0.8
RNF40-209ENST00000566703 SGK494Q96LW2 274 aa10.05□□□□□ -0.8
RNF40-209ENST00000566703 C11orf21Q9P2W6 132 aa10.05□□□□□ -0.8
RNF40-209ENST00000566703 EPDR1Q9UM22 224 aa10.05□□□□□ -0.8
RNF40-209ENST00000566703 IGLV5-52A0A0A0MRZ9 124 aa10.04□□□□□ -0.8
RNF40-209ENST00000566703 GCGP01275 180 aa10.04□□□□□ -0.8
RNF40-209ENST00000566703 MGST1P10620 155 aaKnown RBP10.04□□□□□ -0.8
RNF40-209ENST00000566703 GCHFRP30047 84 aa10.04□□□□□ -0.8
RNF40-209ENST00000566703 SUMO1P63165 101 aaKnown RBP10.04□□□□□ -0.8
RNF40-209ENST00000566703 FLI1Q01543 452 aaPredicted RBP10.04□□□□□ -0.8
RNF40-209ENST00000566703 OR10J3Q5JRS4 329 aa10.04□□□□□ -0.8
RNF40-209ENST00000566703 PIK3CD-AS1Q5SR53 167 aa10.04□□□□□ -0.8
RNF40-209ENST00000566703 DPPA3Q6W0C5 159 aa10.04□□□□□ -0.8
RNF40-209ENST00000566703 ATP6V0E2Q8NHE4 81 aa10.04□□□□□ -0.8
RNF40-209ENST00000566703 GTSF1LQ9H1H1 148 aa10.04□□□□□ -0.8
RNF40-209ENST00000566703 TMEM167BQ9NRX6 74 aa10.04□□□□□ -0.8
RNF40-209ENST00000566703 PGPEP1LA6NFU8 196 aa10.03□□□□□ -0.8
RNF40-209ENST00000566703 FAM229AH3BQW9 127 aa10.03□□□□□ -0.8
RNF40-209ENST00000566703 IGLV2-11P01706 119 aa10.03□□□□□ -0.8
RNF40-209ENST00000566703 ZFP69Q49AA0 526 aa10.03□□□□□ -0.8
RNF40-209ENST00000566703 AQP10Q96PS8 301 aa10.03□□□□□ -0.8
RNF40-209ENST00000566703 TM2D2Q9BX73 214 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms