RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 NUTF2P61970 127 aaKnown RBP14.04□□□□□ -0.16
CSPG4P13-201ENST00000565545 SPINK13Q1W4C9 94 aa14.04□□□□□ -0.16
CSPG4P13-201ENST00000565545 GFI1BQ5VTD9 330 aa14.04□□□□□ -0.16
CSPG4P13-201ENST00000565545 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P13-201ENST00000565545 FAM210BQ96KR6 192 aa14.04□□□□□ -0.16
CSPG4P13-201ENST00000565545 HIGD1CA8MV81 97 aa14.03□□□□□ -0.16
CSPG4P13-201ENST00000565545 M0R2Z0 102 aa14.03□□□□□ -0.16
CSPG4P13-201ENST00000565545 NUP35Q8NFH5 326 aa14.03□□□□□ -0.16
CSPG4P13-201ENST00000565545 KCNS1Q96KK3 526 aa14.03□□□□□ -0.16
CSPG4P13-201ENST00000565545 C20orf144Q9BQM9 153 aa14.03□□□□□ -0.16
CSPG4P13-201ENST00000565545 IGKV3D-20A0A0C4DH25 116 aa14.02□□□□□ -0.17
CSPG4P13-201ENST00000565545 K7EIL1 84 aa14.02□□□□□ -0.17
CSPG4P13-201ENST00000565545 ZNF324O75467 553 aaPredicted RBP14.02□□□□□ -0.17
CSPG4P13-201ENST00000565545 TYMSP04818 313 aa14.02□□□□□ -0.17
CSPG4P13-201ENST00000565545 RAB5AP20339 215 aa14.02□□□□□ -0.17
CSPG4P13-201ENST00000565545 TCL1AP56279 114 aa14.02□□□□□ -0.17
CSPG4P13-201ENST00000565545 KIR3DS1Q14943 382 aa14.02□□□□□ -0.17
CSPG4P13-201ENST00000565545 COX19Q49B96 90 aa14.02□□□□□ -0.17
CSPG4P13-201ENST00000565545 GTSF1Q8WW33 167 aa14.02□□□□□ -0.17
CSPG4P13-201ENST00000565545 C11orf21Q9P2W6 132 aa14.02□□□□□ -0.17
CSPG4P13-201ENST00000565545 TRAV12-3A0A0B4J271 114 aa14.01□□□□□ -0.17
CSPG4P13-201ENST00000565545 MORN3Q6PF18 240 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P13-201ENST00000565545 TRAV12-2A0A075B6T6 113 aa14□□□□□ -0.17
CSPG4P13-201ENST00000565545 TMSB15BA0A087X1C1 80 aa14□□□□□ -0.17
CSPG4P13-201ENST00000565545 CRXO43186 299 aaPredicted RBP14□□□□□ -0.17
CSPG4P13-201ENST00000565545 GZMBP10144 247 aa14□□□□□ -0.17
CSPG4P13-201ENST00000565545 TDRG1Q3Y452 100 aa14□□□□□ -0.17
CSPG4P13-201ENST00000565545 DNLZQ5SXM8 178 aa14□□□□□ -0.17
CSPG4P13-201ENST00000565545 RASL11AQ6T310 242 aa14□□□□□ -0.17
CSPG4P13-201ENST00000565545 FAM159AQ6UWV7 190 aa14□□□□□ -0.17
CSPG4P13-201ENST00000565545 ATP5L2Q7Z4Y8 100 aa14□□□□□ -0.17
CSPG4P13-201ENST00000565545 INSP01308 110 aa13.99□□□□□ -0.17
CSPG4P13-201ENST00000565545 IGLC6P0CF74 106 aa13.99□□□□□ -0.17
CSPG4P13-201ENST00000565545 ANXA2RQ3ZCQ2 193 aa13.99□□□□□ -0.17
CSPG4P13-201ENST00000565545 FER1L6-AS1Q8NA97 138 aa13.99□□□□□ -0.17
CSPG4P13-201ENST00000565545 BORCS7Q96B45 105 aa13.99□□□□□ -0.17
CSPG4P13-201ENST00000565545 SRD5A3Q9H8P0 318 aa13.99□□□□□ -0.17
CSPG4P13-201ENST00000565545 NAGKQ9UJ70 344 aa13.99□□□□□ -0.17
CSPG4P13-201ENST00000565545 F2Z2F3 143 aa13.98□□□□□ -0.17
CSPG4P13-201ENST00000565545 FXYD7P58549 80 aa13.98□□□□□ -0.17
CSPG4P13-201ENST00000565545 EGFEM1PQ0D2K5 195 aa13.98□□□□□ -0.17
CSPG4P13-201ENST00000565545 Q6ZQT7 251 aa13.98□□□□□ -0.17
CSPG4P13-201ENST00000565545 ZNF575Q86XF7 245 aa13.98□□□□□ -0.17
CSPG4P13-201ENST00000565545 PGLYRP4Q96LB8 373 aa13.98□□□□□ -0.17
CSPG4P13-201ENST00000565545 C1QTNF4Q9BXJ3 329 aa13.98□□□□□ -0.17
CSPG4P13-201ENST00000565545 KMT2CQ8NEZ4 4911 aaKnown RBP13.97□□□□□ -0.17
CSPG4P13-201ENST00000565545 IGHV1OR15-1A0A075B7D0 117 aa13.97□□□□□ -0.17
CSPG4P13-201ENST00000565545 A0A1B0GUT8 65 aa13.97□□□□□ -0.17
CSPG4P13-201ENST00000565545 A0A1B0GW15 77 aa13.97□□□□□ -0.17
CSPG4P13-201ENST00000565545 MED14OSP0DP75 135 aa13.97□□□□□ -0.17
CSPG4P13-201ENST00000565545 CTRLP40313 264 aa13.97□□□□□ -0.17
CSPG4P13-201ENST00000565545 RPS10P46783 165 aaKnown RBP13.97□□□□□ -0.17
CSPG4P13-201ENST00000565545 Q8N1Y9 231 aa13.97□□□□□ -0.17
CSPG4P13-201ENST00000565545 DEFB125Q8N687 156 aa13.97□□□□□ -0.17
CSPG4P13-201ENST00000565545 LINC00467Q9BRT7 94 aa13.97□□□□□ -0.17
CSPG4P13-201ENST00000565545 WFDC10AQ9H1F0 79 aa13.97□□□□□ -0.17
CSPG4P13-201ENST00000565545 GRIFINA4D1Z8 144 aa13.96□□□□□ -0.17
CSPG4P13-201ENST00000565545 OR5AL1P0C617 328 aa13.96□□□□□ -0.17
CSPG4P13-201ENST00000565545 ASIPP42127 132 aa13.96□□□□□ -0.17
CSPG4P13-201ENST00000565545 RIGQ13278 110 aa13.96□□□□□ -0.17
CSPG4P13-201ENST00000565545 MUC21Q5SSG8 566 aa13.96□□□□□ -0.17
CSPG4P13-201ENST00000565545 WDR73Q6P4I2 378 aa13.96□□□□□ -0.17
CSPG4P13-201ENST00000565545 TMEM256Q8N2U0 113 aa13.96□□□□□ -0.17
CSPG4P13-201ENST00000565545 SSBP4Q9BWG4 385 aaPredicted RBP13.96□□□□□ -0.17
CSPG4P13-201ENST00000565545 S100A8P05109 93 aa13.95□□□□□ -0.18
CSPG4P13-201ENST00000565545 KRTAP10-11P60412 298 aa13.95□□□□□ -0.18
CSPG4P13-201ENST00000565545 LYZL1Q6UWQ5 148 aa13.95□□□□□ -0.18
CSPG4P13-201ENST00000565545 WWC2-AS2Q96NR7 200 aa13.95□□□□□ -0.18
CSPG4P13-201ENST00000565545 GNB1LQ9BYB4 327 aa13.95□□□□□ -0.18
CSPG4P13-201ENST00000565545 TRGV11A0A075B6L2 103 aa13.94□□□□□ -0.18
CSPG4P13-201ENST00000565545 A0A1B0GXF2 115 aa13.94□□□□□ -0.18
CSPG4P13-201ENST00000565545 SNAI2O43623 268 aa13.94□□□□□ -0.18
CSPG4P13-201ENST00000565545 SPINK4O60575 86 aa13.94□□□□□ -0.18
CSPG4P13-201ENST00000565545 MT-ND6P03923 174 aa13.94□□□□□ -0.18
CSPG4P13-201ENST00000565545 S100A4P26447 101 aaKnown RBP13.94□□□□□ -0.18
CSPG4P13-201ENST00000565545 HBBP68871 147 aa13.94□□□□□ -0.18
CSPG4P13-201ENST00000565545 MRPL54Q6P161 138 aaKnown RBP13.94□□□□□ -0.18
CSPG4P13-201ENST00000565545 CNFNQ9BYD5 112 aa13.94□□□□□ -0.18
CSPG4P13-201ENST00000565545 DNAH3Q8TD57 4116 aa13.93□□□□□ -0.18
CSPG4P13-201ENST00000565545 RPL35AP18077 110 aaKnown RBP13.93□□□□□ -0.18
CSPG4P13-201ENST00000565545 CACNG7P62955 275 aa13.93□□□□□ -0.18
CSPG4P13-201ENST00000565545 TPPP3Q9BW30 176 aa13.93□□□□□ -0.18
CSPG4P13-201ENST00000565545 XCL2Q9UBD3 114 aa13.93□□□□□ -0.18
CSPG4P13-201ENST00000565545 GNRH2O43555 120 aa13.92□□□□□ -0.18
CSPG4P13-201ENST00000565545 RBMY1A1P0DJD3 496 aaKnown RBP13.92□□□□□ -0.18
CSPG4P13-201ENST00000565545 RBMY1CP0DJD4 496 aa13.92□□□□□ -0.18
CSPG4P13-201ENST00000565545 RBMY1FQ15415 496 aaKnown RBP13.92□□□□□ -0.18
CSPG4P13-201ENST00000565545 LINC01587Q99440 93 aa13.92□□□□□ -0.18
CSPG4P13-201ENST00000565545 CSTL1Q9H114 145 aa13.92□□□□□ -0.18
CSPG4P13-201ENST00000565545 TENM3Q9P273 2699 aa13.92□□□□□ -0.18
CSPG4P13-201ENST00000565545 LOC102724200A0A096LPH7 203 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P13-201ENST00000565545 HLA-DQA1P01909 254 aa13.91□□□□□ -0.18
CSPG4P13-201ENST00000565545 ARMS2P0C7Q2 107 aa13.91□□□□□ -0.18
CSPG4P13-201ENST00000565545 B9D2Q9BPU9 175 aa13.91□□□□□ -0.18
CSPG4P13-201ENST00000565545 SCRT2Q9NQ03 307 aa13.91□□□□□ -0.18
CSPG4P13-201ENST00000565545 GOLT1BQ9Y3E0 138 aa13.91□□□□□ -0.18
CSPG4P13-201ENST00000565545 IGHV4-4A0A075B6R2 117 aa13.9□□□□□ -0.18
CSPG4P13-201ENST00000565545 KIR2DL5BA0A0G2JN68 375 aa13.9□□□□□ -0.18
CSPG4P13-201ENST00000565545 KIR2DL5BA0A0G2JPC4 375 aa13.9□□□□□ -0.18
CSPG4P13-201ENST00000565545 C1orf196B1AJZ1 125 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms