RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 IFI27L1Q96BM0 104 aa10.11□□□□□ -0.79
LINC00563-201ENST00000566370 AP1S3Q96PC3 154 aa10.11□□□□□ -0.79
LINC00563-201ENST00000566370 DPH3P1Q9H4G8 78 aa10.11□□□□□ -0.79
LINC00563-201ENST00000566370 GOLT1BQ9Y3E0 138 aa10.11□□□□□ -0.79
LINC00563-201ENST00000566370 CFAP46Q8IYW2 2715 aa10.1□□□□□ -0.79
LINC00563-201ENST00000566370 SCGB2A2Q13296 93 aa10.1□□□□□ -0.79
LINC00563-201ENST00000566370 LINC00173Q6ZV60 143 aa10.1□□□□□ -0.79
LINC00563-201ENST00000566370 WFDC3Q8IUB2 231 aa10.1□□□□□ -0.79
LINC00563-201ENST00000566370 PEMTQ9UBM1 199 aa10.1□□□□□ -0.79
LINC00563-201ENST00000566370 USP9XQ93008 2570 aaPredicted RBP10.1□□□□□ -0.79
LINC00563-201ENST00000566370 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
LINC00563-201ENST00000566370 K7EMI3 77 aa10.09□□□□□ -0.79
LINC00563-201ENST00000566370 ATP5LO75964 103 aa10.09□□□□□ -0.79
LINC00563-201ENST00000566370 SMIM17P0DL12 118 aa10.09□□□□□ -0.79
LINC00563-201ENST00000566370 EVI2AP22794 236 aa10.09□□□□□ -0.79
LINC00563-201ENST00000566370 ANXA2RQ3ZCQ2 193 aa10.09□□□□□ -0.79
LINC00563-201ENST00000566370 Q8N2B8 174 aa10.09□□□□□ -0.79
LINC00563-201ENST00000566370 DEFB125Q8N687 156 aa10.09□□□□□ -0.79
LINC00563-201ENST00000566370 OR1N2Q8NGR9 330 aa10.09□□□□□ -0.79
LINC00563-201ENST00000566370 DCANP1Q8TF63 244 aa10.09□□□□□ -0.79
LINC00563-201ENST00000566370 MYO18BQ8IUG5 2567 aa10.09□□□□□ -0.79
LINC00563-201ENST00000566370 ANKRD17O75179 2603 aaKnown RBP10.09□□□□□ -0.79
LINC00563-201ENST00000566370 C7orf71A4D174 169 aa10.08□□□□□ -0.8
LINC00563-201ENST00000566370 KLLNB2CW77 178 aa10.08□□□□□ -0.8
LINC00563-201ENST00000566370 M0R381 172 aa10.08□□□□□ -0.8
LINC00563-201ENST00000566370 G0S2P27469 103 aa10.08□□□□□ -0.8
LINC00563-201ENST00000566370 SYNJ2BPP57105 145 aa10.08□□□□□ -0.8
LINC00563-201ENST00000566370 KRTAP10-9P60411 292 aa10.08□□□□□ -0.8
LINC00563-201ENST00000566370 PRR9Q5T870 116 aa10.08□□□□□ -0.8
LINC00563-201ENST00000566370 ZNF575Q86XF7 245 aa10.08□□□□□ -0.8
LINC00563-201ENST00000566370 USP24Q9UPU5 2620 aa10.08□□□□□ -0.8
LINC00563-201ENST00000566370 IGHV4OR15-8A0A075B7B6 117 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 A0A087WW49 117 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 F6UB75 175 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 K7EQG2 157 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 HOXD3P31249 432 aaPredicted RBP10.07□□□□□ -0.8
LINC00563-201ENST00000566370 LAGE3Q14657 143 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 LINC00469Q8N7U9 141 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 SYT8Q8NBV8 401 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 PRRC2AP48634 2157 aaKnown RBP10.07□□□□□ -0.8
LINC00563-201ENST00000566370 CR1P17927 2039 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 TRAV2A0A0B4J234 112 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 hDV102S1A0JD36 115 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 LINC01549A6NIU2 74 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 LINC01619G3V211 115 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 TCAPO15273 167 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 SRD5A1P18405 259 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 TFPI2P48307 235 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 MAJINQ3KP22 176 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 ORMDL2Q53FV1 153 aa10.07□□□□□ -0.8
LINC00563-201ENST00000566370 A0A096LNJ9 63 aa10.06□□□□□ -0.8
LINC00563-201ENST00000566370 A0A0J9YX75 114 aa10.06□□□□□ -0.8
LINC00563-201ENST00000566370 ZNF688P0C7X2 276 aa10.06□□□□□ -0.8
LINC00563-201ENST00000566370 C12orf54Q6X4T0 127 aa10.06□□□□□ -0.8
LINC00563-201ENST00000566370 FOXI2Q6ZQN5 318 aa10.06□□□□□ -0.8
LINC00563-201ENST00000566370 C4orf3Q8WVX3 66 aa10.06□□□□□ -0.8
LINC00563-201ENST00000566370 SCRT2Q9NQ03 307 aa10.06□□□□□ -0.8
LINC00563-201ENST00000566370 RELNP78509 3460 aa10.06□□□□□ -0.8
LINC00563-201ENST00000566370 SPG11Q96JI7 2443 aa10.05□□□□□ -0.8
LINC00563-201ENST00000566370 ZNF462Q96JM2 2506 aa10.05□□□□□ -0.8
LINC00563-201ENST00000566370 PRSS1P07477 247 aa10.05□□□□□ -0.8
LINC00563-201ENST00000566370 MGPP08493 103 aa10.05□□□□□ -0.8
LINC00563-201ENST00000566370 C10orf99Q6UWK7 81 aa10.05□□□□□ -0.8
LINC00563-201ENST00000566370 WFDC12Q8WWY7 111 aa10.05□□□□□ -0.8
LINC00563-201ENST00000566370 SMIM2Q9BVW6 85 aa10.05□□□□□ -0.8
LINC00563-201ENST00000566370 NXPH4O95158 308 aa10.04□□□□□ -0.8
LINC00563-201ENST00000566370 CD7P09564 240 aa10.04□□□□□ -0.8
LINC00563-201ENST00000566370 CDKN1BP46527 198 aa10.04□□□□□ -0.8
LINC00563-201ENST00000566370 KHDC1LQ5JSQ8 128 aa10.04□□□□□ -0.8
LINC00563-201ENST00000566370 NRACQ8N912 160 aa10.04□□□□□ -0.8
LINC00563-201ENST00000566370 TMEM158Q8WZ71 300 aa10.04□□□□□ -0.8
LINC00563-201ENST00000566370 TRGV11A0A075B6L2 103 aa10.03□□□□□ -0.8
LINC00563-201ENST00000566370 COX8AP10176 69 aa10.03□□□□□ -0.8
LINC00563-201ENST00000566370 SUMO2P61956 95 aaKnown RBP10.03□□□□□ -0.8
LINC00563-201ENST00000566370 TCTEX1D4Q5JR98 221 aa10.03□□□□□ -0.8
LINC00563-201ENST00000566370 DYNLRB2Q8TF09 96 aa10.03□□□□□ -0.8
LINC00563-201ENST00000566370 DUX5Q96PT3 197 aa10.03□□□□□ -0.8
LINC00563-201ENST00000566370 FLNCQ14315 2725 aa10.02□□□□□ -0.81
LINC00563-201ENST00000566370 TRAV12-3A0A0B4J271 114 aa10.02□□□□□ -0.81
LINC00563-201ENST00000566370 J3QKU1 62 aa10.02□□□□□ -0.81
LINC00563-201ENST00000566370 NUDT3O95989 172 aa10.02□□□□□ -0.81
LINC00563-201ENST00000566370 C14orf178Q8N769 122 aaPredicted RBP10.02□□□□□ -0.81
LINC00563-201ENST00000566370 FAM208BQ5VWN6 2430 aa10.02□□□□□ -0.81
LINC00563-201ENST00000566370 IGLV2-18A0A075B6J9 118 aa10.01□□□□□ -0.81
LINC00563-201ENST00000566370 IGHV1OR15-1A0A075B7D0 117 aa10.01□□□□□ -0.81
LINC00563-201ENST00000566370 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.01□□□□□ -0.81
LINC00563-201ENST00000566370 GNRH2O43555 120 aa10.01□□□□□ -0.81
LINC00563-201ENST00000566370 RNASE3P12724 160 aaKnown RBP10.01□□□□□ -0.81
LINC00563-201ENST00000566370 GATA1P15976 413 aaPredicted RBP10.01□□□□□ -0.81
LINC00563-201ENST00000566370 HINT1P49773 126 aaPredicted RBP10.01□□□□□ -0.81
LINC00563-201ENST00000566370 DEFB1P60022 68 aa10.01□□□□□ -0.81
LINC00563-201ENST00000566370 C18orf15Q96N68 181 aa10.01□□□□□ -0.81
LINC00563-201ENST00000566370 UBR5O95071 2799 aaPredicted RBP10.01□□□□□ -0.81
LINC00563-201ENST00000566370 TRAV26-2A0A0B4J265 109 aa10□□□□□ -0.81
LINC00563-201ENST00000566370 DPM2O94777 84 aa10□□□□□ -0.81
LINC00563-201ENST00000566370 RPL32P62910 135 aaKnown RBP10□□□□□ -0.81
LINC00563-201ENST00000566370 KRTAP1-3Q8IUG1 177 aa10□□□□□ -0.81
LINC00563-201ENST00000566370 OR9G4Q8NGQ1 327 aa10□□□□□ -0.81
LINC00563-201ENST00000566370 CD5LO43866 347 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms