RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 H2BFSP57053 126 aa8.14□□□□□ -1.11
UBR1-206ENST00000566493 OR4C5Q8NGB2 326 aa8.14□□□□□ -1.11
UBR1-206ENST00000566493 TMED6Q8WW62 240 aa8.14□□□□□ -1.11
UBR1-206ENST00000566493 RASL10AQ92737 203 aa8.14□□□□□ -1.11
UBR1-206ENST00000566493 ZNF479Q96JC4 524 aa8.14□□□□□ -1.11
UBR1-206ENST00000566493 TXNDC17Q9BRA2 123 aa8.14□□□□□ -1.11
UBR1-206ENST00000566493 MBD2Q9UBB5 411 aa8.14□□□□□ -1.11
UBR1-206ENST00000566493 RPH3ALQ9UNE2 315 aa8.14□□□□□ -1.11
UBR1-206ENST00000566493 A0A1W2PPV4 95 aa8.13□□□□□ -1.11
UBR1-206ENST00000566493 C9JCJ5 164 aa8.13□□□□□ -1.11
UBR1-206ENST00000566493 ACOT6Q3I5F7 207 aaPredicted RBP8.13□□□□□ -1.11
UBR1-206ENST00000566493 CDPF1Q6NVV7 123 aa8.13□□□□□ -1.11
UBR1-206ENST00000566493 MARVELD1Q9BSK0 173 aa8.13□□□□□ -1.11
UBR1-206ENST00000566493 TNFRSF18Q9Y5U5 241 aa8.13□□□□□ -1.11
UBR1-206ENST00000566493 TRAV4A0A0B4J268 109 aa8.12□□□□□ -1.11
UBR1-206ENST00000566493 TRAV21A0A0B4J279 112 aa8.12□□□□□ -1.11
UBR1-206ENST00000566493 M0R2P5 195 aa8.12□□□□□ -1.11
UBR1-206ENST00000566493 EIF4EBP3O60516 100 aaPredicted RBP8.12□□□□□ -1.11
UBR1-206ENST00000566493 DEFA1P59665 94 aa8.12□□□□□ -1.11
UBR1-206ENST00000566493 DEFA3P59666 94 aa8.12□□□□□ -1.11
UBR1-206ENST00000566493 TDRG1Q3Y452 100 aa8.12□□□□□ -1.11
UBR1-206ENST00000566493 PQLC2Q6ZP29 291 aa8.12□□□□□ -1.11
UBR1-206ENST00000566493 GOLT1AQ6ZVE7 132 aa8.12□□□□□ -1.11
UBR1-206ENST00000566493 SH2D6Q7Z4S9 175 aa8.12□□□□□ -1.11
UBR1-206ENST00000566493 MSRB1Q9NZV6 116 aa8.12□□□□□ -1.11
UBR1-206ENST00000566493 EPM2AB3EWF7 344 aa8.11□□□□□ -1.11
UBR1-206ENST00000566493 GNRH2O43555 120 aa8.11□□□□□ -1.11
UBR1-206ENST00000566493 EIF3GO75821 320 aaKnown RBP eCLIP8.11□□□□□ -1.11
UBR1-206ENST00000566493 FUSP35637 526 aaKnown RBP eCLIP8.11□□□□□ -1.11
UBR1-206ENST00000566493 IFITM3Q01628 133 aa8.11□□□□□ -1.11
UBR1-206ENST00000566493 WFDC10BQ8IUB3 73 aa8.11□□□□□ -1.11
UBR1-206ENST00000566493 ARL6IP6Q8N6S5 226 aa8.11□□□□□ -1.11
UBR1-206ENST00000566493 KCNS1Q96KK3 526 aa8.11□□□□□ -1.11
UBR1-206ENST00000566493 SDF2L1Q9HCN8 221 aa8.11□□□□□ -1.11
UBR1-206ENST00000566493 TREM1Q9NP99 234 aa8.11□□□□□ -1.11
UBR1-206ENST00000566493 A0A087WTM6 91 aa8.1□□□□□ -1.11
UBR1-206ENST00000566493 IGHV3-16A0A0C4DH30 117 aa8.1□□□□□ -1.11
UBR1-206ENST00000566493 CRYGDP07320 174 aa8.1□□□□□ -1.11
UBR1-206ENST00000566493 DNAH10OSP0CZ25 163 aa8.1□□□□□ -1.11
UBR1-206ENST00000566493 C10orf126Q8N4M7 172 aa8.1□□□□□ -1.11
UBR1-206ENST00000566493 NHLRC2Q8NBF2 726 aa8.1□□□□□ -1.11
UBR1-206ENST00000566493 ASB13Q8WXK3 278 aa8.1□□□□□ -1.11
UBR1-206ENST00000566493 NDFIP1Q9BT67 221 aa8.1□□□□□ -1.11
UBR1-206ENST00000566493 F6UZH7 168 aa8.09□□□□□ -1.11
UBR1-206ENST00000566493 TYMSP04818 313 aa8.09□□□□□ -1.11
UBR1-206ENST00000566493 PPT1P50897 306 aa8.09□□□□□ -1.11
UBR1-206ENST00000566493 OR10G9Q8NGN4 311 aa8.09□□□□□ -1.11
UBR1-206ENST00000566493 OR10G7Q8NGN6 311 aa8.09□□□□□ -1.11
UBR1-206ENST00000566493 WFDC1Q9HC57 220 aa8.09□□□□□ -1.11
UBR1-206ENST00000566493 TRAV8-1A0A0A6YYK1 113 aa8.08□□□□□ -1.12
UBR1-206ENST00000566493 SERTM2A0A1B0GWG4 89 aa8.08□□□□□ -1.12
UBR1-206ENST00000566493 FBLL1A6NHQ2 334 aaKnown RBP8.08□□□□□ -1.12
UBR1-206ENST00000566493 K7EQM0 130 aa8.08□□□□□ -1.12
UBR1-206ENST00000566493 HMGB3O15347 200 aaKnown RBP8.08□□□□□ -1.12
UBR1-206ENST00000566493 PSCAO43653 123 aa8.08□□□□□ -1.12
UBR1-206ENST00000566493 RAB2AP61019 212 aa8.08□□□□□ -1.12
UBR1-206ENST00000566493 KRTAP4-8Q9BYQ9 185 aa8.08□□□□□ -1.12
UBR1-206ENST00000566493 TRAV8-6A0A0B4J262 113 aa8.07□□□□□ -1.12
UBR1-206ENST00000566493 IGHV3-38A0A0C4DH36 116 aa8.07□□□□□ -1.12
UBR1-206ENST00000566493 LOC100131303A0A0U1RQF7 123 aa8.07□□□□□ -1.12
UBR1-206ENST00000566493 PFN1P07737 140 aaKnown RBP8.07□□□□□ -1.12
UBR1-206ENST00000566493 GATA1P15976 413 aaPredicted RBP8.07□□□□□ -1.12
UBR1-206ENST00000566493 CDC34P49427 236 aaPredicted RBP8.07□□□□□ -1.12
UBR1-206ENST00000566493 TIRAPP58753 221 aa8.07□□□□□ -1.12
UBR1-206ENST00000566493 GNG5P63218 68 aa8.07□□□□□ -1.12
UBR1-206ENST00000566493 TVP23CQ96ET8 276 aa8.07□□□□□ -1.12
UBR1-206ENST00000566493 SGK494Q96LW2 274 aa8.07□□□□□ -1.12
UBR1-206ENST00000566493 PRADC1Q9BSG0 188 aa8.07□□□□□ -1.12
UBR1-206ENST00000566493 TAAR5O14804 337 aa8.06□□□□□ -1.12
UBR1-206ENST00000566493 CIDEAO60543 219 aa8.06□□□□□ -1.12
UBR1-206ENST00000566493 ARL14EPLP0DKL9 152 aa8.06□□□□□ -1.12
UBR1-206ENST00000566493 GCSHP23434 173 aa8.06□□□□□ -1.12
UBR1-206ENST00000566493 ZNF876PQ49A33 203 aa8.06□□□□□ -1.12
UBR1-206ENST00000566493 ZFP69Q49AA0 526 aa8.06□□□□□ -1.12
UBR1-206ENST00000566493 FRZBQ92765 325 aa8.06□□□□□ -1.12
UBR1-206ENST00000566493 GCGP01275 180 aa8.05□□□□□ -1.12
UBR1-206ENST00000566493 TCRAP04437 139 aa8.05□□□□□ -1.12
UBR1-206ENST00000566493 STAG3L2P0CL84 134 aa8.05□□□□□ -1.12
UBR1-206ENST00000566493 STAG3L3P0CL85 134 aa8.05□□□□□ -1.12
UBR1-206ENST00000566493 INAFM2P0DMQ5 153 aa8.05□□□□□ -1.12
UBR1-206ENST00000566493 XGP55808 180 aa8.05□□□□□ -1.12
UBR1-206ENST00000566493 KRTAP10-1P60331 282 aa8.05□□□□□ -1.12
UBR1-206ENST00000566493 RHOHQ15669 191 aa8.05□□□□□ -1.12
UBR1-206ENST00000566493 OR10J3Q5JRS4 329 aa8.05□□□□□ -1.12
UBR1-206ENST00000566493 SLC25A29Q8N8R3 303 aa8.05□□□□□ -1.12
UBR1-206ENST00000566493 C5orf17Q8NAS9 161 aa8.05□□□□□ -1.12
UBR1-206ENST00000566493 HSD17B11Q8NBQ5 300 aa8.05□□□□□ -1.12
UBR1-206ENST00000566493 IGHV3-73A0A0B4J1V6 119 aa8.04□□□□□ -1.12
UBR1-206ENST00000566493 TRBV6-4A0A1B0GX49 114 aa8.04□□□□□ -1.12
UBR1-206ENST00000566493 RS1O15537 224 aa8.04□□□□□ -1.12
UBR1-206ENST00000566493 MBP02144 154 aa8.04□□□□□ -1.12
UBR1-206ENST00000566493 GCHFRP30047 84 aa8.04□□□□□ -1.12
UBR1-206ENST00000566493 SMUG1Q53HV7 270 aa8.04□□□□□ -1.12
UBR1-206ENST00000566493 LINC01556Q5JQF7 62 aa8.04□□□□□ -1.12
UBR1-206ENST00000566493 CFAP126Q5VTH2 177 aa8.04□□□□□ -1.12
UBR1-206ENST00000566493 OR2G3Q8NGZ4 309 aa8.04□□□□□ -1.12
UBR1-206ENST00000566493 RAB24Q969Q5 203 aa8.04□□□□□ -1.12
UBR1-206ENST00000566493 TMEM167BQ9NRX6 74 aa8.04□□□□□ -1.12
UBR1-206ENST00000566493 PSG8Q9UQ74 426 aa8.04□□□□□ -1.12
UBR1-206ENST00000566493 IGLV5-52A0A0A0MRZ9 124 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms