RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 PSPNO60542 156 aa4.08□□□□□ -1.76
SMG1-211ENST00000565324 C8orf49Q96NF6 230 aa4.08□□□□□ -1.76
SMG1-211ENST00000565324 MCRIP2Q9BUT9 160 aaKnown RBP4.08□□□□□ -1.76
SMG1-211ENST00000565324 CSRP2Q16527 193 aa4.08□□□□□ -1.76
SMG1-211ENST00000565324 MST1LQ2TV78 715 aa4.08□□□□□ -1.76
SMG1-211ENST00000565324 ZNRF2Q8NHG8 242 aa4.08□□□□□ -1.76
SMG1-211ENST00000565324 FOXI1Q12951 378 aa4.08□□□□□ -1.76
SMG1-211ENST00000565324 SPINK13Q1W4C9 94 aa4.08□□□□□ -1.76
SMG1-211ENST00000565324 C2orf16Q68DN1 1984 aa4.08□□□□□ -1.76
SMG1-211ENST00000565324 TRAV3A0A0B4J244 114 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 A0A1B0GUS0 222 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 F5H768 121 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 LHBP01229 141 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 ANGP03950 147 aaKnown RBP4.07□□□□□ -1.76
SMG1-211ENST00000565324 ZFP36L1Q07352 338 aaKnown RBP4.07□□□□□ -1.76
SMG1-211ENST00000565324 LINC01356Q8N9X3 169 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 COX7B2Q8TF08 81 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 OVOL3O00110 214 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 ZNF672Q499Z4 452 aaPredicted RBP4.07□□□□□ -1.76
SMG1-211ENST00000565324 AMTNQ6UX39 209 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 ZNF833PQ6ZTB9 187 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 Q9H8V8 135 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 ETDCA0A1B0GVM5 59 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 H3BUX3 64 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 LYPD3O95274 346 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 CFHR1Q03591 330 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 Q6P435 159 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 FGFBP3Q8TAT2 258 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 ZNF747Q9BV97 191 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 SPACA3Q8IXA5 215 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 FAM110DQ8TAY7 271 aaPredicted RBP4.07□□□□□ -1.76
SMG1-211ENST00000565324 G3V4G9 280 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 UBE2AP49459 152 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 DUX4L9Q6RFH8 374 aaPredicted RBP4.07□□□□□ -1.76
SMG1-211ENST00000565324 UBE2E2Q96LR5 201 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 MRPL36Q9P0J6 103 aaKnown RBP4.07□□□□□ -1.76
SMG1-211ENST00000565324 NDUFA4O00483 81 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 PIFOQ8TCI5 191 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 VOPP1Q96AW1 172 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 ZC2HC1AQ96GY0 325 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 PTPRBP23467 1997 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 SORL1Q92673 2214 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 NBASA2RRP1 2371 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 PNRC2Q9NPJ4 139 aaKnown RBP4.07□□□□□ -1.76
SMG1-211ENST00000565324 UBE2E1P51965 193 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 RSPO4Q2I0M5 234 aaPredicted RBP4.07□□□□□ -1.76
SMG1-211ENST00000565324 KLF2Q9Y5W3 355 aaPredicted RBP4.07□□□□□ -1.76
SMG1-211ENST00000565324 EXPH5Q8NEV8 1989 aa4.07□□□□□ -1.76
SMG1-211ENST00000565324 IGLL5B9A064 214 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 MDS2Q8NDY4 140 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 XCL2Q9UBD3 114 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 IGKV1-12A0A0C4DH73 117 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 LINC01619G3V211 115 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 IGKV1D-12P01611 117 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 DAZ2Q13117 558 aaKnown RBP4.06□□□□□ -1.76
SMG1-211ENST00000565324 DAZ4Q86SG3 579 aaKnown RBP4.06□□□□□ -1.76
SMG1-211ENST00000565324 LYPD6BQ8NI32 183 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 DAZ3Q9NR90 486 aaKnown RBP4.06□□□□□ -1.76
SMG1-211ENST00000565324 PRRC2AP48634 2157 aaKnown RBP4.06□□□□□ -1.76
SMG1-211ENST00000565324 NXPH4O95158 308 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 NOTCH4Q99466 2003 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 IGKV1D-17A0A075B6S4 117 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 LYRM9A8MSI8 78 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 H3BRN7 92 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 CGB3P0DN86 165 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 NDUFV3P56181 108 aaKnown RBP4.06□□□□□ -1.76
SMG1-211ENST00000565324 DEFB131AP59861 70 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 Q6ZUT4 128 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 C10orf105Q8TEF2 133 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 IMUPQ9GZP8 106 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 RS1O15537 224 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 IGLC1P0CG04 106 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 ANXA2RQ3ZCQ2 193 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 LGALS9O00182 355 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 CGB7P0DN87 165 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 U3KQE9 123 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 GATA4P43694 442 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 DKK2Q9UBU2 259 aa4.06□□□□□ -1.76
SMG1-211ENST00000565324 NAV3Q8IVL0 2385 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 TRBV10-2A0A0K0K1G8 114 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 NDUFC2-KCTD14E9PQ53 114 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 J3QLI3 93 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 LMO1P25800 156 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 C20orf173Q96LM9 149 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 IGHV1-58A0A0C4DH39 117 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 ATG2AQ2TAZ0 1938 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 TRBV12-3P01733 135 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 SPRR3Q9UBC9 169 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 TRAV26-1A0A087WT03 109 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 IGKV3D-7A0A0C4DH55 119 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 A0A0G2JRQ6 117 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 C4orf48Q5BLP8 95 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 A0A087WV48 116 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 A4D1N5 150 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 COX7A2LO14548 114 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 SPTSSBQ8NFR3 76 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 FXYD5Q96DB9 178 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 SND1-IT1Q9HBX3 110 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 TRAV26-2A0A0B4J265 109 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 DEFB104AQ8WTQ1 72 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms